FFCP PHASE1:Hg19::chr12:97926446..97926450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:97926446..97926450,+ | |||
|coexpression_cluster_id=C1023 | |coexpression_cluster_id=C1023 | ||
|description=CAGE_peak_at_chr12:97926446..97926450,+ | |description=CAGE_peak_at_chr12:97926446..97926450,+ | ||
|id=chr12:97926446..97926450,+ | |id=chr12:97926446..97926450,+ | ||
|ontology_enrichment_celltype=CL:0002322!8.54e-12!5;CL:0000064!6.30e-09!3;CL:0005012!6.30e-09!3;CL:0000067!6.30e-09!3;CL:0002304!6.30e-09!3 | |ontology_enrichment_celltype=CL:0002322!8.54e-12!5;CL:0000064!6.30e-09!3;CL:0005012!6.30e-09!3;CL:0000067!6.30e-09!3;CL:0002304!6.30e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.02e-30;3!CL:0000067;2.02e-30;3!CL:0005012;2.02e-30;3!CL:0002304;2.02e-30;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.16e-31,3;CL:0000067,8.16e-31,3;CL:0005012,8.16e-31,3;CL:0002304,8.16e-31,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.69e-21;2!UBERON:0005754;1.06e-11;1!UBERON:0007123;5.27e-09;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;1.85e-31;3!UBERON:0004054;1.85e-31;3!UBERON:0001778;2.02e-30;3!UBERON:0001775;2.02e-30;3!UBERON:0005904;9.01e-24;4!UBERON:0000488;5.37e-23;4!UBERON:0003296;9.78e-23;4!UBERON:0010133;9.78e-23;4!UBERON:0000341;3.29e-21;2!UBERON:0000007;1.16e-20;2!UBERON:0002203;1.51e-15;6!UBERON:0001768;1.51e-15;6!UBERON:0002200;1.51e-15;6!UBERON:0001894;2.89e-13;7!UBERON:0001000;9.07e-12;1!UBERON:0005352;9.07e-12;1!UBERON:0000998;1.06e-11;1!UBERON:0006868;1.06e-11;1!UBERON:0001301;1.45e-11;1!UBERON:0002134;3.28e-11;1!UBERON:0005208;3.28e-11;1!UBERON:0004145;3.28e-11;1!UBERON:0005946;3.28e-11;1!UBERON:0005965;3.28e-11;1!UBERON:0002078;3.28e-11;1!UBERON:0000058;7.41e-10;10!UBERON:0003135;5.26e-09;11!UBERON:0002046;5.27e-09;5!UBERON:0007625;9.88e-09;11!UBERON:0006876;9.88e-09;11!UBERON:0000974;1.11e-07;6!UBERON:0001801;5.80e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.96e-31,3;UBERON:0004054,1.96e-31,3;UBERON:0001778,8.16e-31,3;UBERON:0001775,8.16e-31,3;UBERON:0005904,9.38e-24,4;UBERON:0000488,2.73e-23,4;UBERON:0003296,2.58e-22,4;UBERON:0010133,2.58e-22,4;UBERON:0000341,5.20e-21,2;UBERON:0000007,2.35e-20,2;UBERON:0002203,9.62e-16,6;UBERON:0001768,9.62e-16,6;UBERON:0002200,9.62e-16,6;UBERON:0001894,4.99e-13,7;UBERON:0006222,4.99e-13,7;UBERON:0001000,9.57e-12,1;UBERON:0005352,9.57e-12,1;UBERON:0000998,1.06e-11,1;UBERON:0006868,1.06e-11,1;UBERON:0001301,1.45e-11,1;UBERON:0002134,3.28e-11,1;UBERON:0005208,3.28e-11,1;UBERON:0005946,3.28e-11,1;UBERON:0005965,3.28e-11,1;UBERON:0002078,3.28e-11,1;UBERON:0002046,4.15e-09,5;UBERON:0004117,4.15e-09,5;UBERON:0007689,4.15e-09,5;UBERON:0007123,4.15e-09,5;UBERON:0003091,4.15e-09,5;UBERON:0003135,5.33e-09,11;UBERON:0007625,7.78e-09,11;UBERON:0006876,7.78e-09,11;UBERON:0001801,4.82e-07,14;UBERON:0002368,5.97e-07,35 | |||
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|short_description=p@chr12:97926446..97926450,+ | |short_description=p@chr12:97926446..97926450,+ | ||
}} | }} |
Latest revision as of 13:58, 24 July 2015
Short description: | p@chr12:97926446..97926450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97926446..97926450, + |
Coexpression cluster: | C1023_seminal_ductus_thyroid_pituitary_throat_small_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.16e-31 | 3 |
ciliated epithelial cell | 8.16e-31 | 3 |
multi-ciliated epithelial cell | 8.16e-31 | 3 |
non-pigmented ciliary epithelial cell | 8.16e-31 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.96e-31 | 3 |
internal male genitalia | 1.96e-31 | 3 |
ciliary epithelium | 8.16e-31 | 3 |
ciliary body | 8.16e-31 | 3 |
duct of male reproductive system | 9.38e-24 | 4 |
atypical epithelium | 2.73e-23 | 4 |
gland of diencephalon | 2.58e-22 | 4 |
neuroendocrine gland | 2.58e-22 | 4 |
throat | 5.20e-21 | 2 |
pituitary gland | 2.35e-20 | 2 |
vasculature of eye | 9.62e-16 | 6 |
uvea | 9.62e-16 | 6 |
vasculature of head | 9.62e-16 | 6 |
diencephalon | 4.99e-13 | 7 |
future diencephalon | 4.99e-13 | 7 |
vas deferens | 9.57e-12 | 1 |
spermatic cord | 9.57e-12 | 1 |
seminal vesicle | 1.06e-11 | 1 |
seminal fluid secreting gland | 1.06e-11 | 1 |
epididymis | 1.45e-11 | 1 |
tricuspid valve | 3.28e-11 | 1 |
right atrium valve | 3.28e-11 | 1 |
outflow tract of atrium | 3.28e-11 | 1 |
outflow part of right atrium | 3.28e-11 | 1 |
right cardiac atrium | 3.28e-11 | 1 |
thyroid gland | 4.15e-09 | 5 |
pharyngeal pouch | 4.15e-09 | 5 |
thyroid diverticulum | 4.15e-09 | 5 |
pharyngeal pouch 2 | 4.15e-09 | 5 |
thyroid primordium | 4.15e-09 | 5 |
male reproductive organ | 5.33e-09 | 11 |
pigment epithelium of eye | 7.78e-09 | 11 |
vasculature of organ | 7.78e-09 | 11 |
anterior segment of eyeball | 4.82e-07 | 14 |
endocrine gland | 5.97e-07 | 35 |