FFCP PHASE1:Hg19::chr13:29008224..29008235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:29008224..29008235,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr13:29008224..29008235,- | |description=CAGE_peak_at_chr13:29008224..29008235,- | ||
|id=chr13:29008224..29008235,- | |id=chr13:29008224..29008235,- | ||
|ontology_enrichment_celltype=CL:0002541;4.99e-45;3!CL:0000349;1.89e-16;19!CL:0002537;6.78e-08;5 | |ontology_enrichment_celltype=CL:0002541!1.50e-10!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;4.99e-45;3!CL:0000349;1.89e-16;19!CL:0002537;6.78e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.00e-45,3;CL:0000349,1.84e-16,19;CL:0002537,6.55e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.74e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003124;4.99e-45;3!UBERON:0000920;4.99e-45;3!UBERON:0005631;1.96e-30;10!UBERON:0000158;1.96e-30;10!UBERON:0000478;3.41e-13;24!UBERON:0002037;8.72e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-13!115;UBERON:0000476!1.50e-10!3;UBERON:0000920!1.50e-10!3;UBERON:0004151!1.81e-10!3;UBERON:0002771!2.42e-09!3;UBERON:0003124!1.02e-07!7;UBERON:0002081!1.49e-07!2;UBERON:0000341!4.13e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.99e-45;3!UBERON:0000920;4.99e-45;3!UBERON:0005631;1.96e-30;10!UBERON:0000158;1.96e-30;10!UBERON:0000478;3.41e-13;24!UBERON:0002037;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.00e-45,3;UBERON:0005631,5.01e-22,14;UBERON:0000158,5.01e-22,14;UBERON:0003124,5.35e-20,7;UBERON:0000478,3.34e-13,24;UBERON:0002037,8.02e-07,6;UBERON:0006215,8.02e-07,6 | |||
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| ||
|short_description=p@chr13:29008224..29008235,- | |short_description=p@chr13:29008224..29008235,- | ||
}} | }} |
Latest revision as of 15:25, 24 July 2015
Short description: | p@chr13:29008224..29008235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:29008224..29008235, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.00e-45 | 3 |
extraembryonic cell | 1.84e-16 | 19 |
amnion mesenchymal stem cell | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.00e-45 | 3 |
extraembryonic membrane | 5.01e-22 | 14 |
membranous layer | 5.01e-22 | 14 |
chorion | 5.35e-20 | 7 |
extraembryonic structure | 3.34e-13 | 24 |
cerebellum | 8.02e-07 | 6 |
rhombic lip | 8.02e-07 | 6 |