FFCP PHASE1:Hg19::chr12:96603708..96603712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96603708..96603712,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:96603708..96603712,+ | |description=CAGE_peak_at_chr12:96603708..96603712,+ | ||
|id=chr12:96603708..96603712,+ | |id=chr12:96603708..96603712,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.83e-19!42;CL:0000860!6.33e-17!45;CL:0002087!4.24e-15!119;CL:0002031!9.37e-15!124;CL:0000738!3.18e-14!140;CL:0002194!4.30e-13!63;CL:0000576!4.30e-13!63;CL:0000040!4.30e-13!63;CL:0000559!4.30e-13!63;CL:0000766!9.74e-13!76;CL:0000839!1.26e-12!70;CL:0002009!2.18e-12!65;CL:0000557!2.65e-12!71;CL:0000988!1.40e-10!182;CL:0000037!2.91e-10!172;CL:0000566!2.91e-10!172;CL:0002032!3.26e-10!165;CL:0000837!3.26e-10!165;CL:0000763!5.22e-07!112;CL:0000049!5.22e-07!112 | |ontology_enrichment_celltype=CL:0002057!7.83e-19!42;CL:0000860!6.33e-17!45;CL:0002087!4.24e-15!119;CL:0002031!9.37e-15!124;CL:0000738!3.18e-14!140;CL:0002194!4.30e-13!63;CL:0000576!4.30e-13!63;CL:0000040!4.30e-13!63;CL:0000559!4.30e-13!63;CL:0000766!9.74e-13!76;CL:0000839!1.26e-12!70;CL:0002009!2.18e-12!65;CL:0000557!2.65e-12!71;CL:0000988!1.40e-10!182;CL:0000037!2.91e-10!172;CL:0000566!2.91e-10!172;CL:0002032!3.26e-10!165;CL:0000837!3.26e-10!165;CL:0000763!5.22e-07!112;CL:0000049!5.22e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-27;33!CL:0002057;4.35e-27;33!CL:0000473;1.07e-20;39!CL:0000234;1.07e-20;39!CL:0000576;1.02e-18;48!CL:0000766;3.25e-14;69!CL:0002393;3.57e-13;6!CL:0002397;3.57e-13;6!CL:0002087;1.59e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.14e-37,42;CL:0002057,6.14e-37,42;CL:0000473,5.03e-32,48;CL:0000234,5.03e-32,48;CL:0002194,3.86e-25,59;CL:0000576,3.86e-25,59;CL:0000040,3.86e-25,59;CL:0000559,3.86e-25,59;CL:0002009,2.99e-24,61;CL:0000839,2.92e-22,66;CL:0000557,6.74e-22,67;CL:0000766,3.13e-20,72;CL:0002087,5.52e-18,115;CL:0002031,4.05e-17,120;CL:0000738,9.04e-15,136;CL:0000763,9.78e-13,108;CL:0000049,9.78e-13,108;CL:0002032,5.01e-12,161;CL:0000837,5.01e-12,161;CL:0000037,2.11e-11,168;CL:0000988,1.13e-10,177;CL:0002393,4.56e-09,9;CL:0002397,4.56e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.13e-25;42!UBERON:0005425;6.03e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.54e-12!112;UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0001474!4.97e-10!86;UBERON:0002371!8.51e-10!80;UBERON:0002405!3.71e-09!115;UBERON:0004765!4.29e-07!101;UBERON:0001434!4.29e-07!101 | |ontology_enrichment_uberon=UBERON:0002193!7.54e-12!112;UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0001474!4.97e-10!86;UBERON:0002371!8.51e-10!80;UBERON:0002405!3.71e-09!115;UBERON:0004765!4.29e-07!101;UBERON:0001434!4.29e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.03e-10;1!UBERON:0001785;6.03e-10;1!UBERON:0002464;6.03e-10;1!UBERON:0004904;6.03e-10;1!UBERON:0001021;6.03e-10;1!UBERON:0002426;1.36e-09;1!UBERON:0003831;1.36e-09;1!UBERON:0003898;1.36e-09;1!UBERON:0004830;1.36e-09;1!UBERON:0003830;1.36e-09;1!UBERON:0005175;1.36e-09;1!UBERON:0001774;1.36e-09;1!UBERON:0001103;1.36e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.72e-19,76;UBERON:0001474,1.69e-17,82;UBERON:0004765,9.61e-16,90;UBERON:0002405,3.66e-15,93;UBERON:0002390,2.85e-14,98;UBERON:0003061,2.85e-14,98;UBERON:0001434,6.11e-14,100;UBERON:0002193,9.78e-13,108;UBERON:0000941,5.79e-10,1;UBERON:0001785,5.79e-10,1;UBERON:0002464,5.79e-10,1;UBERON:0004904,5.79e-10,1;UBERON:0001021,5.79e-10,1;UBERON:0003902,5.79e-10,1;UBERON:0005425,5.79e-10,1;UBERON:0002426,8.17e-10,1;UBERON:0003831,8.17e-10,1;UBERON:0003898,8.17e-10,1;UBERON:0004830,8.17e-10,1;UBERON:0003830,8.17e-10,1;UBERON:0005175,8.17e-10,1;UBERON:0001774,8.17e-10,1;UBERON:0001103,8.17e-10,1;UBERON:0010084,8.17e-10,1;UBERON:0002204,1.16e-08,167 | |||
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| ||
|short_description=p@chr12:96603708..96603712,+ | |short_description=p@chr12:96603708..96603712,+ | ||
}} | }} |
Latest revision as of 13:53, 24 July 2015
Short description: | p@chr12:96603708..96603712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96603708..96603712, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.14e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.14e-37 | 42 |
defensive cell | 5.03e-32 | 48 |
phagocyte | 5.03e-32 | 48 |
monopoietic cell | 3.86e-25 | 59 |
monocyte | 3.86e-25 | 59 |
monoblast | 3.86e-25 | 59 |
promonocyte | 3.86e-25 | 59 |
macrophage dendritic cell progenitor | 2.99e-24 | 61 |
myeloid lineage restricted progenitor cell | 2.92e-22 | 66 |
granulocyte monocyte progenitor cell | 6.74e-22 | 67 |
myeloid leukocyte | 3.13e-20 | 72 |
nongranular leukocyte | 5.52e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.05e-17 | 120 |
leukocyte | 9.04e-15 | 136 |
myeloid cell | 9.78e-13 | 108 |
common myeloid progenitor | 9.78e-13 | 108 |
hematopoietic oligopotent progenitor cell | 5.01e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.01e-12 | 161 |
hematopoietic stem cell | 2.11e-11 | 168 |
hematopoietic cell | 1.13e-10 | 177 |
intermediate monocyte | 4.56e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.56e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.72e-19 | 76 |
bone element | 1.69e-17 | 82 |
skeletal element | 9.61e-16 | 90 |
immune system | 3.66e-15 | 93 |
hematopoietic system | 2.85e-14 | 98 |
blood island | 2.85e-14 | 98 |
skeletal system | 6.11e-14 | 100 |
hemolymphoid system | 9.78e-13 | 108 |
cranial nerve II | 5.79e-10 | 1 |
cranial nerve | 5.79e-10 | 1 |
nerve trunk | 5.79e-10 | 1 |
nerve connecting eye with brain | 5.79e-10 | 1 |
nerve | 5.79e-10 | 1 |
retinal neural layer | 5.79e-10 | 1 |
presumptive neural retina | 5.79e-10 | 1 |
chest muscle | 8.17e-10 | 1 |
respiratory system muscle | 8.17e-10 | 1 |
skeletal muscle of trunk | 8.17e-10 | 1 |
respiratory system skeletal muscle | 8.17e-10 | 1 |
thoracic segment muscle | 8.17e-10 | 1 |
chest organ | 8.17e-10 | 1 |
muscle of trunk | 8.17e-10 | 1 |
diaphragm | 8.17e-10 | 1 |
future diaphragm | 8.17e-10 | 1 |
musculoskeletal system | 1.16e-08 | 167 |