FFCP PHASE1:Hg19::chr13:109148029..109148041,+: Difference between revisions
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|id=chr13:109148029..109148041,+
|short_description=p@chr13:109148029..109148041,+
|description=CAGE_peak_at_chr13:109148029..109148041,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:109148029..109148041,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr13:109148029..109148041,+ | |||
|id=chr13:109148029..109148041,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.43e-07!7;CL:0000126!1.43e-07!7;CL:0000127!1.43e-07!7;CL:0002453!1.43e-07!7;CL:0002605!2.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002567;3.88e-12;3!CL:0002566;1.68e-09;1!CL:0000148;5.00e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.37e-12,3;CL:0002566,2.67e-09,1;CL:0000148,5.38e-08,10;CL:0000541,5.38e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.78e-12;31!DOID:8552;7.82e-10;1!DOID:9119;1.68e-09;1!DOID:1240;1.52e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.35e-12,31;DOID:8552,8.91e-10,1;DOID:1240,1.15e-09,39;DOID:9119,1.48e-09,1;DOID:2531,3.27e-07,51;DOID:0060083,3.27e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000956!2.99e-30!25;UBERON:0000203!2.99e-30!25;UBERON:0001049!3.19e-30!57;UBERON:0005068!3.19e-30!57;UBERON:0006241!3.19e-30!57;UBERON:0007135!3.19e-30!57;UBERON:0001017!3.71e-29!82;UBERON:0002020!5.03e-28!34;UBERON:0003528!5.03e-28!34;UBERON:0001869!9.47e-28!32;UBERON:0005743!2.58e-27!86;UBERON:0000073!5.28e-27!94;UBERON:0001016!5.28e-27!94;UBERON:0002616!7.07e-27!59;UBERON:0000955!2.19e-26!69;UBERON:0006238!2.19e-26!69;UBERON:0001893!8.73e-26!34;UBERON:0002619!8.38e-25!22;UBERON:0002780!1.60e-24!41;UBERON:0001890!1.60e-24!41;UBERON:0006240!1.60e-24!41;UBERON:0002791!3.55e-24!33;UBERON:0003080!8.75e-24!42;UBERON:0002346!1.22e-22!90;UBERON:0001950!4.46e-21!20;UBERON:0003075!5.57e-21!86;UBERON:0007284!5.57e-21!86;UBERON:0003056!3.56e-17!61;UBERON:0000924!8.41e-16!173;UBERON:0006601!8.41e-16!173;UBERON:0007023!7.18e-15!115;UBERON:0000033!1.18e-14!123;UBERON:0004121!1.65e-14!169;UBERON:0000153!1.59e-13!129;UBERON:0007811!1.59e-13!129;UBERON:0000349!6.02e-12!5;UBERON:0001871!4.33e-10!7;UBERON:0003076!1.29e-07!15;UBERON:0003057!1.29e-07!15;UBERON:0004733!1.45e-07!12;UBERON:0002028!1.45e-07!12;UBERON:0007277!1.45e-07!12;UBERON:0001872!1.75e-07!5;UBERON:0004732!6.67e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.44e-08;25!UBERON:0000203;4.44e-08;25!UBERON:0001950;9.01e-07;20!UBERON:0000922;9.46e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.28e-08,25;UBERON:0000203,4.28e-08,25;UBERON:0001950,8.62e-07,20 | |||
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| ||
|short_description=p@chr13:109148029..109148041,+ | |||
}} | }} |
Latest revision as of 14:25, 24 July 2015
Short description: | p@chr13:109148029..109148041, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:109148029..109148041, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.37e-12 | 3 |
dark melanocyte | 2.67e-09 | 1 |
melanocyte | 5.38e-08 | 10 |
melanoblast | 5.38e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.28e-08 | 25 |
pallium | 4.28e-08 | 25 |
neocortex | 8.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.35e-12 | 31 |
chronic myeloid leukemia | 8.91e-10 | 1 |
leukemia | 1.15e-09 | 39 |
acute myeloid leukemia | 1.48e-09 | 1 |
hematologic cancer | 3.27e-07 | 51 |
immune system cancer | 3.27e-07 | 51 |