FFCP PHASE1:Hg19::chr14:96343250..96343261,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:96343250..96343261,+ to FFCP PHASE1:Hg19::chr14:96343250..96343261,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=94bp_to_ENST00000554321_5end | |||
|cluster_id=chr14:96343250..96343261,+ | |||
|coexpression_cluster_id=C3469 | |||
|description=CAGE_peak_3_at_ENST00000554321_5end | |||
|id=chr14:96343250..96343261,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.68e-16!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.07e-55;5!CL:0002321;4.71e-26;15!CL:0000540;1.61e-17;6!CL:0000404;1.61e-17;6!CL:0000148;1.78e-10;10!CL:0000147;1.25e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.86e-55,5;CL:0000540,1.36e-17,6;CL:0000031,1.36e-17,6;CL:0000404,1.36e-17,6;CL:0000047,2.39e-13,8;CL:0000148,1.42e-10,10;CL:0000541,1.42e-10,10;CL:0000133,2.67e-08,59;CL:0000147,1.06e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000031;1.61e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.68e-62!57;UBERON:0005068!3.68e-62!57;UBERON:0006241!3.68e-62!57;UBERON:0007135!3.68e-62!57;UBERON:0005743!4.96e-58!86;UBERON:0001017!8.57e-56!82;UBERON:0000073!2.99e-54!94;UBERON:0001016!2.99e-54!94;UBERON:0002616!6.93e-53!59;UBERON:0000955!7.32e-46!69;UBERON:0006238!7.32e-46!69;UBERON:0003075!7.86e-45!86;UBERON:0007284!7.86e-45!86;UBERON:0002346!2.25e-42!90;UBERON:0002780!4.03e-39!41;UBERON:0001890!4.03e-39!41;UBERON:0006240!4.03e-39!41;UBERON:0003080!4.85e-38!42;UBERON:0002020!4.86e-37!34;UBERON:0003528!4.86e-37!34;UBERON:0001893!5.71e-37!34;UBERON:0001869!4.59e-36!32;UBERON:0002791!1.08e-34!33;UBERON:0007023!3.93e-29!115;UBERON:0003056!2.18e-28!61;UBERON:0000956!3.82e-27!25;UBERON:0000203!3.82e-27!25;UBERON:0000033!3.74e-26!123;UBERON:0003076!8.88e-26!15;UBERON:0003057!8.88e-26!15;UBERON:0004121!2.89e-25!169;UBERON:0000153!1.79e-24!129;UBERON:0007811!1.79e-24!129;UBERON:0000924!2.04e-24!173;UBERON:0006601!2.04e-24!173;UBERON:0002619!3.68e-24!22;UBERON:0001950!3.81e-23!20;UBERON:0004733!1.08e-22!12;UBERON:0002028!1.08e-22!12;UBERON:0007277!1.08e-22!12;UBERON:0004732!8.92e-21!13;UBERON:0000200!1.47e-16!6;UBERON:0002680!2.58e-15!9;UBERON:0001895!2.58e-15!9;UBERON:0010092!2.58e-15!9;UBERON:0000025!3.75e-14!194;UBERON:0002298!6.94e-13!8;UBERON:0002308!3.07e-11!9;UBERON:0000125!3.07e-11!9;UBERON:0000988!8.99e-10!3;UBERON:0004111!1.78e-09!241;UBERON:0001896!2.28e-09!3;UBERON:0005290!2.28e-09!3;UBERON:0010096!2.28e-09!3;UBERON:0002771!1.29e-08!3;UBERON:0001871!1.40e-08!7;UBERON:0000064!3.22e-08!219;UBERON:0002420!4.29e-08!9;UBERON:0007245!4.29e-08!9;UBERON:0010009!4.29e-08!9;UBERON:0010011!4.29e-08!9;UBERON:0000454!4.29e-08!9;UBERON:0002037!5.71e-08!6;UBERON:0006215!5.71e-08!6;UBERON:0000477!1.24e-07!286;UBERON:0000483!1.82e-07!309;UBERON:0000119!2.68e-07!312;UBERON:0000369!4.16e-07!4;UBERON:0002435!4.16e-07!4;UBERON:0000204!4.16e-07!4;UBERON:0010082!4.16e-07!4;UBERON:0009663!6.29e-07!7;UBERON:0001897!7.53e-07!2;UBERON:0001870!8.46e-07!2;UBERON:0002148!8.96e-07!2;UBERON:0009662!8.96e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;3.26e-12;1!UBERON:0005403;3.26e-12;1!UBERON:0009663;3.91e-07;7!UBERON:0002702;6.42e-07;2!UBERON:0001875;9.80e-07;2!UBERON:0006514;9.80e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,4.81e-12,1;UBERON:0005403,4.81e-12,1;UBERON:0001016,1.08e-10,89;UBERON:0001017,1.03e-09,81;UBERON:0003076,3.15e-07,15;UBERON:0003057,3.15e-07,15;UBERON:0009663,4.57e-07,7;UBERON:0002702,6.07e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,2.12047629314376,2.67246068599892,1.65857688024593,1.7662459561294,2.18986415445498,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,1.52581736317083,0.331737779793674,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,2.25054407851027,2.88832816854191,3.73896304226267,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.488105059607853,0.250381861413,0.573409195690071,0.332787154610557,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0,0,0,0,0,0,0,0,4.02194899506392,0.80057074828547,0,0,1.09189682663981,0,0,0.205116364240755,0.756215088665154,0.553258019713743,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.887821342714695,0,0,0,0,0,0,0,0,0,0,0,0,4.89382077433188,0.460409414939944,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.392616934229891,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0,0.5290268405154,0,0,0,1.64016352285603,0.764859003745869,0,0.101988829741982,0,0.0918948995348449,0,0.151557396436479,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,2.12047629314376,2.67246068599892,1.65857688024593,1.7662459561294,2.18986415445498,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,1.52581736317083,0.331737779793674,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,2.25054407851027,2.88832816854191,3.73896304226267,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.488105059607853,0.250381861413,0.573409195690071,0.332787154610557,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0,0,0,0,0,0,0,0,4.02194899506392,0.80057074828547,0,0,1.09189682663981,0,0,0.205116364240755,0.756215088665154,0.553258019713743,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.887821342714695,0,0,0,0,0,0,0,0,0,0,0,0,4.89382077433188,0.460409414939944,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0.392616934229891,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0,0.5290268405154,0,0,0,1.64016352285603,0.764859003745869,0,0.101988829741982,0,0.0918948995348449,0,0.151557396436479,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p3@ENST00000554321 | |||
}} | }} |
Latest revision as of 00:07, 25 July 2015
Short description: | p3@ENST00000554321 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000554321_5end |
Coexpression cluster: | C3469_pons_iPS_non_H9_diencephalon_teratocarcinoma_HES3GFP |
Association with transcript: | 94bp_to_ENST00000554321_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.86e-55 | 5 |
neuron | 1.36e-17 | 6 |
neuroblast | 1.36e-17 | 6 |
electrically signaling cell | 1.36e-17 | 6 |
neuronal stem cell | 2.39e-13 | 8 |
melanocyte | 1.42e-10 | 10 |
melanoblast | 1.42e-10 | 10 |
neurectodermal cell | 2.67e-08 | 59 |
pigment cell | 1.06e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 4.81e-12 | 1 |
ventral striatum | 4.81e-12 | 1 |
nervous system | 1.08e-10 | 89 |
central nervous system | 1.03e-09 | 81 |
posterior neural tube | 3.15e-07 | 15 |
chordal neural plate | 3.15e-07 | 15 |
telencephalic nucleus | 4.57e-07 | 7 |
middle frontal gyrus | 6.07e-07 | 2 |