FFCP PHASE1:Hg19::chr14:106174942..106174961,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:106174942..106174961,+ | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_at_chr14:106174942..106174961,+ | |||
|id=chr14:106174942..106174961,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.78e-19!14;CL:0000945!8.18e-11!24;CL:0000826!8.18e-11!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;8.56e-19;13!CL:0000945;3.78e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.89e-17,14;CL:0000945,3.78e-10,24;CL:0000826,3.78e-10,24 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.24e-11;1!UBERON:0008801;1.24e-11;1!UBERON:0001045;1.97e-11;1!UBERON:0009143;4.01e-11;1!UBERON:0006595;6.09e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-32!115;UBERON:0001829!1.40e-10!2;UBERON:0001044!9.89e-08!6;UBERON:0003293!9.89e-08!6;UBERON:0003294!9.89e-08!6;UBERON:0010047!9.89e-08!6;UBERON:0000167!9.89e-08!6;UBERON:0003408!1.64e-07!10;UBERON:0004921!3.45e-07!129;UBERON:0004185!3.45e-07!129;UBERON:0001007!6.01e-07!155;UBERON:0001555!6.01e-07!155;UBERON:0007026!6.01e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.69e-21;2!UBERON:0004921;4.98e-16;33!UBERON:0001044;5.39e-16;6!UBERON:0003293;5.39e-16;6!UBERON:0003294;5.39e-16;6!UBERON:0010047;5.39e-16;6!UBERON:0003408;5.39e-16;6!UBERON:0000167;5.39e-16;6!UBERON:0001041;7.97e-12;14!UBERON:0002372;9.56e-12;1!UBERON:0001961;9.56e-12;1!UBERON:0001744;9.56e-12;1!UBERON:0001042;9.56e-12;1!UBERON:0001735;9.56e-12;1!UBERON:0001831;1.24e-11;1!UBERON:0001736;1.24e-11;1!UBERON:0001567;1.24e-11;1!UBERON:0001154;1.97e-11;1!UBERON:0001153;1.97e-11;1!UBERON:0009854;1.97e-11;1!UBERON:0002171;4.01e-11;1!UBERON:0006518;4.01e-11;1!UBERON:0008949;4.01e-11;1!UBERON:0000101;4.01e-11;1!UBERON:0002167;4.01e-11;1!UBERON:0000161;6.95e-09;19!UBERON:0000166;6.95e-09;19!UBERON:0001555;2.62e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.08e-21,2;UBERON:0007023,1.63e-17,114;UBERON:0001044,5.53e-16,6;UBERON:0003293,5.53e-16,6;UBERON:0003294,5.53e-16,6;UBERON:0010047,5.53e-16,6;UBERON:0000167,5.53e-16,6;UBERON:0002372,9.57e-12,1;UBERON:0001961,9.57e-12,1;UBERON:0001744,9.57e-12,1;UBERON:0001735,9.57e-12,1;UBERON:0001831,1.31e-11,1;UBERON:0001567,1.31e-11,1;UBERON:0008801,1.31e-11,1;UBERON:0001736,1.45e-11,1;UBERON:0006298,1.45e-11,1;UBERON:0001154,1.78e-11,1;UBERON:0001153,1.78e-11,1;UBERON:0001045,1.78e-11,1;UBERON:0002171,3.28e-11,1;UBERON:0006518,3.28e-11,1;UBERON:0008949,3.28e-11,1;UBERON:0000101,3.28e-11,1;UBERON:0002167,3.28e-11,1;UBERON:0004921,2.34e-10,118;UBERON:0003408,8.24e-10,10;UBERON:0001041,3.88e-08,87;UBERON:0001007,4.28e-08,145;UBERON:0001555,4.28e-08,145;UBERON:0007026,4.28e-08,145;UBERON:0000166,1.09e-07,22;UBERON:0004119,3.65e-07,160;UBERON:0000925,3.65e-07,160;UBERON:0006595,3.65e-07,160 | |||
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|short_description=p@chr14:106174942..106174961,+ | |||
}} |
Latest revision as of 18:39, 24 July 2015
Short description: | p@chr14:106174942..106174961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106174942..106174961, + |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.89e-17 | 14 |
lymphocyte of B lineage | 3.78e-10 | 24 |
pro-B cell | 3.78e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.08e-21 | 2 |
adult organism | 1.63e-17 | 114 |
saliva-secreting gland | 5.53e-16 | 6 |
gland of oral region | 5.53e-16 | 6 |
gland of foregut | 5.53e-16 | 6 |
oral gland | 5.53e-16 | 6 |
oral cavity | 5.53e-16 | 6 |
tonsil | 9.57e-12 | 1 |
mucosa-associated lymphoid tissue | 9.57e-12 | 1 |
lymphoid tissue | 9.57e-12 | 1 |
tonsillar ring | 9.57e-12 | 1 |
parotid gland | 1.31e-11 | 1 |
cheek | 1.31e-11 | 1 |
parotid gland primordium | 1.31e-11 | 1 |
submandibular gland | 1.45e-11 | 1 |
submandibular gland primordium | 1.45e-11 | 1 |
vermiform appendix | 1.78e-11 | 1 |
caecum | 1.78e-11 | 1 |
midgut | 1.78e-11 | 1 |
lower lobe of right lung | 3.28e-11 | 1 |
right lung lobe | 3.28e-11 | 1 |
lower lobe of lung | 3.28e-11 | 1 |
lobe of lung | 3.28e-11 | 1 |
right lung | 3.28e-11 | 1 |
subdivision of digestive tract | 2.34e-10 | 118 |
gland of gut | 8.24e-10 | 10 |
foregut | 3.88e-08 | 87 |
digestive system | 4.28e-08 | 145 |
digestive tract | 4.28e-08 | 145 |
primitive gut | 4.28e-08 | 145 |
oral opening | 1.09e-07 | 22 |
endoderm-derived structure | 3.65e-07 | 160 |
endoderm | 3.65e-07 | 160 |
presumptive endoderm | 3.65e-07 | 160 |