FFCP PHASE1:Hg19::chr14:85999686..85999701,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:85999686..85999701,+ | |||
|coexpression_cluster_id=C2318 | |||
|description=CAGE_peak_at_chr14:85999686..85999701,+ | |||
|id=chr14:85999686..85999701,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.87e-14!180;CL:0002139!1.14e-11!24;CL:0000213!1.99e-10!57;CL:0000215!1.99e-10!57;CL:0000115!7.47e-10!35;CL:0000057!7.94e-10!75;CL:0000220!1.30e-09!246;CL:0002321!1.48e-09!248;CL:0000222!1.51e-09!119;CL:0002078!5.30e-08!44;CL:0000071!6.53e-08!18;CL:0002546!6.53e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.70e-13;24!CL:0000115;2.61e-09;36!CL:0000071;1.04e-08;18!CL:0002078;4.66e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.81e-13,24;CL:0000115,1.76e-11,36;CL:0000213,2.90e-11,58;CL:0000215,2.90e-11,58;CL:0002078,2.34e-09,45;CL:0000222,5.61e-09,121;CL:0000071,1.00e-08,18;CL:0002546,1.00e-08,18;CL:0002321,1.18e-08,250;CL:0000057,4.10e-08,76 | |||
|ontology_enrichment_development_v019=CL:0002546;1.04e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.95e-19!659;UBERON:0000924!9.40e-15!173;UBERON:0006601!9.40e-15!173;UBERON:0000475!3.15e-14!365;UBERON:0000119!1.02e-13!312;UBERON:0000483!2.41e-13!309;UBERON:0004121!4.60e-13!169;UBERON:0000467!6.14e-13!625;UBERON:0000480!1.07e-12!626;UBERON:0000922!1.64e-12!612;UBERON:0000477!8.54e-12!286;UBERON:0000033!1.68e-11!123;UBERON:0002050!2.25e-11!605;UBERON:0005423!2.25e-11!605;UBERON:0000153!3.29e-11!129;UBERON:0007811!3.29e-11!129;UBERON:0000923!4.39e-11!604;UBERON:0005291!4.39e-11!604;UBERON:0006598!4.39e-11!604;UBERON:0002532!4.39e-11!604;UBERON:0002049!5.95e-10!79;UBERON:0007798!5.95e-10!79;UBERON:0000481!6.25e-10!347;UBERON:0005743!1.29e-09!86;UBERON:0000073!2.02e-09!94;UBERON:0001016!2.02e-09!94;UBERON:0001950!4.13e-09!20;UBERON:0002346!1.05e-08!90;UBERON:0002619!1.13e-08!22;UBERON:0004111!1.14e-08!241;UBERON:0001017!4.65e-08!82;UBERON:0001986!6.53e-08!18;UBERON:0004638!6.53e-08!18;UBERON:0004852!6.53e-08!18;UBERON:0000055!8.45e-08!69;UBERON:0000956!1.09e-07!25;UBERON:0000203!1.09e-07!25;UBERON:0004872!2.10e-07!84;UBERON:0001869!3.88e-07!32;UBERON:0003075!3.89e-07!86;UBERON:0007284!3.89e-07!86;UBERON:0006914!5.07e-07!25;UBERON:0003056!8.95e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.19e-10;20!UBERON:0002619;7.96e-09;22!UBERON:0004638;1.04e-08;18!UBERON:0001986;1.04e-08;18!UBERON:0004852;1.04e-08;18!UBERON:0006914;7.82e-08;25!UBERON:0000956;2.14e-07;25!UBERON:0000203;2.14e-07;25!UBERON:0000487;5.94e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.50e-12,171;UBERON:0000924,1.50e-12,171;UBERON:0006601,1.50e-12,171;UBERON:0000119,9.69e-11,309;UBERON:0000483,1.50e-10,306;UBERON:0001950,4.47e-10,20;UBERON:0002050,1.89e-09,564;UBERON:0002049,3.40e-09,78;UBERON:0007798,3.40e-09,78;UBERON:0002619,4.04e-09,22;UBERON:0010314,6.06e-09,132;UBERON:0004638,1.00e-08,18;UBERON:0001986,1.00e-08,18;UBERON:0004852,1.00e-08,18;UBERON:0000922,1.16e-08,592;UBERON:0005423,1.39e-08,581;UBERON:0000923,1.53e-08,560;UBERON:0010316,1.53e-08,560;UBERON:0005291,1.53e-08,560;UBERON:0006598,1.53e-08,560;UBERON:0010317,1.53e-08,560;UBERON:0002532,1.53e-08,560;UBERON:0006914,9.02e-08,25;UBERON:0000956,1.45e-07,25;UBERON:0000203,1.45e-07,25;UBERON:0004535,3.67e-07,109;UBERON:0004872,4.54e-07,83;UBERON:0000055,5.05e-07,68;UBERON:0000487,5.84e-07,22 | |||
|phase1_expression=1.09007027562334,0.642301571672949,2.81908808191942,2.00146596706261,0.893922188854576,0,2.53299878168311,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0.263766978228454,0.74259811776028,0,2.01697543935533,1.80808358407193,2.19093027116212,1.46379839637152,0.246242116153576,0.204000691244253,0.313454721478088,1.14494394852423,0.273748850145768,0.502170558379211,0.0764134057479513,0,0,0,0,0,2.75826367343678,2.71085326900425,1.84877005083394,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,1.37898272294647,0,0,0.564727018627814,0.545812300115692,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,6.03630773733273,2.30152611318355,1.80719576192283,1.00267582127178,4.34539556882471,4.7717156823066,2.91980922181582,1.03988298880475,1.33037638477538,1.75669571386252,2.48860243445654,1.45718115317017,0.370784442784429,0.324547393654683,0,0.398873881556595,0,0,0,4.77029777680092,5.16140757063675,7.28995053375948,7.91431118693613,5.03399323451887,5.50236083880135,1.46296476575767,13.1792547176358,16.009481820902,23.7651635062916,15.3075140501476,12.1643536914962,28.3111986755877,1.47065232138347,2.43042584364528,11.16246603551,8.98117490504679,6.30624290706604,1.53316637465883,9.49265659568129,5.86245580577303,0,0,1.74437620857014,0,0.886413581652058,2.38336525463794,1.72101972449288,3.54668382198357,3.92474320099615,6.4049397437823,2.96001058100592,4.04574346019696,2.2900814251847,1.63461903113459,2.72443369760877,2.88087962239999,10.3101430006871,0,1.1409436430889,1.19558944441441,1.52664848236894,2.42809416552197,1.54495887372473,1.83738754129404,0.982674538494144,5.47626640231557,8.31602000097437,10.1379441004208,0.910161361938026,1.43723628363248,3.70339450698946,2.00189631795143,1.93944880838928,2.63386572528503,1.5324389789951,10.2161880056486,1.24775401476023,5.202299434977,2.77624605464138,1.05965950579781,3.60109315301283,0.618315175430633,6.69865404118636,5.3973888336161,23.6286865137773,16.4668538722426,3.28163906517349,1.74894807420369,3.23292113637624,11.005297368015,6.7503905812519,0.847802961552438,7.34391242020528,5.72766853240753,9.75135624322613,0.853815942907168,0.662648841607426,3.02104251460748,1.34759371519982,3.28017106138317,0,0,1.28648187638577,0,2.3218396401599,5.0531563716871,1.0647612003586,1.01150814046861,0.964044119533928,0.882351781859152,0.871517776369625,0.474541238222193,0.134831308160164,0.392442930250692,0.38474715694639,22.1446636387394,2.80483547606892,6.5851841813024,1.47008711385542,1.26755034821831,0,2.36315962672562,0,0,4.28919525746314,2.63400684980701,7.86812272803337,1.60846355858609,4.0738915869753,9.44844085399942,0,0,0.927443239800615,4.93116515790451,18.1901724178953,15.2785219150282,23.4012607248556,0,0,0.246217006087397,1.17002132569619,0.891786973732369,2.81201501960331,7.39121364074982,3.26082723657489,10.030554542719,7.55648240136301,0.766765358330422,0,0,0,0,0.12624243342638,2.03193261734941,4.58386110669933,0,5.13217338068116,0.616964956219941,9.61097785100536,0,0.784917590417525,4.79556075716608,2.27348686044945,11.8929978497156,3.57656445851882,2.535908257668,5.05282421511254,5.2003718455683,0.257207374262142,0,0,2.43062589218851,6.51145926469732,0.823240336780769,0.65147236858747,1.77695974371273,1.58390374586686,10.8518175741451,4.35766729300147,7.69792032101839,0,0,2.10833939483032,0.718874566474748,2.29723871668228,0,3.90909528002464,0.410952645100767,5.72995082367666,0,0,0,0,1.77866236955724,24.7265722329481,11.5993321916654,2.51274398001523,11.4828975297569,0,0,0,2.69921281782108,1.00034104211935,0.271265023699736,0.207970861530807,1.78428988797162,5.20417969611984,0.702848489956279,5.41702979509894,2.27407504055985,5.17365356462525,1.32845119707087,1.10621501125022,2.17209036170207,0.587403472388222,1.02943027143257,0,0,0,0,1.66435439510497,0.604780586659361,8.43566546583841,14.732349435654,6.17452207752762,4.10045277618243,9.21073048320066,2.41280881715411,0,1.85051632563187,3.19611105563629,2.46381468041427,0.519254429183621,1.51073491997947,0,7.61924587152482,0.736647911487171,0.114814448164607,0.728364672026868,1.31124414959424,0,0.0770153371044148,0,0,0.316654886678627,2.27466768141793,1.19065593693561,1.72732732881711,6.16909010761157,0.541892875087706,0,0,0,0,0,0,13.3354065060522,10.1684540166909,18.8719468905296,0.515205058238611,0.457847324091717,0.330037999682352,1.14853107599234,1.95018073810956,8.03419649220798,4.8335359146061,0.308097234229289,0.767518373630648,3.58375088459779,1.50388342815583,1.30515024522806,3.15338521439573,6.41030656656509,2.64455864577565,5.76570202095319,13.7821729494151,1.51736671283325,0.929691098594572,1.88887408098384,2.0911118104818,0.924100740528266,0,2.60979897622522,0.37064843820784,1.43124886741991,2.232950216158,1.89827654831236,5.90953601163857,1.79128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| |||
|short_description=p@chr14:85999686..85999701,+ | |||
}} |
Latest revision as of 23:18, 24 July 2015
Short description: | p@chr14:85999686..85999701, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:85999686..85999701, + |
Coexpression cluster: | C2318_extraskeletal_adrenal_Lymphatic_Endothelial_leiomyoblastoma_Preadipocyte_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.81e-13 | 24 |
endothelial cell | 1.76e-11 | 36 |
lining cell | 2.90e-11 | 58 |
barrier cell | 2.90e-11 | 58 |
meso-epithelial cell | 2.34e-09 | 45 |
mesodermal cell | 5.61e-09 | 121 |
blood vessel endothelial cell | 1.00e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.00e-08 | 18 |
embryonic cell | 1.18e-08 | 250 |
fibroblast | 4.10e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.50e-12 | 171 |
ectoderm | 1.50e-12 | 171 |
presumptive ectoderm | 1.50e-12 | 171 |
cell layer | 9.69e-11 | 309 |
epithelium | 1.50e-10 | 306 |
neocortex | 4.47e-10 | 20 |
embryonic structure | 1.89e-09 | 564 |
vasculature | 3.40e-09 | 78 |
vascular system | 3.40e-09 | 78 |
regional part of cerebral cortex | 4.04e-09 | 22 |
structure with developmental contribution from neural crest | 6.06e-09 | 132 |
blood vessel endothelium | 1.00e-08 | 18 |
endothelium | 1.00e-08 | 18 |
cardiovascular system endothelium | 1.00e-08 | 18 |
embryo | 1.16e-08 | 592 |
developing anatomical structure | 1.39e-08 | 581 |
germ layer | 1.53e-08 | 560 |
germ layer / neural crest | 1.53e-08 | 560 |
embryonic tissue | 1.53e-08 | 560 |
presumptive structure | 1.53e-08 | 560 |
germ layer / neural crest derived structure | 1.53e-08 | 560 |
epiblast (generic) | 1.53e-08 | 560 |
squamous epithelium | 9.02e-08 | 25 |
cerebral cortex | 1.45e-07 | 25 |
pallium | 1.45e-07 | 25 |
cardiovascular system | 3.67e-07 | 109 |
splanchnic layer of lateral plate mesoderm | 4.54e-07 | 83 |
vessel | 5.05e-07 | 68 |
simple squamous epithelium | 5.84e-07 | 22 |