FFCP PHASE1:Hg19::chr15:38920201..38920211,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:38920201..38920211,+ | |||
|coexpression_cluster_id=C1737 | |||
|description=CAGE_peak_at_chr15:38920201..38920211,+ | |description=CAGE_peak_at_chr15:38920201..38920211,+ | ||
|id=chr15:38920201..38920211,+ | |id=chr15:38920201..38920211,+ | ||
|ontology_enrichment_celltype=CL:0000242!4.73e-28!2;CL:0000312!7.88e-12!5;CL:0000240!5.20e-10!6;CL:0000311!5.20e-10!6;CL:0000079!5.20e-10!6;CL:0000237!5.20e-10!6;CL:0000036!5.20e-10!6;CL:0000357!5.20e-10!6;CL:0000114!5.20e-10!6;CL:0002535!3.82e-08!2;CL:0000362!1.00e-07!8 | |ontology_enrichment_celltype=CL:0000242!4.73e-28!2;CL:0000312!7.88e-12!5;CL:0000240!5.20e-10!6;CL:0000311!5.20e-10!6;CL:0000079!5.20e-10!6;CL:0000237!5.20e-10!6;CL:0000036!5.20e-10!6;CL:0000357!5.20e-10!6;CL:0000114!5.20e-10!6;CL:0002535!3.82e-08!2;CL:0000362!1.00e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.52e-50;2!CL:0002535;3.52e-50;2!CL:0000242;3.52e-50;2!CL:0000312;4.66e-21;5!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0000362;2.31e-12;9!CL:0002159;1.93e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-50,2;CL:0002535,4.52e-50,2;CL:0000312,4.21e-21,5;CL:0000240,7.67e-18,6;CL:0000311,7.67e-18,6;CL:0000079,7.67e-18,6;CL:0000237,7.67e-18,6;CL:0000036,7.67e-18,6;CL:0000357,7.67e-18,6;CL:0000114,7.67e-18,6;CL:0000362,2.19e-12,9;CL:0002159,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.66e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.15e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0001896!2.24e-40!3;UBERON:0005290!2.24e-40!3;UBERON:0010096!2.24e-40!3;UBERON:0004733!9.69e-28!12;UBERON:0002028!9.69e-28!12;UBERON:0007277!9.69e-28!12;UBERON:0002298!5.57e-27!8;UBERON:0004732!1.29e-25!13;UBERON:0003076!3.25e-22!15;UBERON:0003057!3.25e-22!15;UBERON:0002370!5.37e-14!4;UBERON:0005058!5.37e-14!4;UBERON:0009113!5.37e-14!4;UBERON:0003295!5.37e-14!4;UBERON:0005562!5.37e-14!4;UBERON:0001049!7.15e-14!57;UBERON:0005068!7.15e-14!57;UBERON:0006241!7.15e-14!57;UBERON:0007135!7.15e-14!57;UBERON:0002616!2.20e-13!59;UBERON:0001872!1.95e-11!5;UBERON:0000955!3.41e-11!69;UBERON:0006238!3.41e-11!69;UBERON:0003351!1.21e-09!6;UBERON:0001017!2.43e-09!82;UBERON:0003075!5.44e-09!86;UBERON:0007284!5.44e-09!86;UBERON:0000153!5.98e-09!129;UBERON:0007811!5.98e-09!129;UBERON:0005743!7.03e-09!86;UBERON:0002346!1.47e-08!90;UBERON:0004177!2.15e-08!7;UBERON:0007023!2.36e-08!115;UBERON:0006955!3.82e-08!2;UBERON:0004801!3.82e-08!2;UBERON:0000073!5.58e-08!94;UBERON:0001016!5.58e-08!94;UBERON:0002680!6.79e-07!9;UBERON:0001895!6.79e-07!9;UBERON:0010092!6.79e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.52e-50;2!UBERON:0004801;3.52e-50;2!UBERON:0000002;8.34e-18;6!UBERON:0001560;8.34e-18;6!UBERON:0001003;5.74e-08;15!UBERON:0007376;5.74e-08;15!UBERON:0000995;3.48e-07;17!UBERON:0003975;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.52e-50,2;UBERON:0004801,4.52e-50,2;UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6;UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p@chr15:38920201..38920211,+ | |short_description=p@chr15:38920201..38920211,+ | ||
}} | }} |
Latest revision as of 01:08, 25 July 2015
Short description: | p@chr15:38920201..38920211, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:38920201..38920211, + |
Coexpression cluster: | C1737_argyrophil_merkel_neuroblastoma_gastrointestinal_carcinoid_smallcell_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-50 | 2 |
epithelial cell of cervix | 4.52e-50 | 2 |
keratinocyte | 4.21e-21 | 5 |
stratified squamous epithelial cell | 7.67e-18 | 6 |
keratin accumulating cell | 7.67e-18 | 6 |
stratified epithelial cell | 7.67e-18 | 6 |
keratinizing barrier epithelial cell | 7.67e-18 | 6 |
epithelial fate stem cell | 7.67e-18 | 6 |
stratified epithelial stem cell | 7.67e-18 | 6 |
surface ectodermal cell | 7.67e-18 | 6 |
epidermal cell | 2.19e-12 | 9 |
general ecto-epithelial cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.52e-50 | 2 |
cervix epithelium | 4.52e-50 | 2 |
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.15e-21 | 5 |