FFCP PHASE1:Hg19::chr12:97562625..97562630,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:97562625..97562630,+ | |||
|description=CAGE_peak_at_chr12:97562625..97562630,+ | |description=CAGE_peak_at_chr12:97562625..97562630,+ | ||
|id=chr12:97562625..97562630,+ | |id=chr12:97562625..97562630,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.88e-08!5;CL:0000133!6.68e-07!59 | |ontology_enrichment_celltype=CL:0002322!2.88e-08!5;CL:0000133!6.68e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.96e-20;5!CL:0000540;2.43e-10;6!CL:0000404;2.43e-10;6!CL:0002321;2.50e-10;15!CL:0000064;2.05e-09;3!CL:0000067;2.05e-09;3!CL:0005012;2.05e-09;3!CL:0002304;2.05e-09;3!CL:0002605;5.13e-09;3!CL:0002319;7.55e-08;25!CL:0000946;2.24e-07;1!CL:0000786;2.24e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.07e-20,5;CL:0000047,4.05e-13,8;CL:0000133,1.51e-10,59;CL:0000540,2.11e-10,6;CL:0000031,2.11e-10,6;CL:0000404,2.11e-10,6;CL:0000064,2.14e-09,3;CL:0000067,2.14e-09,3;CL:0005012,2.14e-09,3;CL:0002304,2.14e-09,3;CL:0002605,4.35e-09,3;CL:0000221,2.40e-08,72;CL:0002319,6.39e-08,25;CL:0000946,2.80e-07,1;CL:0000786,2.80e-07,1;CL:0000980,2.80e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.43e-10;6 | |||
|ontology_enrichment_disease=DOID:162!1.62e-21!235;DOID:14566!3.52e-21!239;DOID:0050686!3.46e-13!137;DOID:0050687!7.99e-13!143;DOID:305!8.11e-12!106;DOID:2531!1.65e-09!51;DOID:0060083!1.65e-09!51 | |ontology_enrichment_disease=DOID:162!1.62e-21!235;DOID:14566!3.52e-21!239;DOID:0050686!3.46e-13!137;DOID:0050687!7.99e-13!143;DOID:305!8.11e-12!106;DOID:2531!1.65e-09!51;DOID:0060083!1.65e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:4960;7.26e-08;1!DOID:0070004;7.26e-08;1!DOID:2355;1.11e-07;1!DOID:0050619;2.24e-07;1!DOID:1357;2.24e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,7.76e-08,1;DOID:0070004,7.76e-08,1;DOID:2355,1.15e-07,1;DOID:0050619,2.31e-07,1;DOID:1357,2.31e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.05e-09;3!UBERON:0001775;2.05e-09;3!UBERON:0001764;2.24e-07;1!UBERON:0001825;2.24e-07;1!UBERON:0000488;2.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.14e-09,3;UBERON:0001775,2.14e-09,3;UBERON:0001764,2.31e-07,1;UBERON:0001825,2.31e-07,1;UBERON:0000488,2.99e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.71741592278634,1.23186982565596,0.376627918784408,0.305653622991805,0.246301768349837,0.472264687882075,0,0,0,0,0,0.369754010166788,0.619737604642413,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6469748805939,2.21729397462564,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.06023814657188,0.929551542956147,2.69518743039963,2.01856680700503,2.18986415445498,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,1.52456774533478,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,9.18687011696269,0,0.245040215981032,0.185803175125719,0.144269212976445,0.213425530045242,0.637705090915289,0,0,0,0,0,0.228234679033192,0.626719583092093,0,0.169291777801603,0.642352300414798,1.21079824314629,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.63337622438398,0,0,0.251932747854276,0,0.246169610922139,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0.796554137998498,0,0.472775363535873,2.06846023944879,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0.75901493089674,2.70192184266644,0.421996129056054,0.979396848954886,0.565412285735763,0,0,0,0,0,0,0,0.134802265961354,0,0,0.364909578431332,0.586993856796269,0,0,0,0,0,0.450970258243478,0,0,0.330991955875499,0.313932918407225,0,0,0,0.867798691675654,0,0.435296032902013,0,0,0,0,0,0,0,0,0.685209623233754,0.794858446811959,0.316553979779393,0,1.28254112402454,0,0,0,0.80175617316141,6.17741992303072,0.14405479798815,0,0,0.67952103036807,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,2.54019996197353,0,0,4.1795818600905,2.75078873194468,6.64704540846696,0,0,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,3.61207091297091,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.974340787047167,0,0,0,0,0,1.25643277000187,0,0.122026264901963,0,0,0.110929051536852,0,0.415045904808692,0.124980407962107,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0.694567422971502,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,3.44429959321631,0,0,0,0,0.895260599125562,0.646948868380091,9.59322245320968,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0.818859587550484,0,0.0675375846183947,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0.91064876540519,0,1.15233987555779,0,0.0679697329768317,0,0.590969204419841,0.222462803784138,0,0,0.560544326627578,0,1.29556554731173,0,0,0,6.04455411914251,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0.467878926924211,0,0,0.45178432815584,0.109940516745429,0,0,0,1.41095188908457,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,3.65882632021729,2.84090487105608,0.253397002022874,0.203977659483963,0,0,0.250707539292375,0.151557396436479,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,8.40988969354601,0,0,0,0,0,0,0,0.488419611665847,0.213454691755431,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.71741592278634,1.23186982565596,0.376627918784408,0.305653622991805,0.246301768349837,0.472264687882075,0,0,0,0,0,0.369754010166788,0.619737604642413,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6469748805939,2.21729397462564,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.06023814657188,0.929551542956147,2.69518743039963,2.01856680700503,2.18986415445498,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,1.52456774533478,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,9.18687011696269,0,0.245040215981032,0.185803175125719,0.144269212976445,0.213425530045242,0.637705090915289,0,0,0,0,0,0.228234679033192,0.626719583092093,0,0.169291777801603,0.642352300414798,1.21079824314629,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.63337622438398,0,0,0.251932747854276,0,0.246169610922139,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0.796554137998498,0,0.472775363535873,2.06846023944879,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0.75901493089674,2.70192184266644,0.421996129056054,0.979396848954886,0.565412285735763,0,0,0,0,0,0,0,0.134802265961354,0,0,0.364909578431332,0.586993856796269,0,0,0,0,0,0.450970258243478,0,0,0.330991955875499,0.313932918407225,0,0,0,0.867798691675654,0,0.435296032902013,0,0,0,0,0,0,0,0,0.685209623233754,0.794858446811959,0.316553979779393,0,1.28254112402454,0,0,0,0.80175617316141,6.17741992303072,0.14405479798815,0,0,0.67952103036807,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,2.54019996197353,0,0,4.1795818600905,2.75078873194468,6.64704540846696,0,0,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0,0,3.61207091297091,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.974340787047167,0,0,0,0,0,1.25643277000187,0,0.122026264901963,0,0,0.110929051536852,0,0.415045904808692,0.124980407962107,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0.694567422971502,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,3.44429959321631,0,0,0,0,0.895260599125562,0.646948868380091,9.59322245320968,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0.818859587550484,0,0.0675375846183947,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0.91064876540519,0,1.15233987555779,0,0.0679697329768317,0,0.590969204419841,0.222462803784138,0,0,0.560544326627578,0,1.29556554731173,0,0,0,6.04455411914251,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0.467878926924211,0,0,0.45178432815584,0.109940516745429,0,0,0,1.41095188908457,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,3.65882632021729,2.84090487105608,0.253397002022874,0.203977659483963,0,0,0.250707539292375,0.151557396436479,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,8.40988969354601,0,0,0,0,0,0,0,0.488419611665847,0.213454691755431,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr12:97562625..97562630,+ | |short_description=p@chr12:97562625..97562630,+ | ||
}} | }} |
Latest revision as of 13:57, 24 July 2015
Short description: | p@chr12:97562625..97562630, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97562625..97562630, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.07e-20 | 5 |
neuronal stem cell | 4.05e-13 | 8 |
neurectodermal cell | 1.51e-10 | 59 |
neuron | 2.11e-10 | 6 |
neuroblast | 2.11e-10 | 6 |
electrically signaling cell | 2.11e-10 | 6 |
ciliated cell | 2.14e-09 | 3 |
ciliated epithelial cell | 2.14e-09 | 3 |
multi-ciliated epithelial cell | 2.14e-09 | 3 |
non-pigmented ciliary epithelial cell | 2.14e-09 | 3 |
astrocyte of the cerebral cortex | 4.35e-09 | 3 |
ectodermal cell | 2.40e-08 | 72 |
neural cell | 6.39e-08 | 25 |
antibody secreting cell | 2.80e-07 | 1 |
plasma cell | 2.80e-07 | 1 |
plasmablast | 2.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.14e-09 | 3 |
ciliary body | 2.14e-09 | 3 |
maxillary sinus | 2.31e-07 | 1 |
paranasal sinus | 2.31e-07 | 1 |
atypical epithelium | 2.99e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.76e-08 | 1 |
myeloma | 7.76e-08 | 1 |
anemia | 1.15e-07 | 1 |
paranasal sinus cancer | 2.31e-07 | 1 |
maxillary sinus cancer | 2.31e-07 | 1 |