FFCP PHASE1:Hg19::chr14:75035178..75035211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75035178..75035211,- | |||
|coexpression_cluster_id=C3452 | |coexpression_cluster_id=C3452 | ||
|description=CAGE_peak_at_chr14:75035178..75035211,- | |description=CAGE_peak_at_chr14:75035178..75035211,- | ||
|id=chr14:75035178..75035211,- | |id=chr14:75035178..75035211,- | ||
|ontology_enrichment_celltype=CL:0002076!1.31e-24!43;CL:0000223!1.32e-16!59;CL:0002368!3.65e-16!13;CL:0002251!1.47e-14!21;CL:0000066!3.08e-14!254;CL:0002159!3.76e-13!13;CL:0002621!1.05e-11!3;CL:0000622!1.32e-11!5;CL:0002328!1.91e-11!3;CL:0002623!4.24e-11!3;CL:0000240!6.57e-10!6;CL:0000311!6.57e-10!6;CL:0000079!6.57e-10!6;CL:0000237!6.57e-10!6;CL:0000036!6.57e-10!6;CL:0000357!6.57e-10!6;CL:0000114!6.57e-10!6;CL:0002202!8.88e-10!9;CL:0002632!8.88e-10!9;CL:0000154!1.13e-09!6;CL:0002327!8.34e-09!4;CL:0000362!9.22e-08!8;CL:0002536!1.88e-07!2;CL:0000312!1.94e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.31e-24!43;CL:0000223!1.32e-16!59;CL:0002368!3.65e-16!13;CL:0002251!1.47e-14!21;CL:0000066!3.08e-14!254;CL:0002159!3.76e-13!13;CL:0002621!1.05e-11!3;CL:0000622!1.32e-11!5;CL:0002328!1.91e-11!3;CL:0002623!4.24e-11!3;CL:0000240!6.57e-10!6;CL:0000311!6.57e-10!6;CL:0000079!6.57e-10!6;CL:0000237!6.57e-10!6;CL:0000036!6.57e-10!6;CL:0000357!6.57e-10!6;CL:0000114!6.57e-10!6;CL:0002202!8.88e-10!9;CL:0002632!8.88e-10!9;CL:0000154!1.13e-09!6;CL:0002327!8.34e-09!4;CL:0000362!9.22e-08!8;CL:0002536!1.88e-07!2;CL:0000312!1.94e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.20e-36;14!CL:0002621;1.62e-31;3!CL:0000312;4.29e-20;5!CL:0000362;2.83e-19;9!CL:0000240;7.51e-17;6!CL:0000311;7.51e-17;6!CL:0000079;7.51e-17;6!CL:0000237;7.51e-17;6!CL:0002166;9.29e-15;3!CL:0002076;1.57e-13;42!CL:0002077;3.26e-13;34!CL:0002327;9.37e-12;4!CL:0000622;2.27e-09;5!CL:0002251;1.40e-08;20!CL:0000154;5.95e-08;6!CL:0002368;8.20e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.06e-36,14;CL:0002621,1.46e-31,3;CL:0000312,4.73e-20,5;CL:0000362,2.40e-19,9;CL:0000240,8.14e-17,6;CL:0000311,8.14e-17,6;CL:0000079,8.14e-17,6;CL:0000237,8.14e-17,6;CL:0000036,8.14e-17,6;CL:0000357,8.14e-17,6;CL:0000114,8.14e-17,6;CL:0002076,4.88e-15,42;CL:0002166,1.15e-14,3;CL:0002077,1.70e-14,34;CL:0000066,1.46e-12,253;CL:0002327,8.20e-12,4;CL:0000223,1.22e-10,58;CL:0000622,2.00e-09,5;CL:0002251,1.43e-08,20;CL:0000154,5.36e-08,6;CL:0002368,7.64e-08,13;CL:0002321,3.95e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;7.51e-17;6!CL:0000114;7.51e-17;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!8.83e-15!21;UBERON:0001044!1.98e-14!6;UBERON:0003293!1.98e-14!6;UBERON:0003294!1.98e-14!6;UBERON:0010047!1.98e-14!6;UBERON:0000167!1.98e-14!6;UBERON:0000165!1.05e-12!28;UBERON:0000930!1.05e-12!28;UBERON:0001004!1.11e-12!72;UBERON:0000161!9.24e-12!35;UBERON:0001949!1.05e-11!3;UBERON:0004815!1.91e-11!3;UBERON:0002031!1.91e-11!3;UBERON:0004119!1.12e-09!169;UBERON:0000925!1.12e-09!169;UBERON:0006595!1.12e-09!169;UBERON:0002365!1.97e-09!31;UBERON:0002330!1.97e-09!31;UBERON:0001911!8.34e-09!4;UBERON:0005333!8.34e-09!4;UBERON:0008425!8.34e-09!4;UBERON:0005311!8.34e-09!4;UBERON:0002185!1.11e-08!4;UBERON:0003408!1.61e-08!10;UBERON:0007196!2.13e-08!14;UBERON:0001558!2.13e-08!14;UBERON:0001444!8.00e-08!48;UBERON:0003102!1.24e-07!95 | |ontology_enrichment_uberon=UBERON:0000166!8.83e-15!21;UBERON:0001044!1.98e-14!6;UBERON:0003293!1.98e-14!6;UBERON:0003294!1.98e-14!6;UBERON:0010047!1.98e-14!6;UBERON:0000167!1.98e-14!6;UBERON:0000165!1.05e-12!28;UBERON:0000930!1.05e-12!28;UBERON:0001004!1.11e-12!72;UBERON:0000161!9.24e-12!35;UBERON:0001949!1.05e-11!3;UBERON:0004815!1.91e-11!3;UBERON:0002031!1.91e-11!3;UBERON:0004119!1.12e-09!169;UBERON:0000925!1.12e-09!169;UBERON:0006595!1.12e-09!169;UBERON:0002365!1.97e-09!31;UBERON:0002330!1.97e-09!31;UBERON:0001911!8.34e-09!4;UBERON:0005333!8.34e-09!4;UBERON:0008425!8.34e-09!4;UBERON:0005311!8.34e-09!4;UBERON:0002185!1.11e-08!4;UBERON:0003408!1.61e-08!10;UBERON:0007196!2.13e-08!14;UBERON:0001558!2.13e-08!14;UBERON:0001444!8.00e-08!48;UBERON:0003102!1.24e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.62e-31;3!UBERON:0010371;1.07e-15;31!UBERON:0000486;4.88e-14;12!UBERON:0003929;6.78e-14;7!UBERON:0003350;3.12e-12;8!UBERON:0001828;3.12e-12;8!UBERON:0001911;9.37e-12;4!UBERON:0001003;1.15e-11;15!UBERON:0007376;1.15e-11;15!UBERON:0001708;2.63e-11;4!UBERON:0008895;2.63e-11;4!UBERON:0011159;3.17e-09;5!UBERON:0000161;5.06e-09;19!UBERON:0000166;5.06e-09;19!UBERON:0004807;8.14e-08;22!UBERON:0003729;9.89e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.46e-31,3;UBERON:0003102,1.74e-13,99;UBERON:0003350,3.00e-12,8;UBERON:0001828,3.00e-12,8;UBERON:0001911,8.20e-12,4;UBERON:0005333,8.20e-12,4;UBERON:0008425,8.20e-12,4;UBERON:0005311,8.20e-12,4;UBERON:0001003,1.04e-11,15;UBERON:0007376,1.04e-11,15;UBERON:0007383,1.04e-11,15;UBERON:0001708,3.07e-11,4;UBERON:0008895,3.07e-11,4;UBERON:0011159,3.59e-09,5;UBERON:0010371,1.12e-08,104;UBERON:0000033,2.19e-08,56;UBERON:0000166,8.30e-08,22;UBERON:0010188,8.71e-08,6;UBERON:0002539,8.71e-08,6;UBERON:0008816,8.71e-08,6;UBERON:0003729,9.66e-08,13;UBERON:0000153,1.65e-07,62;UBERON:0007811,1.65e-07,62;UBERON:0000161,3.53e-07,36 | |||
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| ||
|short_description=p@chr14:75035178..75035211,- | |short_description=p@chr14:75035178..75035211,- | ||
}} | }} |
Latest revision as of 22:42, 24 July 2015
Short description: | p@chr14:75035178..75035211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75035178..75035211, - |
Coexpression cluster: | C3452_Mammary_Keratinocyte_salivary_Bronchial_Small_Prostate_Placental |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 5.06e-36 | 14 |
gingival epithelial cell | 1.46e-31 | 3 |
keratinocyte | 4.73e-20 | 5 |
epidermal cell | 2.40e-19 | 9 |
stratified squamous epithelial cell | 8.14e-17 | 6 |
keratin accumulating cell | 8.14e-17 | 6 |
stratified epithelial cell | 8.14e-17 | 6 |
keratinizing barrier epithelial cell | 8.14e-17 | 6 |
epithelial fate stem cell | 8.14e-17 | 6 |
stratified epithelial stem cell | 8.14e-17 | 6 |
surface ectodermal cell | 8.14e-17 | 6 |
endo-epithelial cell | 4.88e-15 | 42 |
epithelial cell of Malassez | 1.15e-14 | 3 |
ecto-epithelial cell | 1.70e-14 | 34 |
epithelial cell | 1.46e-12 | 253 |
mammary gland epithelial cell | 8.20e-12 | 4 |
endodermal cell | 1.22e-10 | 58 |
acinar cell | 2.00e-09 | 5 |
epithelial cell of alimentary canal | 1.43e-08 | 20 |
protein secreting cell | 5.36e-08 | 6 |
respiratory epithelial cell | 7.64e-08 | 13 |
embryonic cell | 3.95e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.46e-31 | 3 |
surface structure | 1.74e-13 | 99 |
epithelium of mucosa | 3.00e-12 | 8 |
gingiva | 3.00e-12 | 8 |
mammary gland | 8.20e-12 | 4 |
mammary bud | 8.20e-12 | 4 |
mammary ridge | 8.20e-12 | 4 |
mammary placode | 8.20e-12 | 4 |
skin epidermis | 1.04e-11 | 15 |
outer epithelium | 1.04e-11 | 15 |
enveloping layer of ectoderm | 1.04e-11 | 15 |
jaw skeleton | 3.07e-11 | 4 |
splanchnocranium | 3.07e-11 | 4 |
primary subdivision of cranial skeletal system | 3.59e-09 | 5 |
ecto-epithelium | 1.12e-08 | 104 |
head | 2.19e-08 | 56 |
oral opening | 8.30e-08 | 22 |
protuberance | 8.71e-08 | 6 |
pharyngeal arch | 8.71e-08 | 6 |
embryonic head | 8.71e-08 | 6 |
mouth mucosa | 9.66e-08 | 13 |
anterior region of body | 1.65e-07 | 62 |
craniocervical region | 1.65e-07 | 62 |
orifice | 3.53e-07 | 36 |