FFCP PHASE1:Hg19::chr13:37479908..37479911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:37479908..37479911,- | |||
|description=CAGE_peak_at_chr13:37479908..37479911,- | |description=CAGE_peak_at_chr13:37479908..37479911,- | ||
|id=chr13:37479908..37479911,- | |id=chr13:37479908..37479911,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.38e-09;2!CL:0002567;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.02e-09,2;CL:0002567,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.38e-07;3!UBERON:0003057;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.24e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.29e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!6.57e-28!90;UBERON:0003075!8.44e-27!86;UBERON:0007284!8.44e-27!86;UBERON:0001049!4.88e-26!57;UBERON:0005068!4.88e-26!57;UBERON:0006241!4.88e-26!57;UBERON:0007135!4.88e-26!57;UBERON:0000073!4.84e-23!94;UBERON:0001016!4.84e-23!94;UBERON:0005743!1.09e-21!86;UBERON:0007023!2.09e-21!115;UBERON:0002616!3.59e-21!59;UBERON:0001017!7.43e-21!82;UBERON:0000955!8.24e-20!69;UBERON:0006238!8.24e-20!69;UBERON:0003056!1.29e-19!61;UBERON:0003080!2.83e-19!42;UBERON:0002780!3.80e-18!41;UBERON:0001890!3.80e-18!41;UBERON:0006240!3.80e-18!41;UBERON:0000924!4.61e-17!173;UBERON:0006601!4.61e-17!173;UBERON:0004121!4.31e-16!169;UBERON:0000033!6.10e-16!123;UBERON:0002020!6.65e-16!34;UBERON:0003528!6.65e-16!34;UBERON:0000153!1.82e-15!129;UBERON:0007811!1.82e-15!129;UBERON:0001893!3.97e-14!34;UBERON:0001869!1.24e-13!32;UBERON:0002791!2.16e-13!33;UBERON:0000956!2.80e-10!25;UBERON:0000203!2.80e-10!25;UBERON:0002619!3.90e-09!22;UBERON:0000477!9.81e-09!286;UBERON:0002298!1.03e-08!8;UBERON:0000483!1.72e-08!309;UBERON:0000119!3.18e-08!312;UBERON:0003076!6.22e-08!15;UBERON:0003057!6.22e-08!15;UBERON:0000025!1.06e-07!194;UBERON:0002308!1.82e-07!9;UBERON:0000125!1.82e-07!9;UBERON:0000475!2.77e-07!365;UBERON:0004111!3.48e-07!241;UBERON:0001950!4.08e-07!20;UBERON:0003296!8.25e-07!4;UBERON:0010133!8.25e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.38e-09;2!UBERON:0001954;1.38e-09;2!UBERON:0003022;1.38e-09;2!UBERON:0006955;1.38e-09;2!UBERON:0004801;1.38e-09;2!UBERON:0002421;1.38e-09;2!UBERON:0002600;1.38e-09;2!UBERON:0002619;4.63e-07;22!UBERON:0001896;8.38e-07;3!UBERON:0002240;8.38e-07;3!UBERON:0005174;8.38e-07;3!UBERON:0005290;8.38e-07;3!UBERON:0001137;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.95e-10,56;UBERON:0005068,2.95e-10,56;UBERON:0006241,2.95e-10,56;UBERON:0007135,2.95e-10,56;UBERON:0001954,1.03e-09,2;UBERON:0003022,1.03e-09,2;UBERON:0002421,1.03e-09,2;UBERON:0002600,1.03e-09,2;UBERON:0000007,1.22e-09,2;UBERON:0006955,2.02e-09,2;UBERON:0004801,2.02e-09,2;UBERON:0002346,6.09e-09,86;UBERON:0001016,2.12e-08,89;UBERON:0000073,1.04e-07,53;UBERON:0002616,1.04e-07,53;UBERON:0002619,4.04e-07,22;UBERON:0001017,5.75e-07,81;UBERON:0003075,5.75e-07,82;UBERON:0007284,5.75e-07,82;UBERON:0002240,9.12e-07,3;UBERON:0005174,9.12e-07,3;UBERON:0001137,9.12e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.989067717114227,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.844501632511974,0.19924798825107,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.694499979733169,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0,0.21787692703798,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0,1.16495949527454,0.709048640765013,0.329663433524666,0.26961417541674,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,1.14681839138014,0.887432412294818,0.0620964029413835,0.415045904808692,0,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0.256241518587947,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,1.1860729253635,0.157265941855896,0.218419276384028,0,0.425149840203366,3.09839410647505,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,1.56215619722769,0.413373593002368,0.253663240775627,0.546974809018219,0,0,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.455324382702595,0,0,0,0,0,0,0.111231401892069,0.313972371402056,0.471346769748006,0,3.65263488203798,0,0,0.285906176706625,0.790068058663633,0,0.173858272302579,0.801711364730253,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0.245148321753905,0,1.17785080268967,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0.315543124386369,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.803892390468535,0,0.620597975171371,0,0.714193294391221,0,0,0,0.509177266225319,0.606351566874658,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.989067717114227,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.844501632511974,0.19924798825107,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.694499979733169,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0,0.21787692703798,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0,1.16495949527454,0.709048640765013,0.329663433524666,0.26961417541674,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,1.14681839138014,0.887432412294818,0.0620964029413835,0.415045904808692,0,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0.256241518587947,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,1.1860729253635,0.157265941855896,0.218419276384028,0,0.425149840203366,3.09839410647505,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,1.56215619722769,0.413373593002368,0.253663240775627,0.546974809018219,0,0,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.455324382702595,0,0,0,0,0,0,0.111231401892069,0.313972371402056,0.471346769748006,0,3.65263488203798,0,0,0.285906176706625,0.790068058663633,0,0.173858272302579,0.801711364730253,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0.245148321753905,0,1.17785080268967,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0.315543124386369,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.803892390468535,0,0.620597975171371,0,0.714193294391221,0,0,0,0.509177266225319,0.606351566874658,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:37479908..37479911,- | |short_description=p@chr13:37479908..37479911,- | ||
}} | }} |
Latest revision as of 15:50, 24 July 2015
Short description: | p@chr13:37479908..37479911, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:37479908..37479911, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.02e-09 | 2 |
light melanocyte | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.95e-10 | 56 |
neural rod | 2.95e-10 | 56 |
future spinal cord | 2.95e-10 | 56 |
neural keel | 2.95e-10 | 56 |
Ammon's horn | 1.03e-09 | 2 |
lobe parts of cerebral cortex | 1.03e-09 | 2 |
hippocampal formation | 1.03e-09 | 2 |
limbic lobe | 1.03e-09 | 2 |
pituitary gland | 1.22e-09 | 2 |
uterine epithelium | 2.02e-09 | 2 |
cervix epithelium | 2.02e-09 | 2 |
neurectoderm | 6.09e-09 | 86 |
nervous system | 2.12e-08 | 89 |
regional part of nervous system | 1.04e-07 | 53 |
regional part of brain | 1.04e-07 | 53 |
regional part of cerebral cortex | 4.04e-07 | 22 |
central nervous system | 5.75e-07 | 81 |
neural plate | 5.75e-07 | 82 |
presumptive neural plate | 5.75e-07 | 82 |
spinal cord | 9.12e-07 | 3 |
dorsal region element | 9.12e-07 | 3 |
dorsum | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.29e-07 | 10 |