FFCP PHASE1:Hg19::chr13:23734436..23734448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:23734436..23734448,+ | |||
|description=CAGE_peak_at_chr13:23734436..23734448,+ | |description=CAGE_peak_at_chr13:23734436..23734448,+ | ||
|id=chr13:23734436..23734448,+ | |id=chr13:23734436..23734448,+ | ||
|ontology_enrichment_celltype=CL:0002334!1.12e-07!12;CL:0002579!2.15e-07!3;CL:0002615!2.88e-07!3;CL:0000057!4.31e-07!75;CL:0002580!5.98e-07!3 | |ontology_enrichment_celltype=CL:0002334!1.12e-07!12;CL:0002579!2.15e-07!3;CL:0002615!2.88e-07!3;CL:0000057!4.31e-07!75;CL:0002580!5.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002363;3.16e-20;2!CL:0002579;1.60e-13;3!CL:0000039;4.57e-13;7!CL:0000586;4.57e-13;7!CL:0002550;9.04e-11;1!CL:0002591;9.04e-11;1 | |ontology_enrichment_celltype_v019=CL:0002363;3.16e-20;2!CL:0002579;1.60e-13;3!CL:0000039;4.57e-13;7!CL:0000586;4.57e-13;7!CL:0002550;9.04e-11;1!CL:0002591;9.04e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002363,5.94e-20,2;CL:0000008,5.94e-20,2;CL:0002579,1.41e-13,3;CL:0000039,5.17e-13,7;CL:0000586,5.17e-13,7;CL:0002550,4.58e-11,1;CL:0002591,9.97e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000008;3.16e-20;2!UBERON:0009117;2.64e-09;10!UBERON:0005564;2.64e-09;10 | |ontology_enrichment_development_v019=CL:0000008;3.16e-20;2!UBERON:0009117;2.64e-09;10!UBERON:0005564;2.64e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;9.04e-11;1!DOID:4549;9.04e-11;1!DOID:5861;9.04e-11;1!DOID:6496;9.04e-11;1!DOID:2513;9.04e-11;1!DOID:5093;2.25e-10;4!DOID:1612;2.25e-10;4!DOID:3095;3.32e-07;22!DOID:2994;3.32e-07;22 | |ontology_enrichment_disease_v019=DOID:3371;9.04e-11;1!DOID:4549;9.04e-11;1!DOID:5861;9.04e-11;1!DOID:6496;9.04e-11;1!DOID:2513;9.04e-11;1!DOID:5093;2.25e-10;4!DOID:1612;2.25e-10;4!DOID:3095;3.32e-07;22!DOID:2994;3.32e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,7.46e-11,1;DOID:4549,7.46e-11,1;DOID:5861,7.46e-11,1;DOID:6496,7.46e-11,1;DOID:2513,9.05e-11,1;DOID:5093,1.54e-10,4;DOID:1612,1.54e-10,4;DOID:3095,3.73e-07,22;DOID:2994,3.73e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.29e-13!6;UBERON:0002358!5.29e-13!6;UBERON:0003684!5.29e-13!6;UBERON:0001178!5.29e-13!6;UBERON:0004457!8.41e-08!12;UBERON:0000042!8.41e-08!12;UBERON:0002323!2.15e-07!46 | |ontology_enrichment_uberon=UBERON:0003688!5.29e-13!6;UBERON:0002358!5.29e-13!6;UBERON:0003684!5.29e-13!6;UBERON:0001178!5.29e-13!6;UBERON:0004457!8.41e-08!12;UBERON:0000042!8.41e-08!12;UBERON:0002323!2.15e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;3.16e-20;2!UBERON:0001777;3.16e-20;2!UBERON:0003688;1.03e-14;6!UBERON:0002358;1.03e-14;6!UBERON:0003684;1.03e-14;6!UBERON:0001178;1.03e-14;6!UBERON:0000473;1.68e-11;8!UBERON:0003891;1.36e-10;4!UBERON:0000964;1.36e-10;4!UBERON:0010409;1.36e-10;4!UBERON:0004457;5.36e-10;9!UBERON:0000042;5.36e-10;9!UBERON:0010313;3.55e-09;10!UBERON:0003135;1.67e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0003566;3.16e-20;2!UBERON:0001777;3.16e-20;2!UBERON:0003688;1.03e-14;6!UBERON:0002358;1.03e-14;6!UBERON:0003684;1.03e-14;6!UBERON:0001178;1.03e-14;6!UBERON:0000473;1.68e-11;8!UBERON:0003891;1.36e-10;4!UBERON:0000964;1.36e-10;4!UBERON:0010409;1.36e-10;4!UBERON:0004457;5.36e-10;9!UBERON:0000042;5.36e-10;9!UBERON:0010313;3.55e-09;10!UBERON:0003135;1.67e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,5.94e-20,2;UBERON:0001777,5.94e-20,2;UBERON:0003688,1.30e-14,6;UBERON:0002358,1.30e-14,6;UBERON:0003684,1.30e-14,6;UBERON:0001178,1.30e-14,6;UBERON:0000473,1.87e-11,8;UBERON:0003891,1.86e-10,4;UBERON:0000964,1.86e-10,4;UBERON:0010409,1.86e-10,4;UBERON:0004348,1.86e-10,4;UBERON:0005427,1.86e-10,4;UBERON:0010313,4.38e-09,10;UBERON:0002342,4.38e-09,10;UBERON:0005062,4.38e-09,10;UBERON:0003135,1.81e-08,11;UBERON:0004457,1.43e-07,12;UBERON:0000042,1.43e-07,12;UBERON:0002323,5.22e-07,46 | |||
|phase1_expression=0,0,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,1.87457145467037,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.453728732640084,0,0,0,0,0.206105058476878,0,0,0.843881661206331,0.487185025805993,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28065813717227,1.03993478527958,0,0,0.234817388471643,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.460385919864187,0.561320188866147,1.66580894032411,0.511707249066704,1.12597744800525,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0.773365746336976,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.989838023675989,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,0,0,0,0,0,0.344743373241465,0.291604613383254,2.60437492399938,0,0,0,0,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5003541537555,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,2.34167452903441,0.144921028610825,0,0.233713309847224,0,0,0,0,2.28840068396924,0,0.310874401165561,0,0,0.899606224327209,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,1.03018711554838,0,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81843360035278,0,0,0,1.10086159299127,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,1.1218771271618,2.93939145792117,2.02168778976659,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,1.87457145467037,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.453728732640084,0,0,0,0,0.206105058476878,0,0,0.843881661206331,0.487185025805993,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28065813717227,1.03993478527958,0,0,0.234817388471643,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.460385919864187,0.561320188866147,1.66580894032411,0.511707249066704,1.12597744800525,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0.773365746336976,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.989838023675989,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,0,0,0,0,0,0.344743373241465,0.291604613383254,2.60437492399938,0,0,0,0,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5003541537555,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,2.34167452903441,0.144921028610825,0,0.233713309847224,0,0,0,0,2.28840068396924,0,0.310874401165561,0,0,0.899606224327209,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,1.03018711554838,0,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81843360035278,0,0,0,1.10086159299127,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,1.1218771271618,2.93939145792117,2.02168778976659,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:23734436..23734448,+ | |short_description=p@chr13:23734436..23734448,+ | ||
}} | }} |
Latest revision as of 15:07, 24 July 2015
Short description: | p@chr13:23734436..23734448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23734436..23734448, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 5.94e-20 | 2 |
migratory cranial neural crest cell | 5.94e-20 | 2 |
omentum preadipocyte | 1.41e-13 | 3 |
germ line cell | 5.17e-13 | 7 |
germ cell | 5.17e-13 | 7 |
fibroblast of the conjuctiva | 4.58e-11 | 1 |
smooth muscle cell of the pulmonary artery | 9.97e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 5.94e-20 | 2 |
substantia propria of cornea | 5.94e-20 | 2 |
omentum | 1.30e-14 | 6 |
peritoneum | 1.30e-14 | 6 |
abdominal cavity | 1.30e-14 | 6 |
visceral peritoneum | 1.30e-14 | 6 |
testis | 1.87e-11 | 8 |
stroma | 1.86e-10 | 4 |
cornea | 1.86e-10 | 4 |
eye surface | 1.86e-10 | 4 |
optic eminence | 1.86e-10 | 4 |
corneal primordium | 1.86e-10 | 4 |
neural crest-derived structure | 4.38e-09 | 10 |
neural crest | 4.38e-09 | 10 |
neural fold | 4.38e-09 | 10 |
male reproductive organ | 1.81e-08 | 11 |
cavity lining | 1.43e-07 | 12 |
serous membrane | 1.43e-07 | 12 |
body cavity | 5.22e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.46e-11 | 1 |
extraosseous chondrosarcoma | 7.46e-11 | 1 |
myxoid chondrosarcoma | 7.46e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 7.46e-11 | 1 |
basal cell carcinoma | 9.05e-11 | 1 |
thoracic cancer | 1.54e-10 | 4 |
breast cancer | 1.54e-10 | 4 |
germ cell and embryonal cancer | 3.73e-07 | 22 |
germ cell cancer | 3.73e-07 | 22 |