FFCP PHASE1:Hg19::chr15:39486389..39486413,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=96bp_to_ENST00000560743_5end | |association_with_transcript=96bp_to_ENST00000560743_5end | ||
|cluster_id=chr15:39486389..39486413,- | |||
|coexpression_cluster_id=C878 | |||
|description=CAGE_peak_1_at_ENST00000560743_5end | |description=CAGE_peak_1_at_ENST00000560743_5end | ||
|id=chr15:39486389..39486413,- | |id=chr15:39486389..39486413,- | ||
|ontology_enrichment_celltype=CL:0000057!3.18e-27!75;CL:0002620!4.65e-22!23;CL:0000055!1.43e-16!180;CL:0002334!9.11e-11!12;CL:0002580!1.56e-09!3;CL:0002615!2.69e-09!3;CL:0002579!3.42e-09!3;CL:0000136!3.24e-08!15;CL:0000197!2.05e-07!6;CL:0000098!2.05e-07!6;CL:0002167!2.05e-07!6;CL:0000723!5.23e-07!436;CL:0002617!6.63e-07!2;CL:0000048!7.93e-07!430 | |ontology_enrichment_celltype=CL:0000057!3.18e-27!75;CL:0002620!4.65e-22!23;CL:0000055!1.43e-16!180;CL:0002334!9.11e-11!12;CL:0002580!1.56e-09!3;CL:0002615!2.69e-09!3;CL:0002579!3.42e-09!3;CL:0000136!3.24e-08!15;CL:0000197!2.05e-07!6;CL:0000098!2.05e-07!6;CL:0002167!2.05e-07!6;CL:0000723!5.23e-07!436;CL:0002617!6.63e-07!2;CL:0000048!7.93e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.58e-24;12!CL:0002580;1.82e-19;3!CL:0002615;7.36e-19;3!CL:0002579;2.23e-18;3!CL:0000136;1.62e-16;13!CL:0002620;1.73e-15;23!CL:0002617;1.38e-13;2!CL:0000057;3.79e-13;73!CL:0000197;2.91e-09;6!CL:0000098;2.91e-09;6!CL:0002167;2.91e-09;6!CL:0002616;1.85e-07;1!CL:0002581;4.88e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.13e-27,76;CL:0002334,5.04e-24,12;CL:0002580,1.76e-19,3;CL:0002615,5.97e-19,3;CL:0002579,1.03e-18,3;CL:0002620,1.95e-15,23;CL:0000136,2.76e-14,15;CL:0002617,1.38e-13,2;CL:0000197,2.75e-09,6;CL:0000098,2.75e-09,6;CL:0002167,2.75e-09,6;CL:0002616,1.74e-07,1;CL:0002581,4.34e-07,1;CL:0000134,7.26e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.09e-13!5;DOID:450!2.09e-13!5;DOID:66!2.09e-13!5;DOID:423!2.09e-13!5;DOID:0080000!2.09e-13!5;DOID:11722!2.09e-13!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.73e-11;5!DOID:450;1.73e-11;5!DOID:66;1.73e-11;5!DOID:423;1.73e-11;5!DOID:0080000;1.73e-11;5!DOID:11722;1.73e-11;5!DOID:2513;1.85e-07;1!DOID:3369;4.88e-07;1!DOID:4235;4.88e-07;1!DOID:3571;4.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.73e-11,5;DOID:450,1.73e-11,5;DOID:66,1.73e-11,5;DOID:423,1.73e-11,5;DOID:0080000,1.73e-11,5;DOID:11722,1.73e-11,5;DOID:2513,1.97e-07,1;DOID:4235,3.62e-07,1;DOID:3369,4.08e-07,1;DOID:3571,4.89e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!8.68e-17!6;UBERON:0002358!8.68e-17!6;UBERON:0003684!8.68e-17!6;UBERON:0001178!8.68e-17!6;UBERON:0002097!2.02e-16!40;UBERON:0002199!4.63e-14!45;UBERON:0002416!4.63e-14!45;UBERON:0003102!2.94e-09!95;UBERON:0004457!6.08e-08!12;UBERON:0000042!6.08e-08!12;UBERON:0000310!4.20e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.94e-35;6!UBERON:0002358;1.94e-35;6!UBERON:0003684;1.94e-35;6!UBERON:0001178;1.94e-35;6!UBERON:0004457;1.78e-23;9!UBERON:0000042;1.78e-23;9!UBERON:0000310;1.54e-15;10!UBERON:0001443;4.19e-14;11!UBERON:0005406;8.02e-13;2!UBERON:0002097;1.81e-08;41!UBERON:0002199;7.73e-08;46!UBERON:0002416;7.73e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.25e-36,6;UBERON:0002358,7.25e-36,6;UBERON:0003684,7.25e-36,6;UBERON:0001178,7.25e-36,6;UBERON:0004457,1.09e-17,12;UBERON:0000042,1.09e-17,12;UBERON:0000310,1.52e-15,10;UBERON:0001443,4.14e-14,11;UBERON:0005406,6.71e-13,2;UBERON:0002097,2.52e-10,41;UBERON:0002199,4.83e-09,46;UBERON:0002416,4.83e-09,46;UBERON:0003102,1.82e-07,99;UBERON:0002384,4.74e-07,371 | |||
|phase1_expression=15.0793054794562,17.7703434829516,9.02108186214215,22.0161256376887,1.78784437770915,6.97870819280295,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.794455084879313,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,2.22540236350701,0,0,0,0,0,0,1.22595118319608,1.20190447125277,0,2.51145489964407,8.75585294156127,3.81477422087211,0.300091096084402,0.92747276314595,2.31876486041066,6.32797311527405,0.675105328965065,2.63079913935236,0.757301322732344,4.32634523618807,0.323292113637624,1.06502877754984,0.906768884048762,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.45579603071565,1.42743191037729,0.946214490203608,2.81139395982512,0.902838299183157,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,11.9091747753013,42.9693525206575,9.26178311629143,1.92208723883551,33.7726784384024,1.93024705372329,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=15.0793054794562,17.7703434829516,9.02108186214215,22.0161256376887,1.78784437770915,6.97870819280295,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.794455084879313,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,2.22540236350701,0,0,0,0,0,0,1.22595118319608,1.20190447125277,0,2.51145489964407,8.75585294156127,3.81477422087211,0.300091096084402,0.92747276314595,2.31876486041066,6.32797311527405,0.675105328965065,2.63079913935236,0.757301322732344,4.32634523618807,0.323292113637624,1.06502877754984,0.906768884048762,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.45579603071565,1.42743191037729,0.946214490203608,2.81139395982512,0.902838299183157,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,11.9091747753013,42.9693525206575,9.26178311629143,1.92208723883551,33.7726784384024,1.93024705372329,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000560743 | |short_description=p1@ENST00000560743 | ||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p1@ENST00000560743 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000560743_5end |
Coexpression cluster: | C878_Preadipocyte_Adipocyte_Mast_CD14_CD8_CD4_Fibroblast |
Association with transcript: | 96bp_to_ENST00000560743_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.13e-27 | 76 |
preadipocyte | 5.04e-24 | 12 |
preadipocyte of the breast | 1.76e-19 | 3 |
adipocyte of omentum tissue | 5.97e-19 | 3 |
omentum preadipocyte | 1.03e-18 | 3 |
skin fibroblast | 1.95e-15 | 23 |
fat cell | 2.76e-14 | 15 |
adipocyte of breast | 1.38e-13 | 2 |
receptor cell | 2.75e-09 | 6 |
sensory epithelial cell | 2.75e-09 | 6 |
olfactory epithelial cell | 2.75e-09 | 6 |
perirenal adipocyte cell | 1.74e-07 | 1 |
perirenal preadipocyte | 4.34e-07 | 1 |
mesenchymal cell | 7.26e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.25e-36 | 6 |
peritoneum | 7.25e-36 | 6 |
abdominal cavity | 7.25e-36 | 6 |
visceral peritoneum | 7.25e-36 | 6 |
cavity lining | 1.09e-17 | 12 |
serous membrane | 1.09e-17 | 12 |
breast | 1.52e-15 | 10 |
chest | 4.14e-14 | 11 |
perirenal fat | 6.71e-13 | 2 |
skin of body | 2.52e-10 | 41 |
integument | 4.83e-09 | 46 |
integumental system | 4.83e-09 | 46 |
surface structure | 1.82e-07 | 99 |
connective tissue | 4.74e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.73e-11 | 5 |
myotonic disease | 1.73e-11 | 5 |
muscle tissue disease | 1.73e-11 | 5 |
myopathy | 1.73e-11 | 5 |
muscular disease | 1.73e-11 | 5 |
myotonic dystrophy | 1.73e-11 | 5 |
basal cell carcinoma | 1.97e-07 | 1 |
spindle cell sarcoma | 3.62e-07 | 1 |
peripheral primitive neuroectodermal tumor | 4.08e-07 | 1 |
liver cancer | 4.89e-07 | 1 |