FFCP PHASE1:Hg19::chr13:94958004..94958025,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:94958004..94958025,+
|short_description=p@chr13:94958004..94958025,+
|description=CAGE_peak_at_chr13:94958004..94958025,+
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:94958004..94958025,+ | |||
|description=CAGE_peak_at_chr13:94958004..94958025,+ | |||
|id=chr13:94958004..94958025,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.06e-24!9;CL:0000680!2.16e-15!57;CL:0000056!2.16e-15!57;CL:0000355!2.16e-15!57;CL:0000594!6.62e-12!3;CL:0002504!1.90e-11!3;CL:1000279!1.90e-11!3;CL:1000280!1.90e-11!3;CL:0000183!2.79e-11!59;CL:0000393!4.10e-11!60;CL:0000211!4.10e-11!60;CL:0000187!4.44e-11!54;CL:0002554!1.69e-08!2;CL:0000515!2.77e-08!4;CL:0002195!3.82e-08!2;CL:0002571!3.82e-08!2;CL:0000055!9.07e-08!180;CL:0000048!9.83e-08!430;CL:0000723!1.77e-07!436;CL:0000034!3.80e-07!444;CL:0000222!9.11e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000594;1.25e-54;3!CL:0000188;9.34e-50;9!CL:0002554;8.98e-37;2!CL:0000680;6.61e-24;7!CL:0000187;7.96e-12;55!CL:0002570;4.03e-10;8!CL:0000393;1.24e-08;61!CL:0000211;1.24e-08;61!CL:0002504;2.97e-07;3!CL:1000279;2.97e-07;3!CL:1000280;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,2.17e-54,3;CL:0000188,1.03e-49,9;CL:0002554,6.83e-37,2;CL:0000187,1.27e-11,55;CL:0000680,5.15e-11,58;CL:0000056,5.15e-11,58;CL:0000355,5.15e-11,58;CL:0000393,1.82e-10,61;CL:0000211,1.82e-10,61;CL:0002570,4.22e-10,8;CL:0002504,3.16e-07,3;CL:1000279,3.16e-07,3;CL:1000280,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;5.42e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!4.41e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!9.46e-16!61;UBERON:0002036!9.46e-16!61;UBERON:0003082!9.46e-16!61;UBERON:0002385!4.26e-15!63;UBERON:0001015!4.26e-15!63;UBERON:0000383!4.26e-15!63;UBERON:0004290!4.14e-13!70;UBERON:0000486!1.65e-10!82;UBERON:0000914!2.50e-10!83;UBERON:0002329!2.50e-10!83;UBERON:0003077!2.50e-10!83;UBERON:0003059!2.50e-10!83;UBERON:0007282!2.50e-10!83;UBERON:0009618!2.50e-10!83;UBERON:0007285!2.50e-10!83;UBERON:0000490!3.89e-09!138;UBERON:0005256!8.73e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.94e-28;16!UBERON:0002036;3.94e-28;16!UBERON:0002385;3.84e-20;31!UBERON:0001015;3.84e-20;31!UBERON:0000383;3.84e-20;31!UBERON:0001473;5.67e-10;8!UBERON:0004536;5.67e-10;8!UBERON:0006558;5.67e-10;8!UBERON:0002465;3.69e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.71e-10,62;UBERON:0002036,2.71e-10,62;UBERON:0003082,2.71e-10,62;UBERON:0001473,5.29e-10,8;UBERON:0004536,5.29e-10,8;UBERON:0006558,5.29e-10,8;UBERON:0002385,5.74e-10,64;UBERON:0001015,5.74e-10,64;UBERON:0000383,5.74e-10,64;UBERON:0002329,5.74e-09,71;UBERON:0003059,5.74e-09,71;UBERON:0007282,5.74e-09,71;UBERON:0004290,5.74e-09,71;UBERON:0009618,5.74e-09,71;UBERON:0003077,7.70e-09,72;UBERON:0007285,7.70e-09,72;UBERON:0007524,1.02e-08,73;UBERON:0002465,3.50e-08,10;UBERON:0007503,3.82e-08,78;UBERON:0000486,1.22e-07,83 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73048408581408,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,2.535908257668,0,0,0,0,0,0.714889968290738,0,0,5.21177894869976,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.770243085573222,1.5350367472613,1.37836572484531,5.90811346775505,2.0302337147992,1.02271952899321,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0.719489830333259,1.37268514868027,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96579179256249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.318593534327405,0.899606224327209,0,0,0,0,0,0.380805212168795,0.406870733204662,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73048408581408,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,2.535908257668,0,0,0,0,0,0.714889968290738,0,0,5.21177894869976,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.770243085573222,1.5350367472613,1.37836572484531,5.90811346775505,2.0302337147992,1.02271952899321,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0.719489830333259,1.37268514868027,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96579179256249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.318593534327405,0.899606224327209,0,0,0,0,0,0.380805212168795,0.406870733204662,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:94958004..94958025,+ | |||
}} | }} |
Latest revision as of 17:29, 24 July 2015
Short description: | p@chr13:94958004..94958025, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94958004..94958025, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 2.17e-54 | 3 |
cell of skeletal muscle | 1.03e-49 | 9 |
fibroblast of lymphatic vessel | 6.83e-37 | 2 |
muscle cell | 1.27e-11 | 55 |
muscle precursor cell | 5.15e-11 | 58 |
myoblast | 5.15e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.15e-11 | 58 |
electrically responsive cell | 1.82e-10 | 61 |
electrically active cell | 1.82e-10 | 61 |
mesenchymal stem cell of adipose | 4.22e-10 | 8 |
enteric smooth muscle cell | 3.16e-07 | 3 |
smooth muscle cell of large intestine | 3.16e-07 | 3 |
smooth muscle cell of colon | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.71e-10 | 62 |
striated muscle tissue | 2.71e-10 | 62 |
myotome | 2.71e-10 | 62 |
lymphatic vessel | 5.29e-10 | 8 |
lymph vasculature | 5.29e-10 | 8 |
lymphatic part of lymphoid system | 5.29e-10 | 8 |
muscle tissue | 5.74e-10 | 64 |
musculature | 5.74e-10 | 64 |
musculature of body | 5.74e-10 | 64 |
somite | 5.74e-09 | 71 |
presomitic mesoderm | 5.74e-09 | 71 |
presumptive segmental plate | 5.74e-09 | 71 |
dermomyotome | 5.74e-09 | 71 |
trunk paraxial mesoderm | 5.74e-09 | 71 |
paraxial mesoderm | 7.70e-09 | 72 |
presumptive paraxial mesoderm | 7.70e-09 | 72 |
dense mesenchyme tissue | 1.02e-08 | 73 |
lymphoid system | 3.50e-08 | 10 |
epithelial vesicle | 3.82e-08 | 78 |
multilaminar epithelium | 1.22e-07 | 83 |