FFCP PHASE1:Hg19::chr13:56606263..56606265,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:56606263..56606265,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr13:56606263..56606265,- | |description=CAGE_peak_at_chr13:56606263..56606265,- | ||
|id=chr13:56606263..56606265,- | |id=chr13:56606263..56606265,- | ||
|ontology_enrichment_celltype=CL:0000810!9.99e-16!1;CL:0000895!9.99e-16!1;CL:0002436!9.99e-16!1;CL:0002427!9.99e-16!1;CL:0002428!9.99e-16!1;CL:0002429!9.99e-16!1;CL:0002433!9.99e-16!1;CL:0002431!9.99e-16!1;CL:0002432!9.99e-16!1;CL:0000893!1.61e-08!2;CL:0002489!1.61e-08!2;CL:0000809!1.61e-08!2;CL:0000808!1.61e-08!2;CL:0000894!1.61e-08!2;CL:0000806!1.61e-08!2;CL:0000807!1.61e-08!2;CL:0000805!1.61e-08!2;CL:0002425!1.61e-08!2;CL:0002195!2.48e-08!2;CL:0002571!2.48e-08!2;CL:0000791!1.14e-07!18;CL:0000789!1.14e-07!18;CL:0002420!1.14e-07!18;CL:0002419!1.14e-07!18;CL:0000790!1.14e-07!18 | |ontology_enrichment_celltype=CL:0000810!9.99e-16!1;CL:0000895!9.99e-16!1;CL:0002436!9.99e-16!1;CL:0002427!9.99e-16!1;CL:0002428!9.99e-16!1;CL:0002429!9.99e-16!1;CL:0002433!9.99e-16!1;CL:0002431!9.99e-16!1;CL:0002432!9.99e-16!1;CL:0000893!1.61e-08!2;CL:0002489!1.61e-08!2;CL:0000809!1.61e-08!2;CL:0000808!1.61e-08!2;CL:0000894!1.61e-08!2;CL:0000806!1.61e-08!2;CL:0000807!1.61e-08!2;CL:0000805!1.61e-08!2;CL:0002425!1.61e-08!2;CL:0002195!2.48e-08!2;CL:0002571!2.48e-08!2;CL:0000791!1.14e-07!18;CL:0000789!1.14e-07!18;CL:0002420!1.14e-07!18;CL:0002419!1.14e-07!18;CL:0000790!1.14e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000062;2.45e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.37e-10,11;CL:0000375,2.37e-10,11;CL:0000335,2.37e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.37e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!5.20e-30!2;UBERON:0002757!5.20e-30!2;UBERON:0010134!5.20e-30!2;UBERON:0002784!5.20e-30!2;UBERON:0005408!5.20e-30!2;UBERON:0001899!5.20e-30!2;UBERON:0003296!1.55e-15!4;UBERON:0010133!1.55e-15!4;UBERON:0001894!2.80e-09!7;UBERON:0006222!2.80e-09!7;UBERON:0002368!7.77e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-50;2!UBERON:0002757;2.74e-50;2!UBERON:0010134;2.74e-50;2!UBERON:0005408;2.74e-50;2!UBERON:0001899;2.74e-50;2!UBERON:0003296;5.56e-26;4!UBERON:0010133;5.56e-26;4!UBERON:0002784;5.56e-26;4!UBERON:0001894;1.65e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.74e-50,2;UBERON:0002757,2.74e-50,2;UBERON:0010134,2.74e-50,2;UBERON:0005408,2.74e-50,2;UBERON:0001899,2.74e-50,2;UBERON:0003296,5.56e-26,4;UBERON:0010133,5.56e-26,4;UBERON:0002784,5.56e-26,4;UBERON:0001894,1.65e-15,7;UBERON:0006222,1.65e-15,7 | |||
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|short_description=p@chr13:56606263..56606265,- | |short_description=p@chr13:56606263..56606265,- | ||
}} | }} |
Latest revision as of 16:51, 24 July 2015
Short description: | p@chr13:56606263..56606265, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:56606263..56606265, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.37e-10 | 11 |
osteoprogenitor cell | 2.37e-10 | 11 |
mesenchyme condensation cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.74e-50 | 2 |
regional part of epithalamus | 2.74e-50 | 2 |
secretory circumventricular organ | 2.74e-50 | 2 |
circumventricular organ | 2.74e-50 | 2 |
epithalamus | 2.74e-50 | 2 |
gland of diencephalon | 5.56e-26 | 4 |
neuroendocrine gland | 5.56e-26 | 4 |
regional part of diencephalon | 5.56e-26 | 4 |
diencephalon | 1.65e-15 | 7 |
future diencephalon | 1.65e-15 | 7 |