FFCP PHASE1:Hg19::chr15:39593792..39593816,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:39593792..39593816,- | |||
|description=CAGE_peak_at_chr15:39593792..39593816,- | |||
|id=chr15:39593792..39593816,- | |||
|ontology_enrichment_celltype=CL:0000057!9.31e-24!75;CL:0000055!1.95e-20!180;CL:0002620!7.26e-19!23;CL:0000048!1.99e-12!430;CL:0000723!5.11e-12!436;CL:0000034!1.72e-11!444;CL:0002559!1.34e-10!4;CL:0002334!9.08e-10!12;CL:0000136!1.70e-09!15;CL:0002580!8.62e-09!3;CL:0000346!1.26e-08!3;CL:1000428!1.26e-08!3;CL:0002615!1.97e-08!3;CL:0002579!3.55e-08!3;CL:0002371!1.56e-07!591;CL:0000134!2.20e-07!358;CL:0002320!5.33e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.73e-22;23!CL:0000346;2.61e-12;3!CL:1000428;2.61e-12;3!CL:0002580;6.22e-12;3!CL:0002334;2.55e-11;12!CL:0000057;3.01e-10;73!CL:0002581;1.42e-09;1!CL:0002559;9.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.36e-22,23;CL:0000057,2.86e-22,76;CL:0000346,2.85e-12,3;CL:1000428,2.85e-12,3;CL:0002580,2.85e-12,3;CL:0002334,1.68e-11,12;CL:0002581,1.06e-09,1;CL:0000134,7.54e-08,354;CL:0002559,1.04e-07,5;CL:0002320,1.27e-07,361;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441;CL:0000219,7.85e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.82e-09!5;DOID:450!2.82e-09!5;DOID:66!2.82e-09!5;DOID:423!2.82e-09!5;DOID:0080000!2.82e-09!5;DOID:11722!2.82e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;7.87e-28;5!DOID:450;7.87e-28;5!DOID:66;7.87e-28;5!DOID:423;7.87e-28;5!DOID:0080000;7.87e-28;5!DOID:11722;7.87e-28;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.02e-28,5;DOID:450,6.02e-28,5;DOID:66,6.02e-28,5;DOID:423,6.02e-28,5;DOID:0080000,6.02e-28,5;DOID:11722,6.02e-28,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.16e-16!40;UBERON:0003688!6.31e-15!6;UBERON:0002358!6.31e-15!6;UBERON:0003684!6.31e-15!6;UBERON:0001178!6.31e-15!6;UBERON:0002199!7.24e-14!45;UBERON:0002416!7.24e-14!45;UBERON:0002073!1.34e-10!4;UBERON:0005086!1.34e-10!4;UBERON:0003102!8.85e-09!95;UBERON:0000412!1.26e-08!3;UBERON:0001992!1.26e-08!3;UBERON:0001637!9.53e-08!42;UBERON:0003509!9.53e-08!42;UBERON:0004572!9.53e-08!42;UBERON:0000475!9.67e-08!365;UBERON:0000947!1.66e-07!21;UBERON:0010191!1.66e-07!21;UBERON:0000914!2.96e-07!83;UBERON:0002329!2.96e-07!83;UBERON:0003077!2.96e-07!83;UBERON:0003059!2.96e-07!83;UBERON:0007282!2.96e-07!83;UBERON:0009618!2.96e-07!83;UBERON:0007285!2.96e-07!83;UBERON:0004457!4.86e-07!12;UBERON:0000042!4.86e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.38e-18;41!UBERON:0003102;1.78e-12;50!UBERON:0000412;2.61e-12;3!UBERON:0001992;2.61e-12;3!UBERON:0002199;5.80e-12;46!UBERON:0002416;5.80e-12;46!UBERON:0000310;5.85e-08;10!UBERON:0002073;9.91e-08;5!UBERON:0001443;2.81e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.16e-19,41;UBERON:0002199,7.32e-17,46;UBERON:0002416,7.32e-17,46;UBERON:0000412,2.85e-12,3;UBERON:0001992,2.85e-12,3;UBERON:0003102,1.72e-08,99;UBERON:0000310,4.11e-08,10;UBERON:0002073,1.04e-07,5;UBERON:0005086,1.04e-07,5;UBERON:0001443,2.04e-07,11;UBERON:0002384,2.56e-07,371 | |||
|phase1_expression=1.45342703416445,0.856402095563933,0.986680828671798,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,2.25095607382472,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0.877955241761676,0.612975591598039,0.45071417671979,0,2.33206526395521,2.34913127700424,2.11931901159562,0,2.06105058476878,1.54584324027377,1.48893485065272,0.506328996723799,1.16924406193438,0.757301322732344,2.02509777013059,0.323292113637624,0.710019185033229,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0,0,0,6.25798129319264,0.643240938192885,1.38134921352481,0.464367928031979,0,0.236613600079688,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0.992431231275107,1.68808170616869,1.68396056659844,0.384417447767103,2.04682899626681,0.64341568457443,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.811641507850816,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:39593792..39593816,- | |||
}} |
Latest revision as of 01:10, 25 July 2015
Short description: | p@chr15:39593792..39593816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39593792..39593816, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.36e-22 | 23 |
fibroblast | 2.86e-22 | 76 |
hair follicle dermal papilla cell | 2.85e-12 | 3 |
stem cell of epidermis | 2.85e-12 | 3 |
preadipocyte of the breast | 2.85e-12 | 3 |
preadipocyte | 1.68e-11 | 12 |
perirenal preadipocyte | 1.06e-09 | 1 |
mesenchymal cell | 7.54e-08 | 354 |
hair follicle cell | 1.04e-07 | 5 |
connective tissue cell | 1.27e-07 | 361 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
motile cell | 7.85e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.16e-19 | 41 |
integument | 7.32e-17 | 46 |
integumental system | 7.32e-17 | 46 |
dermal papilla | 2.85e-12 | 3 |
papillary layer of dermis | 2.85e-12 | 3 |
surface structure | 1.72e-08 | 99 |
breast | 4.11e-08 | 10 |
hair follicle | 1.04e-07 | 5 |
hair follicle placode | 1.04e-07 | 5 |
chest | 2.04e-07 | 11 |
connective tissue | 2.56e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.02e-28 | 5 |
myotonic disease | 6.02e-28 | 5 |
muscle tissue disease | 6.02e-28 | 5 |
myopathy | 6.02e-28 | 5 |
muscular disease | 6.02e-28 | 5 |
myotonic dystrophy | 6.02e-28 | 5 |