FFCP PHASE1:Hg19::chr15:30217398..30217403,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:30217398..30217403,+
|short_description=p@chr15:30217398..30217403,+
|description=CAGE_peak_at_chr15:30217398..30217403,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:30217398..30217403,+ | |||
|description=CAGE_peak_at_chr15:30217398..30217403,+ | |||
|id=chr15:30217398..30217403,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.95e-30!254;CL:0002321!1.40e-14!248;CL:0000548!2.20e-14!679;CL:0000004!2.20e-14!679;CL:0000255!2.20e-14!679;CL:0000012!5.19e-14!682;CL:0000220!6.76e-14!246;CL:0000076!7.64e-13!62;CL:0000003!2.09e-09!722;CL:0000223!3.52e-09!59;CL:0002076!1.33e-08!43;CL:0002202!1.34e-08!9;CL:0002632!1.34e-08!9;CL:0002368!1.05e-07!13;CL:0000077!1.28e-07!19;CL:0000063!2.51e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.85e-11;9!CL:0002632;1.85e-11;9!CL:0002368;2.62e-10;13!CL:0002328;8.76e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.58e-16,253;CL:0002202,1.28e-11,9;CL:0002632,1.28e-11,9;CL:0002368,2.17e-10,13;CL:0002328,5.18e-09,3;CL:0000076,7.92e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.51e-20!106;DOID:0050687!3.40e-19!143;DOID:162!1.63e-17!235;DOID:14566!1.93e-16!239;DOID:1749!8.55e-11!14;DOID:193!2.72e-08!29;DOID:120!4.93e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.98e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.41e-11,143;DOID:162,4.15e-11,235;DOID:305,1.03e-10,106;DOID:14566,1.15e-10,239;DOID:1749,4.38e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000060!5.39e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000485;7.19e-10;7!UBERON:0004815;8.76e-09;3!UBERON:0002031;8.76e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.18e-09,3;UBERON:0002031,5.18e-09,3;UBERON:0000485,9.67e-08,9;UBERON:0005153,6.85e-07,37 | |||
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| ||
|short_description=p@chr15:30217398..30217403,+ | |||
}} | }} |
Latest revision as of 00:39, 25 July 2015
Short description: | p@chr15:30217398..30217403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:30217398..30217403, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.58e-16 | 253 |
epithelial cell of tracheobronchial tree | 1.28e-11 | 9 |
epithelial cell of lower respiratory tract | 1.28e-11 | 9 |
respiratory epithelial cell | 2.17e-10 | 13 |
bronchial epithelial cell | 5.18e-09 | 3 |
squamous epithelial cell | 7.92e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.18e-09 | 3 |
epithelium of bronchus | 5.18e-09 | 3 |
simple columnar epithelium | 9.67e-08 | 9 |
epithelial bud | 6.85e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.41e-11 | 143 |
cancer | 4.15e-11 | 235 |
carcinoma | 1.03e-10 | 106 |
disease of cellular proliferation | 1.15e-10 | 239 |
squamous cell carcinoma | 4.38e-07 | 14 |