FFCP PHASE1:Hg19::chr14:94405820..94405831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:94405820..94405831,- | |||
|coexpression_cluster_id=C373 | |coexpression_cluster_id=C373 | ||
|description=CAGE_peak_at_chr14:94405820..94405831,- | |description=CAGE_peak_at_chr14:94405820..94405831,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.46e-11!5 | |ontology_enrichment_celltype=CL:0002322!1.46e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2!CL:0002231;8.00e-18;3!CL:0000039;2.26e-08;7!CL:0000586;2.26e-08;7 | |ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2!CL:0002231;8.00e-18;3!CL:0000039;2.26e-08;7!CL:0000586;2.26e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2;CL:0002231,8.00e-18,3;CL:0000039,2.18e-08,7;CL:0000586,2.18e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-20;10!UBERON:0005564;1.04e-20;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.04e-20;10!UBERON:0005564;1.04e-20;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | |ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0000473;1.43e-25;8!UBERON:0003101;4.90e-21;22!UBERON:0000079;4.90e-21;22!UBERON:0003135;6.17e-19;11!UBERON:0005156;1.49e-11;59!UBERON:0000990;1.49e-11;59!UBERON:0000991;1.86e-10;21!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0003133;2.65e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0000473;1.43e-25;8!UBERON:0003101;4.90e-21;22!UBERON:0000079;4.90e-21;22!UBERON:0003135;6.17e-19;11!UBERON:0005156;1.49e-11;59!UBERON:0000990;1.49e-11;59!UBERON:0000991;1.86e-10;21!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0003133;2.65e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0000473,1.43e-25,8;UBERON:0003101,4.90e-21,22;UBERON:0000079,4.90e-21,22;UBERON:0003135,6.17e-19,11;UBERON:0005156,2.92e-14,59;UBERON:0000990,2.92e-14,59;UBERON:0000991,1.86e-10,21;UBERON:0009196,1.86e-10,21;UBERON:0009117,1.86e-10,21;UBERON:0005564,1.86e-10,21;UBERON:0003133,3.53e-10,48;UBERON:0004176,4.96e-10,22;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6 | |||
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| ||
|short_description=p@chr14:94405820..94405831,- | |short_description=p@chr14:94405820..94405831,- | ||
}} | }} |
Latest revision as of 23:51, 24 July 2015
Short description: | p@chr14:94405820..94405831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:94405820..94405831, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
epithelial cell of prostate | 8.00e-18 | 3 |
germ line cell | 2.18e-08 | 7 |
germ cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
testis | 1.43e-25 | 8 |
male organism | 4.90e-21 | 22 |
male reproductive system | 4.90e-21 | 22 |
male reproductive organ | 6.17e-19 | 11 |
reproductive structure | 2.92e-14 | 59 |
reproductive system | 2.92e-14 | 59 |
gonad | 1.86e-10 | 21 |
indifferent external genitalia | 1.86e-10 | 21 |
indifferent gonad | 1.86e-10 | 21 |
gonad primordium | 1.86e-10 | 21 |
reproductive organ | 3.53e-10 | 48 |
external genitalia | 4.96e-10 | 22 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |