FFCP PHASE1:Hg19::chr13:110774197..110774208,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110774197..110774208,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr13:110774197..110774208,+ | |description=CAGE_peak_at_chr13:110774197..110774208,+ | ||
|id=chr13:110774197..110774208,+ | |id=chr13:110774197..110774208,+ | ||
|ontology_enrichment_celltype=CL:0000080!7.86e-12!6;CL:0000946!2.46e-08!1;CL:0000786!2.46e-08!1;CL:0000980!2.46e-08!1;CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24 | |ontology_enrichment_celltype=CL:0000080!7.86e-12!6;CL:0000946!2.46e-08!1;CL:0000786!2.46e-08!1;CL:0000980!2.46e-08!1;CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.40e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.57e-10,24;CL:0000826,5.57e-10,24;CL:0000988,6.97e-09,177;CL:0000838,4.72e-08,52;CL:0000542,6.59e-08,53;CL:0000051,6.59e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!6.03e-09!1;DOID:0050177!6.03e-09!1;DOID:0050427!6.03e-09!1 | |ontology_enrichment_disease=DOID:630!6.03e-09!1;DOID:0050177!6.03e-09!1;DOID:0050427!6.03e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:630;2.78e-26;1!DOID:0050177;2.78e-26;1!DOID:0050427;2.78e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.78e-26,1;DOID:0050177,2.78e-26,1;DOID:0050427,2.78e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.11e-09!7;UBERON:0002084!1.02e-08!1;UBERON:0002082!1.02e-08!1;UBERON:0004706!1.02e-08!1;UBERON:0001154!1.10e-08!1;UBERON:0001153!1.10e-08!1;UBERON:0002372!1.18e-08!1;UBERON:0001961!1.18e-08!1;UBERON:0001744!1.18e-08!1;UBERON:0001735!1.18e-08!1;UBERON:0002370!5.62e-08!4;UBERON:0005058!5.62e-08!4;UBERON:0009113!5.62e-08!4;UBERON:0003295!5.62e-08!4;UBERON:0005562!5.62e-08!4;UBERON:0002331!2.80e-07!10;UBERON:0000358!2.80e-07!10;UBERON:0000307!2.80e-07!10;UBERON:0000091!2.80e-07!10;UBERON:0000087!2.80e-07!10;UBERON:0007806!2.80e-07!10;UBERON:0008780!2.80e-07!10;UBERON:0005728!2.80e-07!10;UBERON:0001042!5.96e-07!10;UBERON:0009145!5.96e-07!10;UBERON:0000974!7.03e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.53e-23;10!UBERON:0000178;1.37e-15;15!UBERON:0000179;1.37e-15;15!UBERON:0000463;1.37e-15;15!UBERON:0000478;5.23e-10;24!UBERON:0002390;9.66e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.42e-23,10;UBERON:0000358,6.42e-23,10;UBERON:0000307,6.42e-23,10;UBERON:0000091,6.42e-23,10;UBERON:0000087,6.42e-23,10;UBERON:0007010,6.42e-23,10;UBERON:0007806,6.42e-23,10;UBERON:0008780,6.42e-23,10;UBERON:0005728,6.42e-23,10;UBERON:0000178,1.52e-15,15;UBERON:0000179,1.52e-15,15;UBERON:0000463,1.52e-15,15;UBERON:0000478,5.57e-10,24 | |||
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|short_description=p@chr13:110774197..110774208,+ | |short_description=p@chr13:110774197..110774208,+ | ||
}} | }} |
Latest revision as of 14:28, 24 July 2015
Short description: | p@chr13:110774197..110774208, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110774197..110774208, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.57e-10 | 24 |
pro-B cell | 5.57e-10 | 24 |
hematopoietic cell | 6.97e-09 | 177 |
lymphoid lineage restricted progenitor cell | 4.72e-08 | 52 |
lymphocyte | 6.59e-08 | 53 |
common lymphoid progenitor | 6.59e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.42e-23 | 10 |
blastocyst | 6.42e-23 | 10 |
blastula | 6.42e-23 | 10 |
bilaminar disc | 6.42e-23 | 10 |
inner cell mass | 6.42e-23 | 10 |
cleaving embryo | 6.42e-23 | 10 |
connecting stalk | 6.42e-23 | 10 |
inner cell mass derived epiblast | 6.42e-23 | 10 |
extraembryonic mesoderm | 6.42e-23 | 10 |
blood | 1.52e-15 | 15 |
haemolymphatic fluid | 1.52e-15 | 15 |
organism substance | 1.52e-15 | 15 |
extraembryonic structure | 5.57e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.78e-26 | 1 |
monogenic disease | 2.78e-26 | 1 |
xeroderma pigmentosum | 2.78e-26 | 1 |