FFCP PHASE1:Hg19::chr14:106237042..106237061,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106237042..106237061,- | |||
|coexpression_cluster_id=C481 | |coexpression_cluster_id=C481 | ||
|description=CAGE_peak_at_chr14:106237042..106237061,- | |description=CAGE_peak_at_chr14:106237042..106237061,- | ||
|id=chr14:106237042..106237061,- | |id=chr14:106237042..106237061,- | ||
|ontology_enrichment_celltype=CL:0000945!7.98e-17!24;CL:0000826!7.98e-17!24;CL:0000236!1.96e-16!14;CL:0000542!2.70e-09!53;CL:0000051!2.70e-09!53;CL:0000838!5.65e-08!52 | |ontology_enrichment_celltype=CL:0000945!7.98e-17!24;CL:0000826!7.98e-17!24;CL:0000236!1.96e-16!14;CL:0000542!2.70e-09!53;CL:0000051!2.70e-09!53;CL:0000838!5.65e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.47e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.00e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0004872;7.14e-16;7!UBERON:0005754;1.61e-13;1!UBERON:0007297;2.15e-07;2!UBERON:0006965;2.91e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;7.24e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,6.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.77e-22!115 | |ontology_enrichment_uberon=UBERON:0007023!2.77e-22!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.55e-17;3!UBERON:0000998;1.61e-13;1!UBERON:0006868;1.61e-13;1!UBERON:0000029;1.82e-13;1!UBERON:0002372;2.18e-13;1!UBERON:0001961;2.18e-13;1!UBERON:0001744;2.18e-13;1!UBERON:0001042;2.18e-13;1!UBERON:0001735;2.18e-13;1!UBERON:0002171;7.24e-13;1!UBERON:0006518;7.24e-13;1!UBERON:0008949;7.24e-13;1!UBERON:0000101;7.24e-13;1!UBERON:0002167;7.24e-13;1!UBERON:0004177;1.86e-10;5!UBERON:0005057;1.86e-10;5!UBERON:0000341;2.50e-07;2!UBERON:0006562;2.50e-07;2!UBERON:0002405;2.55e-07;27!UBERON:0001255;3.28e-07;2!UBERON:0001556;3.28e-07;2!UBERON:0003127;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.90e-17,3;UBERON:0004854,7.90e-17,3;UBERON:0009034,7.90e-17,3;UBERON:0002095,7.90e-17,3;UBERON:0004782,7.90e-17,3;UBERON:0003281,7.90e-17,3;UBERON:0009664,7.90e-17,3;UBERON:0002296,7.90e-17,3;UBERON:0005602,7.90e-17,3;UBERON:0001179,7.90e-17,3;UBERON:0006293,7.90e-17,3;UBERON:0000998,1.61e-13,1;UBERON:0006868,1.61e-13,1;UBERON:0000029,1.82e-13,1;UBERON:0002372,2.32e-13,1;UBERON:0001961,2.32e-13,1;UBERON:0001744,2.32e-13,1;UBERON:0001735,2.32e-13,1;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0003887,1.42e-09,12;UBERON:0007023,4.30e-09,114;UBERON:0004177,9.88e-08,7;UBERON:0005057,9.88e-08,7;UBERON:0000341,2.43e-07,2;UBERON:0001255,3.48e-07,2;UBERON:0001556,3.48e-07,2;UBERON:0003127,3.70e-07,2;UBERON:0000945,7.22e-07,8;UBERON:0010039,7.22e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,2.07151151837561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.60181118851542,0,1.24271716604159,12.4041505452988,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,2.6315497034359,0,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,6.39701945702943,0,0.516711278688049,0,0,0.12729431655633,0,0.435433495793923,0,6.19638887734205,1.93649954560226,0,0,0,0,0,0,0.244482888365733,0,0,3.62292828463847,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,2.07151151837561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.60181118851542,0,1.24271716604159,12.4041505452988,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,2.6315497034359,0,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,6.39701945702943,0,0.516711278688049,0,0,0.12729431655633,0,0.435433495793923,0,6.19638887734205,1.93649954560226,0,0,0,0,0,0,0.244482888365733,0,0,3.62292828463847,0 | ||
|short_description=p@chr14:106237042..106237061,- | |short_description=p@chr14:106237042..106237061,- | ||
}} | }} |
Latest revision as of 18:39, 24 July 2015
Short description: | p@chr14:106237042..106237061, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106237042..106237061, - |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.90e-17 | 3 |
gastrointestinal system mesentery | 7.90e-17 | 3 |
stomach region | 7.90e-17 | 3 |
mesentery | 7.90e-17 | 3 |
gastrointestinal system serosa | 7.90e-17 | 3 |
mesentery of stomach | 7.90e-17 | 3 |
gut mesentery | 7.90e-17 | 3 |
dorsal mesentery | 7.90e-17 | 3 |
dorsal mesogastrium | 7.90e-17 | 3 |
peritoneal cavity | 7.90e-17 | 3 |
spleen primordium | 7.90e-17 | 3 |
seminal vesicle | 1.61e-13 | 1 |
seminal fluid secreting gland | 1.61e-13 | 1 |
lymph node | 1.82e-13 | 1 |
tonsil | 2.32e-13 | 1 |
mucosa-associated lymphoid tissue | 2.32e-13 | 1 |
lymphoid tissue | 2.32e-13 | 1 |
tonsillar ring | 2.32e-13 | 1 |
lower lobe of right lung | 8.64e-13 | 1 |
right lung lobe | 8.64e-13 | 1 |
lower lobe of lung | 8.64e-13 | 1 |
lobe of lung | 8.64e-13 | 1 |
right lung | 8.64e-13 | 1 |
intraembryonic coelom | 1.42e-09 | 12 |
adult organism | 4.30e-09 | 114 |
hemopoietic organ | 9.88e-08 | 7 |
immune organ | 9.88e-08 | 7 |
throat | 2.43e-07 | 2 |
urinary bladder | 3.48e-07 | 2 |
lower urinary tract | 3.48e-07 | 2 |
open tracheal system trachea | 3.70e-07 | 2 |
stomach | 7.22e-07 | 8 |
food storage organ | 7.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 6.06e-13 | 1 |