FFCP PHASE1:Hg19::chr14:80221890..80221892,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:80221890..80221892,+ | |||
|description=CAGE_peak_at_chr14:80221890..80221892,+ | |||
|id=chr14:80221890..80221892,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.34e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-44;3!UBERON:0005754;4.27e-34;1!UBERON:0007297;8.34e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.10e-28!90;UBERON:0003075!1.59e-28!86;UBERON:0007284!1.59e-28!86;UBERON:0001893!1.11e-27!34;UBERON:0001049!1.26e-27!57;UBERON:0005068!1.26e-27!57;UBERON:0006241!1.26e-27!57;UBERON:0007135!1.26e-27!57;UBERON:0002791!7.04e-26!33;UBERON:0005743!4.98e-25!86;UBERON:0001017!5.92e-25!82;UBERON:0002616!2.10e-24!59;UBERON:0001869!2.19e-24!32;UBERON:0000073!1.82e-23!94;UBERON:0001016!1.82e-23!94;UBERON:0002020!1.28e-22!34;UBERON:0003528!1.28e-22!34;UBERON:0002780!4.86e-22!41;UBERON:0001890!4.86e-22!41;UBERON:0006240!4.86e-22!41;UBERON:0003080!2.19e-21!42;UBERON:0007023!2.71e-20!115;UBERON:0000955!2.07e-19!69;UBERON:0006238!2.07e-19!69;UBERON:0003056!1.63e-17!61;UBERON:0000924!1.31e-16!173;UBERON:0006601!1.31e-16!173;UBERON:0004121!3.57e-16!169;UBERON:0000956!8.26e-15!25;UBERON:0000203!8.26e-15!25;UBERON:0002619!9.91e-15!22;UBERON:0001950!6.21e-14!20;UBERON:0000033!2.72e-13!123;UBERON:0000153!3.39e-13!129;UBERON:0007811!3.39e-13!129;UBERON:0002420!4.98e-13!9;UBERON:0007245!4.98e-13!9;UBERON:0010009!4.98e-13!9;UBERON:0010011!4.98e-13!9;UBERON:0000454!4.98e-13!9;UBERON:0009663!1.37e-12!7;UBERON:0000064!1.11e-10!219;UBERON:0000200!6.70e-10!6;UBERON:0002308!1.29e-09!9;UBERON:0000125!1.29e-09!9;UBERON:0006947!7.93e-09!3;UBERON:0004054!7.93e-09!3;UBERON:0002771!7.32e-08!3;UBERON:0000025!1.17e-07!194;UBERON:0000477!1.31e-07!286;UBERON:0001871!1.98e-07!7;UBERON:0003076!2.04e-07!15;UBERON:0003057!2.04e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;4.27e-34;1!UBERON:0006868;4.27e-34;1!UBERON:0002037;6.06e-23;6!UBERON:0001875;8.34e-18;2!UBERON:0006514;8.34e-18;2!UBERON:0002680;1.13e-15;9!UBERON:0001895;1.13e-15;9!UBERON:0006947;2.45e-12;3!UBERON:0004054;2.45e-12;3!UBERON:0004733;5.08e-12;12!UBERON:0002028;5.08e-12;12!UBERON:0004732;3.56e-11;13!UBERON:0005904;1.38e-09;4!UBERON:0001016;5.57e-09;83!UBERON:0000073;3.94e-08;53!UBERON:0002616;3.94e-08;53!UBERON:0001872;6.33e-08;5!UBERON:0000955;3.65e-07;68!UBERON:0001017;4.77e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.61e-34,1;UBERON:0006868,3.61e-34,1;UBERON:0002037,5.43e-23,6;UBERON:0006215,5.43e-23,6;UBERON:0001875,9.07e-18,2;UBERON:0006514,9.07e-18,2;UBERON:0002680,1.05e-15,9;UBERON:0001895,1.05e-15,9;UBERON:0010092,1.05e-15,9;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0004733,4.80e-12,12;UBERON:0002028,4.80e-12,12;UBERON:0007277,4.80e-12,12;UBERON:0004732,3.38e-11,13;UBERON:0001017,2.13e-10,81;UBERON:0000073,2.46e-10,53;UBERON:0002616,2.46e-10,53;UBERON:0003076,7.75e-10,15;UBERON:0003057,7.75e-10,15;UBERON:0001049,8.06e-10,56;UBERON:0005068,8.06e-10,56;UBERON:0006241,8.06e-10,56;UBERON:0007135,8.06e-10,56;UBERON:0005904,1.32e-09,4;UBERON:0001016,2.02e-09,89;UBERON:0000955,4.31e-08,68;UBERON:0006238,4.31e-08,68;UBERON:0001872,7.49e-08,5;UBERON:0003075,6.74e-07,82;UBERON:0007284,6.74e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.361789315876224,0,1.43753037910592,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0.83088067605837,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0.895444205407437,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0.414775308455192,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0.636008701306837,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.131545547125698,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:80221890..80221892,+ | |||
}} |
Latest revision as of 23:10, 24 July 2015
Short description: | p@chr14:80221890..80221892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:80221890..80221892, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.61e-34 | 1 |
seminal fluid secreting gland | 3.61e-34 | 1 |
cerebellum | 5.43e-23 | 6 |
rhombic lip | 5.43e-23 | 6 |
globus pallidus | 9.07e-18 | 2 |
pallidum | 9.07e-18 | 2 |
regional part of metencephalon | 1.05e-15 | 9 |
metencephalon | 1.05e-15 | 9 |
future metencephalon | 1.05e-15 | 9 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
segmental subdivision of hindbrain | 4.80e-12 | 12 |
hindbrain | 4.80e-12 | 12 |
presumptive hindbrain | 4.80e-12 | 12 |
segmental subdivision of nervous system | 3.38e-11 | 13 |
central nervous system | 2.13e-10 | 81 |
regional part of nervous system | 2.46e-10 | 53 |
regional part of brain | 2.46e-10 | 53 |
posterior neural tube | 7.75e-10 | 15 |
chordal neural plate | 7.75e-10 | 15 |
neural tube | 8.06e-10 | 56 |
neural rod | 8.06e-10 | 56 |
future spinal cord | 8.06e-10 | 56 |
neural keel | 8.06e-10 | 56 |
duct of male reproductive system | 1.32e-09 | 4 |
nervous system | 2.02e-09 | 89 |
brain | 4.31e-08 | 68 |
future brain | 4.31e-08 | 68 |
parietal lobe | 7.49e-08 | 5 |
neural plate | 6.74e-07 | 82 |
presumptive neural plate | 6.74e-07 | 82 |