FFCP PHASE1:Hg19::chr15:39410918..39410942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000560197_5end | |association_with_transcript=-4bp_to_ENST00000560197_5end | ||
|cluster_id=chr15:39410918..39410942,- | |||
|coexpression_cluster_id=C3481 | |coexpression_cluster_id=C3481 | ||
|description=CAGE_peak_1_at_ENST00000560197_5end | |description=CAGE_peak_1_at_ENST00000560197_5end | ||
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|ontology_enrichment_celltype=CL:0000055!9.67e-22!180;CL:0000057!1.28e-20!75;CL:0000144!3.96e-13!625;CL:0002139!6.28e-13!24;CL:0002371!4.26e-12!591;CL:0000071!5.73e-12!18;CL:0002546!5.73e-12!18;CL:0000222!6.28e-12!119;CL:0002620!1.35e-10!23;CL:0000548!1.57e-10!679;CL:0000004!1.57e-10!679;CL:0000255!1.57e-10!679;CL:0000012!2.85e-10!682;CL:0000220!2.74e-09!246;CL:0002321!4.75e-09!248;CL:0000213!8.36e-09!57;CL:0000215!8.36e-09!57;CL:0002334!1.69e-07!12;CL:0000003!1.86e-07!722;CL:0000115!4.23e-07!35;CL:0002078!6.53e-07!44 | |ontology_enrichment_celltype=CL:0000055!9.67e-22!180;CL:0000057!1.28e-20!75;CL:0000144!3.96e-13!625;CL:0002139!6.28e-13!24;CL:0002371!4.26e-12!591;CL:0000071!5.73e-12!18;CL:0002546!5.73e-12!18;CL:0000222!6.28e-12!119;CL:0002620!1.35e-10!23;CL:0000548!1.57e-10!679;CL:0000004!1.57e-10!679;CL:0000255!1.57e-10!679;CL:0000012!2.85e-10!682;CL:0000220!2.74e-09!246;CL:0002321!4.75e-09!248;CL:0000213!8.36e-09!57;CL:0000215!8.36e-09!57;CL:0002334!1.69e-07!12;CL:0000003!1.86e-07!722;CL:0000115!4.23e-07!35;CL:0002078!6.53e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.35e-30;23!CL:1000306;5.85e-14;4!CL:0002547;5.85e-14;4!CL:0000057;1.78e-12;73!CL:0002580;3.01e-11;3!CL:0002334;9.15e-10;12!CL:0000197;6.47e-09;6!CL:0000098;6.47e-09;6!CL:0002167;6.47e-09;6 | |ontology_enrichment_celltype_v019=CL:0002620;1.35e-30;23!CL:1000306;5.85e-14;4!CL:0002547;5.85e-14;4!CL:0000057;1.78e-12;73!CL:0002580;3.01e-11;3!CL:0002334;9.15e-10;12!CL:0000197;6.47e-09;6!CL:0000098;6.47e-09;6!CL:0002167;6.47e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.16e-35,76;CL:0002620,1.82e-30,23;CL:1000306,5.23e-14,4;CL:0002547,5.23e-14,4;CL:0002580,2.68e-11,3;CL:0002334,7.58e-10,12;CL:0000197,3.30e-09,6;CL:0000098,3.30e-09,6;CL:0002167,3.30e-09,6;CL:0000136,2.79e-07,15;CL:0002320,4.93e-07,361;CL:0000134,8.44e-07,354 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!8.98e-08!5;DOID:450!8.98e-08!5;DOID:66!8.98e-08!5;DOID:423!8.98e-08!5;DOID:0080000!8.98e-08!5;DOID:11722!8.98e-08!5 | |ontology_enrichment_disease=DOID:17!8.98e-08!5;DOID:450!8.98e-08!5;DOID:66!8.98e-08!5;DOID:423!8.98e-08!5;DOID:0080000!8.98e-08!5;DOID:11722!8.98e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.73e-18;5!DOID:450;3.73e-18;5!DOID:66;3.73e-18;5!DOID:423;3.73e-18;5!DOID:0080000;3.73e-18;5!DOID:11722;3.73e-18;5 | |ontology_enrichment_disease_v019=DOID:17;3.73e-18;5!DOID:450;3.73e-18;5!DOID:66;3.73e-18;5!DOID:423;3.73e-18;5!DOID:0080000;3.73e-18;5!DOID:11722;3.73e-18;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.76e-18,5;DOID:450,3.76e-18,5;DOID:66,3.76e-18,5;DOID:423,3.76e-18,5;DOID:0080000,3.76e-18,5;DOID:11722,3.76e-18,5 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.73e-12!18;UBERON:0004638!5.73e-12!18;UBERON:0004852!5.73e-12!18;UBERON:0004872!4.80e-11!84;UBERON:0000055!7.62e-11!69;UBERON:0000487!1.61e-10!22;UBERON:0001981!1.89e-10!60;UBERON:0007500!1.89e-10!60;UBERON:0004537!1.89e-10!60;UBERON:0006965!1.89e-10!60;UBERON:0002049!2.34e-10!79;UBERON:0007798!2.34e-10!79;UBERON:0006914!9.12e-10!25;UBERON:0004535!5.57e-09!110;UBERON:0001009!2.02e-08!113;UBERON:0002097!3.68e-08!40;UBERON:0003688!6.48e-08!6;UBERON:0002358!6.48e-08!6;UBERON:0003684!6.48e-08!6;UBERON:0001178!6.48e-08!6;UBERON:0002199!2.15e-07!45;UBERON:0002416!2.15e-07!45;UBERON:0003914!6.66e-07!118 | |ontology_enrichment_uberon=UBERON:0001986!5.73e-12!18;UBERON:0004638!5.73e-12!18;UBERON:0004852!5.73e-12!18;UBERON:0004872!4.80e-11!84;UBERON:0000055!7.62e-11!69;UBERON:0000487!1.61e-10!22;UBERON:0001981!1.89e-10!60;UBERON:0007500!1.89e-10!60;UBERON:0004537!1.89e-10!60;UBERON:0006965!1.89e-10!60;UBERON:0002049!2.34e-10!79;UBERON:0007798!2.34e-10!79;UBERON:0006914!9.12e-10!25;UBERON:0004535!5.57e-09!110;UBERON:0001009!2.02e-08!113;UBERON:0002097!3.68e-08!40;UBERON:0003688!6.48e-08!6;UBERON:0002358!6.48e-08!6;UBERON:0003684!6.48e-08!6;UBERON:0001178!6.48e-08!6;UBERON:0002199!2.15e-07!45;UBERON:0002416!2.15e-07!45;UBERON:0003914!6.66e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.85e-14;4!UBERON:0000415;5.85e-14;4!UBERON:0007240;5.85e-14;4!UBERON:0005742;5.85e-14;4!UBERON:0005734;5.85e-14;4!UBERON:0004664;5.85e-14;4!UBERON:0004663;5.85e-14;4!UBERON:0002097;9.32e-13;41!UBERON:0002199;8.32e-11;46!UBERON:0002416;8.32e-11;46!UBERON:0003688;2.37e-09;6!UBERON:0002358;2.37e-09;6!UBERON:0003684;2.37e-09;6!UBERON:0001178;2.37e-09;6!UBERON:0003102;7.70e-08;50!UBERON:0005406;2.70e-07;2!UBERON:0000947;5.14e-07;21!UBERON:0010191;5.14e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0004797;5.85e-14;4!UBERON:0000415;5.85e-14;4!UBERON:0007240;5.85e-14;4!UBERON:0005742;5.85e-14;4!UBERON:0005734;5.85e-14;4!UBERON:0004664;5.85e-14;4!UBERON:0004663;5.85e-14;4!UBERON:0002097;9.32e-13;41!UBERON:0002199;8.32e-11;46!UBERON:0002416;8.32e-11;46!UBERON:0003688;2.37e-09;6!UBERON:0002358;2.37e-09;6!UBERON:0003684;2.37e-09;6!UBERON:0001178;2.37e-09;6!UBERON:0003102;7.70e-08;50!UBERON:0005406;2.70e-07;2!UBERON:0000947;5.14e-07;21!UBERON:0010191;5.14e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.28e-17,41;UBERON:0002199,2.85e-15,46;UBERON:0002416,2.85e-15,46;UBERON:0000415,5.23e-14,4;UBERON:0007240,5.23e-14,4;UBERON:0005742,5.23e-14,4;UBERON:0005734,5.23e-14,4;UBERON:0004664,5.23e-14,4;UBERON:0004663,5.23e-14,4;UBERON:0003688,1.87e-09,6;UBERON:0002358,1.87e-09,6;UBERON:0003684,1.87e-09,6;UBERON:0001178,1.87e-09,6;UBERON:0004797,5.15e-08,7;UBERON:0002384,7.11e-08,371;UBERON:0003102,1.20e-07,99;UBERON:0005406,1.65e-07,2;UBERON:0000947,5.05e-07,21;UBERON:0010191,5.05e-07,21 | |||
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| ||
|short_description=p1@ENST00000560197 | |short_description=p1@ENST00000560197 | ||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p1@ENST00000560197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000560197_5end |
Coexpression cluster: | C3481_liposarcoma_mesothelioma_Fibroblast_Ewing_Preadipocyte_Olfactory_Adipocyte |
Association with transcript: | -4bp_to_ENST00000560197_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.16e-35 | 76 |
skin fibroblast | 1.82e-30 | 23 |
fibroblast of tunica adventitia of artery | 5.23e-14 | 4 |
fibroblast of the aortic adventitia | 5.23e-14 | 4 |
preadipocyte of the breast | 2.68e-11 | 3 |
preadipocyte | 7.58e-10 | 12 |
receptor cell | 3.30e-09 | 6 |
sensory epithelial cell | 3.30e-09 | 6 |
olfactory epithelial cell | 3.30e-09 | 6 |
fat cell | 2.79e-07 | 15 |
connective tissue cell | 4.93e-07 | 361 |
mesenchymal cell | 8.44e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.28e-17 | 41 |
integument | 2.85e-15 | 46 |
integumental system | 2.85e-15 | 46 |
artery wall | 5.23e-14 | 4 |
tunica adventitia of artery | 5.23e-14 | 4 |
adventitia | 5.23e-14 | 4 |
tunica adventitia of blood vessel | 5.23e-14 | 4 |
aorta tunica adventitia | 5.23e-14 | 4 |
aorta wall | 5.23e-14 | 4 |
omentum | 1.87e-09 | 6 |
peritoneum | 1.87e-09 | 6 |
abdominal cavity | 1.87e-09 | 6 |
visceral peritoneum | 1.87e-09 | 6 |
blood vessel layer | 5.15e-08 | 7 |
connective tissue | 7.11e-08 | 371 |
surface structure | 1.20e-07 | 99 |
perirenal fat | 1.65e-07 | 2 |
aorta | 5.05e-07 | 21 |
aortic system | 5.05e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.76e-18 | 5 |
myotonic disease | 3.76e-18 | 5 |
muscle tissue disease | 3.76e-18 | 5 |
myopathy | 3.76e-18 | 5 |
muscular disease | 3.76e-18 | 5 |
myotonic dystrophy | 3.76e-18 | 5 |