FFCP PHASE1:Hg19::chr13:114147936..114147949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114147936..114147949,+ | |||
|description=CAGE_peak_at_chr13:114147936..114147949,+ | |description=CAGE_peak_at_chr13:114147936..114147949,+ | ||
|id=chr13:114147936..114147949,+ | |id=chr13:114147936..114147949,+ | ||
|ontology_enrichment_celltype=CL:0002178;1.51e-07;3!CL:0000182;7.73e-07;12 | |ontology_enrichment_celltype=CL:0000223!3.29e-16!59;CL:0000066!1.69e-14!254;CL:0002076!1.93e-10!43;CL:0000181!9.87e-07!12;CL:0000417!9.87e-07!12;CL:0000668!9.87e-07!12;CL:0000414!9.87e-07!12;CL:0000412!9.87e-07!12;CL:0000182!9.87e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002178;1.51e-07;3!CL:0000182;7.73e-07;12 | ||
|ontology_enrichment_disease=DOID:0050615;1.93e-07;16 | |ontology_enrichment_celltype_v019_2=CL:0002178,1.75e-07,3;CL:0000066,4.57e-07,253;CL:0000182,8.24e-07,12 | ||
|ontology_enrichment_uberon=UBERON:0002365;2.68e-11;31!UBERON:0002330;2.68e-11;31!UBERON:0003127;1.01e-10;2!UBERON:0006562;1.29e-10;2!UBERON:0002107;7.53e-09;19!UBERON:0006925;7.53e-09;19!UBERON:0002423;7.60e-09;25 | |ontology_enrichment_development_v019=UBERON:0001041;3.79e-09;30!UBERON:0006595;7.24e-07;86 | ||
|ontology_enrichment_disease=DOID:305!6.65e-25!106;DOID:0050687!6.46e-17!143;DOID:162!9.95e-11!235;DOID:14566!3.90e-10!239;DOID:7!5.63e-09!39;DOID:1749!7.41e-09!14;DOID:299!3.64e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.93e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.65e-12,106;DOID:0050687,6.17e-10,143;DOID:0050615,2.15e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.89e-21!169;UBERON:0000925!5.89e-21!169;UBERON:0006595!5.89e-21!169;UBERON:0004921!2.19e-20!129;UBERON:0004185!2.19e-20!129;UBERON:0001007!1.05e-19!155;UBERON:0001555!1.05e-19!155;UBERON:0007026!1.05e-19!155;UBERON:0000077!3.76e-17!130;UBERON:0001041!1.58e-15!98;UBERON:0000466!2.15e-10!126;UBERON:0001004!4.96e-10!72;UBERON:0005177!7.42e-10!107;UBERON:0005911!1.22e-09!82;UBERON:0009497!2.65e-09!25;UBERON:0000015!2.65e-09!25;UBERON:0002423!2.65e-09!25;UBERON:0006235!2.65e-09!25;UBERON:0004161!2.65e-09!25;UBERON:0008835!1.88e-08!22;UBERON:0003894!1.88e-08!22;UBERON:0007499!2.24e-08!25;UBERON:0000344!2.37e-08!12;UBERON:0009854!6.16e-08!23;UBERON:0009856!6.55e-08!26;UBERON:0003104!9.53e-08!238;UBERON:0009142!9.53e-08!238;UBERON:0000065!1.34e-07!53;UBERON:0003929!1.65e-07!54;UBERON:0009569!1.86e-07!113;UBERON:0005409!2.28e-07!35;UBERON:0000160!6.99e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.68e-11;31!UBERON:0002330;2.68e-11;31!UBERON:0003127;1.01e-10;2!UBERON:0006562;1.29e-10;2!UBERON:0002107;7.53e-09;19!UBERON:0006925;7.53e-09;19!UBERON:0002423;7.60e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,8.21e-16,87;UBERON:0004921,1.18e-14,118;UBERON:0002365,2.35e-11,31;UBERON:0002330,2.35e-11,31;UBERON:0007499,2.61e-11,25;UBERON:0001007,4.96e-11,145;UBERON:0001555,4.96e-11,145;UBERON:0007026,4.96e-11,145;UBERON:0009856,7.94e-11,26;UBERON:0003127,9.41e-11,2;UBERON:0004119,1.05e-10,160;UBERON:0000925,1.05e-10,160;UBERON:0006595,1.05e-10,160;UBERON:0008835,3.63e-10,22;UBERON:0003894,3.63e-10,22;UBERON:0005177,4.87e-10,101;UBERON:0009854,1.11e-09,23;UBERON:0009497,7.86e-09,25;UBERON:0000015,7.86e-09,25;UBERON:0002423,7.86e-09,25;UBERON:0006235,7.86e-09,25;UBERON:0004161,7.86e-09,25;UBERON:0002107,8.05e-09,19;UBERON:0006925,8.05e-09,19;UBERON:0008836,8.05e-09,19;UBERON:0009569,1.57e-07,112;UBERON:0000949,2.67e-07,45;UBERON:0001004,5.47e-07,74 | |||
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| ||
|short_description=p@chr13:114147936..114147949,+ | |short_description=p@chr13:114147936..114147949,+ | ||
}} | }} |
Latest revision as of 14:48, 24 July 2015
Short description: | p@chr13:114147936..114147949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114147936..114147949, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.75e-07 | 3 |
epithelial cell | 4.57e-07 | 253 |
hepatocyte | 8.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
foregut | 8.21e-16 | 87 |
subdivision of digestive tract | 1.18e-14 | 118 |
exocrine gland | 2.35e-11 | 31 |
exocrine system | 2.35e-11 | 31 |
epithelial sac | 2.61e-11 | 25 |
digestive system | 4.96e-11 | 145 |
digestive tract | 4.96e-11 | 145 |
primitive gut | 4.96e-11 | 145 |
sac | 7.94e-11 | 26 |
open tracheal system trachea | 9.41e-11 | 2 |
endoderm-derived structure | 1.05e-10 | 160 |
endoderm | 1.05e-10 | 160 |
presumptive endoderm | 1.05e-10 | 160 |
hepatic diverticulum | 3.63e-10 | 22 |
liver primordium | 3.63e-10 | 22 |
trunk region element | 4.87e-10 | 101 |
digestive tract diverticulum | 1.11e-09 | 23 |
epithelium of foregut-midgut junction | 7.86e-09 | 25 |
anatomical boundary | 7.86e-09 | 25 |
hepatobiliary system | 7.86e-09 | 25 |
foregut-midgut junction | 7.86e-09 | 25 |
septum transversum | 7.86e-09 | 25 |
liver | 8.05e-09 | 19 |
digestive gland | 8.05e-09 | 19 |
liver bud | 8.05e-09 | 19 |
subdivision of trunk | 1.57e-07 | 112 |
endocrine system | 2.67e-07 | 45 |
respiratory system | 5.47e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.65e-12 | 106 |
cell type cancer | 6.17e-10 | 143 |
respiratory system cancer | 2.15e-07 | 16 |