FFCP PHASE1:Hg19::chr14:23595889..23595905,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23595889..23595905,-
|short_description=p@chr14:23595889..23595905,-
|description=CAGE_peak_at_chr14:23595889..23595905,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:23595889..23595905,- | |||
|description=CAGE_peak_at_chr14:23595889..23595905,- | |||
|id=chr14:23595889..23595905,- | |||
|ontology_enrichment_celltype=CL:0000147!1.24e-09!14;CL:0000325!4.96e-08!39;CL:0000148!5.74e-07!10;CL:0000541!5.74e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.68e-18;14!CL:0002586;2.92e-13;3!CL:0000148;8.69e-11;10!CL:0000149;4.67e-10;4!CL:0000575;3.74e-09;2!CL:0002567;6.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.33e-18,14;CL:0002586,2.24e-13,3;CL:0000148,8.05e-11,10;CL:0000541,8.05e-11,10;CL:0000149,3.84e-10,4;CL:0000575,4.15e-09,2;CL:0002567,6.22e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-10!115;UBERON:0003102!1.06e-08!95;UBERON:0000924!7.20e-08!173;UBERON:0006601!7.20e-08!173;UBERON:0000468!3.26e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.90e-13;5!UBERON:0005388;1.90e-13;5!UBERON:0001802;1.90e-13;5!UBERON:0001781;2.92e-13;3!UBERON:0001782;2.92e-13;3!UBERON:0000019;9.90e-10;19!UBERON:0000047;9.90e-10;19!UBERON:0004088;9.90e-10;19!UBERON:0010230;9.90e-10;19!UBERON:0000970;3.40e-09;20!UBERON:0002104;1.04e-08;21!UBERON:0001456;1.04e-08;21!UBERON:0000020;7.23e-08;23!UBERON:0001032;1.69e-07;24!UBERON:0004456;1.69e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.24e-13,3;UBERON:0005424,2.24e-13,3;UBERON:0000966,2.51e-11,6;UBERON:0005388,2.51e-11,6;UBERON:0001802,2.51e-11,6;UBERON:0001781,3.84e-10,4;UBERON:0000019,2.93e-09,20;UBERON:0000047,2.93e-09,20;UBERON:0010312,2.93e-09,20;UBERON:0004088,2.93e-09,20;UBERON:0010230,2.93e-09,20;UBERON:0003072,2.93e-09,20;UBERON:0004128,2.93e-09,20;UBERON:0003071,2.93e-09,20;UBERON:0000970,9.03e-09,21;UBERON:0002104,9.03e-09,21;UBERON:0001456,2.51e-08,22;UBERON:0000020,1.50e-07,24;UBERON:0001032,1.50e-07,24;UBERON:0004456,1.50e-07,24;UBERON:0005085,3.21e-07,31 | |||
|phase1_expression=0.908391896352783,2.35510576280081,0.845726424575827,0,0.446961094427288,0,0,0,1.56711376919903,0,0.697801167972428,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.895661896959697,0.971680998056939,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,2.02785126545153,0,0.486634870302636,0.283604451492204,0,0.614843499851882,0.785874452986276,1.09288586487763,2.96627554227544,0.649094787309367,0.870648686496336,2.6591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0.747243402759005,0.117434498643765,0,0,0,0,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0,0.412210116953756,0.515281080091258,0.18611685633159,0,0.779496041289589,0.252433774244115,0.0920498986422993,0.969876340912871,0,0.503760491138201,0,0.193260853163297,0,0,1.21973706129595,0.397589304964456,0.580969714347592,0.518305275076852,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.878002283269004,0,0.301586917234893,0.833296006426766,0.325808305310325,0,2.88662684050547,0.231860809950154,0,0,0,0,0.790204397959275,0,0.492434012174795,0,0.743155811443641,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0.383382679165211,0.985326475791887,0.088048434013226,0,0,0,3.23839260890062,6.49380323449072,0,3.4214489204541,2.57068731758309,0.901029173531752,2.5724378936752,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,4.34097284313154,0,0,0,0,0.301439377059586,0,1.09970290300263,0,1.00451418286425,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0.604780586659361,0.248107807818777,0.306923946576125,1.12264037773229,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0.604297247958111,1.40354529212299,0.920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,2.05160100093111,1.96808787419823,3.25378394664303,0.618246069886334,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0.330569830721956,0.384380134730212,0,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0.670302275535787,0,0.376575203107117,0.43050537267123,1.68471475667626,2.21715076768338,0.918893600827838,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.879049075631364,0,0,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,0,0,1.13697999995054,0,1.70690172428249,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0.21787692703798,2.09135616417905,0.384751292518985,0,0.46112780877612,1.70539524378567,0.108647371922008,0.638002319463839,0,1.06606955203727,0,0.31396051279005,0,0,0.392125068635479,0,0,0.158936578980379,0,0.163232808159148,0.424059214301822,2.16388639742091,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,1.57833761139756,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,1.12527203925513,1.65047323916681,3.73896304226267,0,0,0.0607495566580247,2.34804281319486,0.945668487590378,1.04909176269996,0,0,0,0,0.662091970365432,0,2.17199840701485,0,2.28611152076586,0,0.082092520749339,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.3755727921195,0,0.332787154610557,0,0.276697269872462,0,1.06154382279153,0.285465333544967,0,0,0,0,0,0,0.947015026375446,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0.337884881306145,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0.552317850755522,0,0,0,0,0.314531883711793,0,0.509197589862076,0.850299680406731,2.97445834221605,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0.161475645631851,0,0.88332946650923,0,1.28400018965175,0,0,0,0.397832444232549,0.526472298444801,0.20170506870352,0.781514011233092,0.261906694481422,0.163771917510097,0,0.135075169236789,0,0,0.253663240775627,0,0,0,0.351742488719241,0,0,0.336283722218824,1.82089681270989,0.227662191351298,0.532214220975833,0,0,0.271878931907327,0.328863867814245,0,0,0.549451649953598,0,0.560544326627578,0,0,0,1.42953088353313,0,0,0,0,0.62164849248911,0.17071847709395,1.38251932362818,0,0.709992004383392,0.511280428554946,2.9637093513365,0,0,0,0.335566295393377,0,0,0.647428837187895,0.205325613712494,0,0,0,0.397901550322736,0,0,0,0.452888530700021,0.231522474323834,0.437119121007915,0,0,0,0.392616934229891,0,0,0,0.281951753939561,0.45120521581504,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0.543931921527318,0,0.5290268405154,1.85997509083376,3.23522940041993,0.432626562123789,0.126166424835079,0.218531143927391,0.506794004045748,0.61193297845189,0.26721740526556,0.36757959813938,0.752122617877125,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0.509177266225319,0,0.653150243690884,0.684466602170562,0.202056159043763,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0.908391896352783,2.35510576280081,0.845726424575827,0,0.446961094427288,0,0,0,1.56711376919903,0,0.697801167972428,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.895661896959697,0.971680998056939,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,2.02785126545153,0,0.486634870302636,0.283604451492204,0,0.614843499851882,0.785874452986276,1.09288586487763,2.96627554227544,0.649094787309367,0.870648686496336,2.6591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0.747243402759005,0.117434498643765,0,0,0,0,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0,0.412210116953756,0.515281080091258,0.18611685633159,0,0.779496041289589,0.252433774244115,0.0920498986422993,0.969876340912871,0,0.503760491138201,0,0.193260853163297,0,0,1.21973706129595,0.397589304964456,0.580969714347592,0.518305275076852,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.878002283269004,0,0.301586917234893,0.833296006426766,0.325808305310325,0,2.88662684050547,0.231860809950154,0,0,0,0,0.790204397959275,0,0.492434012174795,0,0.743155811443641,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0.383382679165211,0.985326475791887,0.088048434013226,0,0,0,3.23839260890062,6.49380323449072,0,3.4214489204541,2.57068731758309,0.901029173531752,2.5724378936752,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,4.34097284313154,0,0,0,0,0.301439377059586,0,1.09970290300263,0,1.00451418286425,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0.604780586659361,0.248107807818777,0.306923946576125,1.12264037773229,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0.604297247958111,1.40354529212299,0.920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,2.05160100093111,1.96808787419823,3.25378394664303,0.618246069886334,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0.330569830721956,0.384380134730212,0,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0.670302275535787,0,0.376575203107117,0.43050537267123,1.68471475667626,2.21715076768338,0.918893600827838,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.879049075631364,0,0,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,0,0,1.13697999995054,0,1.70690172428249,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0.21787692703798,2.09135616417905,0.384751292518985,0,0.46112780877612,1.70539524378567,0.108647371922008,0.638002319463839,0,1.06606955203727,0,0.31396051279005,0,0,0.392125068635479,0,0,0.158936578980379,0,0.163232808159148,0.424059214301822,2.16388639742091,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,1.57833761139756,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,1.12527203925513,1.65047323916681,3.73896304226267,0,0,0.0607495566580247,2.34804281319486,0.945668487590378,1.04909176269996,0,0,0,0,0.662091970365432,0,2.17199840701485,0,2.28611152076586,0,0.082092520749339,0,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.3755727921195,0,0.332787154610557,0,0.276697269872462,0,1.06154382279153,0.285465333544967,0,0,0,0,0,0,0.947015026375446,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0.337884881306145,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0.552317850755522,0,0,0,0,0.314531883711793,0,0.509197589862076,0.850299680406731,2.97445834221605,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0.161475645631851,0,0.88332946650923,0,1.28400018965175,0,0,0,0.397832444232549,0.526472298444801,0.20170506870352,0.781514011233092,0.261906694481422,0.163771917510097,0,0.135075169236789,0,0,0.253663240775627,0,0,0,0.351742488719241,0,0,0.336283722218824,1.82089681270989,0.227662191351298,0.532214220975833,0,0,0.271878931907327,0.328863867814245,0,0,0.549451649953598,0,0.560544326627578,0,0,0,1.42953088353313,0,0,0,0,0.62164849248911,0.17071847709395,1.38251932362818,0,0.709992004383392,0.511280428554946,2.9637093513365,0,0,0,0.335566295393377,0,0,0.647428837187895,0.205325613712494,0,0,0,0.397901550322736,0,0,0,0.452888530700021,0.231522474323834,0.437119121007915,0,0,0,0.392616934229891,0,0,0,0.281951753939561,0.45120521581504,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0.543931921527318,0,0.5290268405154,1.85997509083376,3.23522940041993,0.432626562123789,0.126166424835079,0.218531143927391,0.506794004045748,0.61193297845189,0.26721740526556,0.36757959813938,0.752122617877125,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0.509177266225319,0,0.653150243690884,0.684466602170562,0.202056159043763,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr14:23595889..23595905,- | |||
}} | }} |
Latest revision as of 19:26, 24 July 2015
Short description: | p@chr14:23595889..23595905, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23595889..23595905, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.33e-18 | 14 |
retinal pigment epithelial cell | 2.24e-13 | 3 |
melanocyte | 8.05e-11 | 10 |
melanoblast | 8.05e-11 | 10 |
visual pigment cell | 3.84e-10 | 4 |
corneal epithelial cell | 4.15e-09 | 2 |
light melanocyte | 6.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.24e-13 | 3 |
presumptive retinal pigmented epithelium | 2.24e-13 | 3 |
retina | 2.51e-11 | 6 |
photoreceptor array | 2.51e-11 | 6 |
posterior segment of eyeball | 2.51e-11 | 6 |
layer of retina | 3.84e-10 | 4 |
camera-type eye | 2.93e-09 | 20 |
simple eye | 2.93e-09 | 20 |
immature eye | 2.93e-09 | 20 |
ocular region | 2.93e-09 | 20 |
eyeball of camera-type eye | 2.93e-09 | 20 |
optic cup | 2.93e-09 | 20 |
optic vesicle | 2.93e-09 | 20 |
eye primordium | 2.93e-09 | 20 |
eye | 9.03e-09 | 21 |
visual system | 9.03e-09 | 21 |
face | 2.51e-08 | 22 |
sense organ | 1.50e-07 | 24 |
sensory system | 1.50e-07 | 24 |
entire sense organ system | 1.50e-07 | 24 |
ectodermal placode | 3.21e-07 | 31 |