FFCP PHASE1:Hg19::chr13:110829031..110829044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:110829031..110829044,+ | |||
|coexpression_cluster_id=C823 | |||
|description=CAGE_peak_at_chr13:110829031..110829044,+ | |||
|id=chr13:110829031..110829044,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.82e-12!180;CL:0000222!8.97e-11!119;CL:0000183!9.69e-09!59;CL:0000057!1.11e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.18e-09;15!CL:0000669;3.42e-08;4!CL:1000497;3.72e-08;17!CL:0002518;3.72e-08;17!CL:0000115;5.83e-08;36!CL:0002575;9.84e-08;2!CL:1000746;1.28e-07;7!CL:1000612;1.28e-07;7!CL:0002139;2.78e-07;24!CL:0002195;3.61e-07;2!CL:0002571;3.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,3.11e-09,15;CL:0000115,2.31e-08,36;CL:0000669,2.78e-08,4;CL:1000497,5.05e-08,17;CL:0002518,5.05e-08,17;CL:0002575,7.38e-08,2;CL:1000746,1.74e-07,7;CL:1000612,1.74e-07,7;CL:0002139,3.06e-07,24;CL:0002195,3.41e-07,2;CL:0002571,3.41e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.39e-11!79;UBERON:0007798!1.39e-11!79;UBERON:0003914!1.02e-10!118;UBERON:0001009!9.85e-10!113;UBERON:0000055!2.45e-09!69;UBERON:0004535!3.16e-09!110;UBERON:0004872!2.60e-08!84;UBERON:0005256!1.27e-07!143;UBERON:0000490!1.52e-07!138;UBERON:0001981!2.78e-07!60;UBERON:0007500!2.78e-07!60;UBERON:0004537!2.78e-07!60;UBERON:0006965!2.78e-07!60;UBERON:0002385!8.61e-07!63;UBERON:0001015!8.61e-07!63;UBERON:0000383!8.61e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.18e-09;15!UBERON:0004819;2.18e-09;15!UBERON:0001285;2.18e-09;15!UBERON:0007684;2.18e-09;15!UBERON:0000074;1.28e-07;7!UBERON:0001229;1.28e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.31e-13,117;UBERON:0004211,3.11e-09,15;UBERON:0009773,3.11e-09,15;UBERON:0001231,3.11e-09,15;UBERON:0001285,3.11e-09,15;UBERON:0007684,3.11e-09,15;UBERON:0004208,3.11e-09,15;UBERON:0006555,1.37e-08,16;UBERON:0004819,1.37e-08,16;UBERON:0010532,1.74e-07,7;UBERON:0000074,1.74e-07,7;UBERON:0001229,1.74e-07,7;UBERON:0001230,1.74e-07,7;UBERON:0003220,1.74e-07,7;UBERON:0005749,1.74e-07,7;UBERON:0004199,1.74e-07,7;UBERON:0004209,1.74e-07,7;UBERON:0004198,1.74e-07,7;UBERON:0009569,6.16e-07,112;UBERON:0002417,6.43e-07,60;UBERON:0000916,6.43e-07,60 | |||
|phase1_expression=0,1.2846031433459,0,1.0007329835313,4.46961094427288,0,0,0.631719873426831,2.87304191019822,1.22866968250754,0,0,1.05506791291381,0,0,1.34465029290355,1.20538905604795,1.46062018077475,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,1.0843174571537,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0,0.419499436209906,1.10047216776027,0,0.516833518338658,0.71153252537342,0.66944122552934,2.01414658554573,0,5.12530320851156,0.735326160691737,3.24056779152704,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,1.49091585508596,1.13967460498122,0.132409180813219,0.286836620748814,0,0.560677600142307,0,8.6333641946006,0,1.61652806483626,1.47115712802113,0.756787138224657,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0.741800787835671,0,0,0.168336113954066,0,0,0,1.22595118319608,0.150238058906597,1.58805056424029,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0.37223371266318,0.168776332241266,0.292311015483596,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.508681776931463,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0.117408694235822,1.87676382089396,5.55582615091933,5.13686211033415,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0.87192013766656,0.7333828582095,0.258543431515556,0,2.535908257668,2.12750493267896,1.04007436911366,0,0,0,2.14466990487221,0.542621605391443,0,0.977208552881205,1.42156779497018,1.58390374586686,0.301439377059586,0,1.29964888536674,0,0,0,4.31324739884849,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,1.87173775377726,2.14114786556594,2.52323864054295,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0,0,2.93701736194111,4.80400793335198,0,0,0,0,0,0,0,0.61384789315225,0,0.256278298511402,0.511707249066704,2.41280881715411,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0,0,1.07821471946181,0.784349769176855,1.46139224653261,2.00548094896464,2.27466768141793,1.02056223165909,0.863663664408557,4.62681758070868,0.270946437543853,3.51182841698397,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.137836572484531,0,0,0.0852266274161009,0.623224249527161,0,0.384380134730212,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0,0,2.21465597303108,0.762520775695299,0.511795582622668,0,0,0,0.179872457583315,0.823611089208164,0.235624804691373,0,0,0.421258456238981,0.975267478179181,1.21856744815642,0,0.409499734223957,0.141405431953713,0,0,2.65375590096488,0,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.286822704408103,0.88424136911809,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0.276283915531148,0,0,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,1.60515529459758,0,0,0,0,0.394584402849391,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0,0.671834724867263,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.367182116944987,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0.761610424337591,0,0.545545977607678,0.214821114084977,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0,0,0.38582807654183,0.168942440653073,1.28120759293973,0.345430341731199,0.607719912354764,0,0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| |||
|short_description=p@chr13:110829031..110829044,+ | |||
}} |
Latest revision as of 14:29, 24 July 2015
Short description: | p@chr13:110829031..110829044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110829031..110829044, + |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 3.11e-09 | 15 |
endothelial cell | 2.31e-08 | 36 |
pericyte cell | 2.78e-08 | 4 |
kidney cell | 5.05e-08 | 17 |
kidney epithelial cell | 5.05e-08 | 17 |
central nervous system pericyte | 7.38e-08 | 2 |
glomerular cell | 1.74e-07 | 7 |
kidney corpuscule cell | 1.74e-07 | 7 |
endothelial cell of vascular tree | 3.06e-07 | 24 |
hepatic stem cell | 3.41e-07 | 2 |
hepatic mesenchymal stem cell | 3.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.31e-13 | 117 |
nephron epithelium | 3.11e-09 | 15 |
renal tubule | 3.11e-09 | 15 |
nephron tubule | 3.11e-09 | 15 |
nephron | 3.11e-09 | 15 |
uriniferous tubule | 3.11e-09 | 15 |
nephrogenic mesenchyme | 3.11e-09 | 15 |
excretory tube | 1.37e-08 | 16 |
kidney epithelium | 1.37e-08 | 16 |
primitive nephron | 1.74e-07 | 7 |
renal glomerulus | 1.74e-07 | 7 |
renal corpuscle | 1.74e-07 | 7 |
glomerular capsule | 1.74e-07 | 7 |
metanephric mesenchyme | 1.74e-07 | 7 |
glomerular tuft | 1.74e-07 | 7 |
S-shaped body | 1.74e-07 | 7 |
renal vesicle | 1.74e-07 | 7 |
comma-shaped body | 1.74e-07 | 7 |
subdivision of trunk | 6.16e-07 | 112 |
abdominal segment of trunk | 6.43e-07 | 60 |
abdomen | 6.43e-07 | 60 |