FFCP PHASE1:Hg19::chr15:39534820..39534834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39534820..39534834,+ | |||
|coexpression_cluster_id=C3482 | |||
|description=CAGE_peak_at_chr15:39534820..39534834,+ | |description=CAGE_peak_at_chr15:39534820..39534834,+ | ||
|id=chr15:39534820..39534834,+ | |id=chr15:39534820..39534834,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.33e-27!23;CL:0000057!1.15e-19!75;CL:0000055!2.25e-14!180;CL:0002371!2.86e-07!591 | |ontology_enrichment_celltype=CL:0002620!2.33e-27!23;CL:0000057!1.15e-19!75;CL:0000055!2.25e-14!180;CL:0002371!2.86e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.01e-38;3!CL:1000428;1.01e-38;3!CL:0002580;3.19e-38;3!CL:0002559;1.02e-23;5!CL:0002615;1.04e-10;3!CL:0002334;2.24e-10;12!CL:1000306;1.70e-08;4!CL:0002547;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.01e-38,3;CL:1000428,1.01e-38,3;CL:0002580,2.18e-38,3;CL:0002559,1.02e-23,5;CL:0002615,1.20e-10,3;CL:0002334,2.03e-10,12;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.80e-18!5;DOID:450!4.80e-18!5;DOID:66!4.80e-18!5;DOID:423!4.80e-18!5;DOID:0080000!4.80e-18!5;DOID:11722!4.80e-18!5 | |ontology_enrichment_disease=DOID:17!4.80e-18!5;DOID:450!4.80e-18!5;DOID:66!4.80e-18!5;DOID:423!4.80e-18!5;DOID:0080000!4.80e-18!5;DOID:11722!4.80e-18!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!2.50e-19!40;UBERON:0002199!9.71e-17!45;UBERON:0002416!9.71e-17!45;UBERON:0003102!5.05e-09!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.01e-38;3!UBERON:0001992;1.01e-38;3!UBERON:0002073;1.02e-23;5!UBERON:0002067;1.15e-13;9!UBERON:0000310;2.98e-12;10!UBERON:0001443;3.13e-11;11!UBERON:0001003;1.37e-08;15!UBERON:0007376;1.37e-08;15!UBERON:0004797;1.70e-08;4!UBERON:0000415;1.70e-08;4!UBERON:0007240;1.70e-08;4!UBERON:0005742;1.70e-08;4!UBERON:0005734;1.70e-08;4!UBERON:0004664;1.70e-08;4!UBERON:0004663;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.01e-38,3;UBERON:0001992,1.01e-38,3;UBERON:0002073,1.02e-23,5;UBERON:0005086,1.02e-23,5;UBERON:0002067,1.15e-13,9;UBERON:0004016,1.15e-13,9;UBERON:0010083,1.15e-13,9;UBERON:0000310,2.66e-12,10;UBERON:0001443,2.83e-11,11;UBERON:0001003,1.37e-08,15;UBERON:0007376,1.37e-08,15;UBERON:0007383,1.37e-08,15;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0004923,2.29e-07,66 | |||
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| ||
|short_description=p@chr15:39534820..39534834,+ | |short_description=p@chr15:39534820..39534834,+ | ||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p@chr15:39534820..39534834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39534820..39534834, + |
Coexpression cluster: | C3482_Fibroblast_Hair_Preadipocyte_Smooth_mesenchymal_Adipocyte_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.01e-38 | 3 |
stem cell of epidermis | 1.01e-38 | 3 |
preadipocyte of the breast | 2.18e-38 | 3 |
hair follicle cell | 1.02e-23 | 5 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
preadipocyte | 2.03e-10 | 12 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.01e-38 | 3 |
papillary layer of dermis | 1.01e-38 | 3 |
hair follicle | 1.02e-23 | 5 |
hair follicle placode | 1.02e-23 | 5 |
dermis | 1.15e-13 | 9 |
dermatome | 1.15e-13 | 9 |
future dermis | 1.15e-13 | 9 |
breast | 2.66e-12 | 10 |
chest | 2.83e-11 | 11 |
skin epidermis | 1.37e-08 | 15 |
outer epithelium | 1.37e-08 | 15 |
enveloping layer of ectoderm | 1.37e-08 | 15 |
artery wall | 1.70e-08 | 4 |
tunica adventitia of artery | 1.70e-08 | 4 |
adventitia | 1.70e-08 | 4 |
tunica adventitia of blood vessel | 1.70e-08 | 4 |
aorta tunica adventitia | 1.70e-08 | 4 |
aorta wall | 1.70e-08 | 4 |
organ component layer | 2.29e-07 | 66 |