FFCP PHASE1:Hg19::chr13:88463464..88463481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_BC040238_5end | |association_with_transcript=5bp_to_BC040238_5end | ||
|cluster_id=chr13:88463464..88463481,- | |||
|description=CAGE_peak_2_at_BC040238_5end | |description=CAGE_peak_2_at_BC040238_5end | ||
|id=chr13:88463464..88463481,- | |id=chr13:88463464..88463481,- | ||
|ontology_enrichment_celltype=CL:0002150!1.33e-10!3;CL:0000861!1.33e-10!3;CL:0000066!4.11e-07!254 | |ontology_enrichment_celltype=CL:0002150!1.33e-10!3;CL:0000861!1.33e-10!3;CL:0000066!4.11e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002553;4.08e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,4.09e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.34e-07;5 | |||
|ontology_enrichment_disease=DOID:305!2.08e-28!106;DOID:0050687!1.13e-25!143;DOID:162!8.32e-25!235;DOID:14566!5.17e-24!239;DOID:0050686!2.21e-11!137;DOID:299!5.62e-08!25 | |ontology_enrichment_disease=DOID:305!2.08e-28!106;DOID:0050687!1.13e-25!143;DOID:162!8.32e-25!235;DOID:14566!5.17e-24!239;DOID:0050686!2.21e-11!137;DOID:299!5.62e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:0060085;7.49e-10;1!DOID:1799;7.49e-10;1!DOID:10165;7.49e-10;1!DOID:3165;7.49e-10;1!DOID:0060121;7.49e-10;1!DOID:2438;7.49e-10;1!DOID:4418;7.49e-10;1!DOID:3112;7.49e-10;1!DOID:1798;7.49e-10;1!DOID:305;1.39e-09;106!DOID:5409;2.31e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.70e-15,106;DOID:0050687,6.15e-14,143;DOID:162,7.51e-11,235;DOID:14566,1.49e-10,239;DOID:3112,6.88e-10,1;DOID:0060085,7.50e-10,1;DOID:3165,7.50e-10,1;DOID:0060121,7.50e-10,1;DOID:2438,7.50e-10,1;DOID:4418,7.50e-10,1;DOID:1799,8.17e-10,1;DOID:10165,8.17e-10,1;DOID:1798,8.17e-10,1;DOID:5409,1.69e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.12e-10!9;UBERON:0001041!2.18e-10!98;UBERON:0000077!5.41e-08!130;UBERON:0004921!6.13e-08!129;UBERON:0004185!6.13e-08!129;UBERON:0001007!7.60e-08!155;UBERON:0001555!7.60e-08!155;UBERON:0007026!7.60e-08!155;UBERON:0008947!7.95e-07!38;UBERON:0003258!7.95e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!2.12e-10!9;UBERON:0001041!2.18e-10!98;UBERON:0000077!5.41e-08!130;UBERON:0004921!6.13e-08!129;UBERON:0004185!6.13e-08!129;UBERON:0001007!7.60e-08!155;UBERON:0001555!7.60e-08!155;UBERON:0007026!7.60e-08!155;UBERON:0008947!7.95e-07!38;UBERON:0003258!7.95e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.55e-09;1!UBERON:0002046;1.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.08e-09,1;UBERON:0002046,1.19e-07,5;UBERON:0004117,1.19e-07,5;UBERON:0007689,1.19e-07,5;UBERON:0007123,1.19e-07,5;UBERON:0003091,1.19e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0837191349864,0.614481528616916,1.11838053946208,0.834245708559542,0,0.835218521685727,0,0.811367035427949,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,3.27512572210559,0,0,0,1.16828856491525,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.569261198172555,0,1.47698645169619,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0.832048038078832,0,0,0,0,0,3.57998425769615,3.28901926887835,3.20250282507516,0,0,0,0.822251547880505,2.58328995213887,0,0,0.64127056201227,0,0.599428828746391,0,0,1.20116498503375,0,0.869767748958028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0.633936370075881,0,0,0.344429959321631,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3571602503328,2.62035068016155,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.863710364874486,0,0,0,1.97610423125813,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0.955538938977433,0,1.27595303699816,0,0,0,0,0,0,0,0,3.61427462524672,0,1.96251696636676,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.499705779624645,1.42843150884526,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0135880080915,0,0,0,0,0.303114792872958,1.07185652062471,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@BC040238 | |short_description=p2@BC040238 | ||
}} | }} |
Latest revision as of 17:25, 24 July 2015
Short description: | p2@BC040238 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC040238_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_BC040238_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.09e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.08e-09 | 1 |
thyroid gland | 1.19e-07 | 5 |
pharyngeal pouch | 1.19e-07 | 5 |
thyroid diverticulum | 1.19e-07 | 5 |
pharyngeal pouch 2 | 1.19e-07 | 5 |
thyroid primordium | 1.19e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.70e-15 | 106 |
cell type cancer | 6.15e-14 | 143 |
cancer | 7.51e-11 | 235 |
disease of cellular proliferation | 1.49e-10 | 239 |
papillary adenocarcinoma | 6.88e-10 | 1 |
organ system benign neoplasm | 7.50e-10 | 1 |
skin benign neoplasm | 7.50e-10 | 1 |
integumentary system benign neoplasm | 7.50e-10 | 1 |
dermis tumor | 7.50e-10 | 1 |
cutaneous fibrous histiocytoma | 7.50e-10 | 1 |
islet cell tumor | 8.17e-10 | 1 |
endocrine pancreas cancer | 8.17e-10 | 1 |
pancreatic endocrine carcinoma | 8.17e-10 | 1 |
lung small cell carcinoma | 1.69e-09 | 4 |