FFCP PHASE1:Hg19::chr13:95900223..95900250,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:95900223..95900250,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr13:95900223..95900250,- | |||
|id=chr13:95900223..95900250,- | |||
|ontology_enrichment_celltype=CL:0002274!3.85e-14!5;CL:0000457!3.85e-14!5;CL:0002191!3.85e-14!5;CL:0000097!3.85e-14!5;CL:0000831!3.85e-14!5;CL:0002028!3.85e-14!5;CL:0000037!5.45e-13!172;CL:0000566!5.45e-13!172;CL:0000763!4.54e-12!112;CL:0000049!4.54e-12!112;CL:0000988!9.61e-12!182;CL:0002032!2.78e-10!165;CL:0000837!2.78e-10!165;CL:0000775!3.18e-09!3;CL:0000094!9.47e-09!8;CL:0000842!1.01e-08!3;CL:0000163!1.19e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.01e-17;5!CL:0000775;1.65e-16;3!CL:0000094;1.83e-16;8!CL:0000081;6.45e-12;11!CL:0000764;2.90e-11;2!CL:0000558;2.90e-11;2!CL:0000163;9.78e-10;9!CL:0000767;4.40e-08;3!CL:0000226;8.57e-08;3!CL:0000842;8.57e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.89e-17,5;CL:0002028,1.89e-17,5;CL:0000775,1.45e-16,3;CL:0000094,1.68e-16,8;CL:0000081,6.09e-12,11;CL:0000764,3.23e-11,2;CL:0000765,3.23e-11,2;CL:0000050,3.23e-11,2;CL:0000038,3.23e-11,2;CL:0000558,3.23e-11,2;CL:0000547,3.23e-11,2;CL:0000549,3.23e-11,2;CL:0000550,3.23e-11,2;CL:0000552,3.23e-11,2;CL:0000763,2.11e-10,108;CL:0000049,2.11e-10,108;CL:0000037,2.83e-10,168;CL:0000163,9.46e-10,9;CL:0000988,1.61e-09,177;CL:0002032,1.17e-08,161;CL:0000837,1.17e-08,161;CL:0000767,4.40e-08,3;CL:0000226,7.46e-08,3;CL:0000842,7.46e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.16e-11!8;DOID:8692!7.57e-10!31;DOID:1240!1.49e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8552;8.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,8.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.37e-25!15;UBERON:0000179!1.37e-25!15;UBERON:0000463!1.37e-25!15;UBERON:0007023!2.46e-10!115;UBERON:0002390!3.80e-08!102;UBERON:0003061!3.80e-08!102;UBERON:0002193!1.14e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-42;15!UBERON:0000179;1.85e-42;15!UBERON:0000463;1.85e-42;15!UBERON:0002390;1.46e-24;32!UBERON:0002193;3.56e-13;42!UBERON:0002106;1.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.55e-42,15;UBERON:0000179,1.55e-42,15;UBERON:0000463,1.55e-42,15;UBERON:0002390,4.45e-12,98;UBERON:0003061,4.45e-12,98;UBERON:0002193,1.24e-10,108;UBERON:0002106,1.09e-07,3;UBERON:0004854,1.09e-07,3;UBERON:0009034,1.09e-07,3;UBERON:0002095,1.09e-07,3;UBERON:0004782,1.09e-07,3;UBERON:0003281,1.09e-07,3;UBERON:0009664,1.09e-07,3;UBERON:0002296,1.09e-07,3;UBERON:0005602,1.09e-07,3;UBERON:0001179,1.09e-07,3;UBERON:0006293,1.09e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,3.14691421479123,3.45446458287491,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,1.09227722252426,0,0,0,2.29900975981793,0.661044872784862,0,0,0,0,1.32171328579026,2.24203425192614,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.22230321697,62.2502428473508,0.829312462163088,1.8735593944205,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,2.24702107184155,2.99161459204025,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,2.5885704098234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,2.0914836081992,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,72.5650081202002,62.7002509856748,35.8877727919722,28.8260448303925,26.3271854775164,50.580918273032,49.1428607886684,26.1731308177109,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.415973673131,3.3307196799782,15.5085705596634,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.3172947755104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941881538370149,13.6293579158128,0.225595660617181,0,0.167821586975843,0.75901493089674,7.15214605411704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,1.78537165953498,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25392132795769,0,0,0,0,0,0,0,0,0.320362237703084,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2217909337381,1.86927875123374,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr13:95900223..95900250,- | |||
}} |
Latest revision as of 17:31, 24 July 2015
Short description: | p@chr13:95900223..95900250, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:95900223..95900250, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.89e-17 | 5 |
basophil mast progenitor cell | 1.89e-17 | 5 |
neutrophil | 1.45e-16 | 3 |
granulocyte | 1.68e-16 | 8 |
blood cell | 6.09e-12 | 11 |
erythroid lineage cell | 3.23e-11 | 2 |
erythroblast | 3.23e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 3.23e-11 | 2 |
erythroid progenitor cell | 3.23e-11 | 2 |
reticulocyte | 3.23e-11 | 2 |
proerythroblast | 3.23e-11 | 2 |
basophilic erythroblast | 3.23e-11 | 2 |
polychromatophilic erythroblast | 3.23e-11 | 2 |
orthochromatic erythroblast | 3.23e-11 | 2 |
myeloid cell | 2.11e-10 | 108 |
common myeloid progenitor | 2.11e-10 | 108 |
hematopoietic stem cell | 2.83e-10 | 168 |
endocrine cell | 9.46e-10 | 9 |
hematopoietic cell | 1.61e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.17e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-08 | 161 |
basophil | 4.40e-08 | 3 |
single nucleate cell | 7.46e-08 | 3 |
mononuclear cell | 7.46e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.55e-42 | 15 |
haemolymphatic fluid | 1.55e-42 | 15 |
organism substance | 1.55e-42 | 15 |
hematopoietic system | 4.45e-12 | 98 |
blood island | 4.45e-12 | 98 |
hemolymphoid system | 1.24e-10 | 108 |
spleen | 1.09e-07 | 3 |
gastrointestinal system mesentery | 1.09e-07 | 3 |
stomach region | 1.09e-07 | 3 |
mesentery | 1.09e-07 | 3 |
gastrointestinal system serosa | 1.09e-07 | 3 |
mesentery of stomach | 1.09e-07 | 3 |
gut mesentery | 1.09e-07 | 3 |
dorsal mesentery | 1.09e-07 | 3 |
dorsal mesogastrium | 1.09e-07 | 3 |
peritoneal cavity | 1.09e-07 | 3 |
spleen primordium | 1.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 8.49e-07 | 1 |