FFCP PHASE1:Hg19::chr12:96589367..96589389,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96589367..96589389,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:96589367..96589389,- | |description=CAGE_peak_at_chr12:96589367..96589389,- | ||
|id=chr12:96589367..96589389,- | |id=chr12:96589367..96589389,- | ||
|ontology_enrichment_celltype=CL:0000738!1.34e-52!140;CL:0002057!3.63e-47!42;CL:0002031!1.03e-44!124;CL:0002087!1.60e-44!119;CL:0000860!3.33e-43!45;CL:0000988!1.09e-40!182;CL:0000037!4.25e-40!172;CL:0000566!4.25e-40!172;CL:0002032!5.28e-34!165;CL:0000837!5.28e-34!165;CL:0000557!1.78e-32!71;CL:0000766!1.02e-31!76;CL:0002009!4.73e-31!65;CL:0000839!1.50e-29!70;CL:0002194!1.02e-28!63;CL:0000576!1.02e-28!63;CL:0000040!1.02e-28!63;CL:0000559!1.02e-28!63;CL:0000763!1.27e-20!112;CL:0000049!1.27e-20!112;CL:0000134!7.03e-16!358;CL:0002320!3.90e-15!365;CL:0000219!4.41e-13!390;CL:0000838!9.72e-13!52;CL:0000542!2.27e-12!53;CL:0000051!2.27e-12!53;CL:0000048!5.60e-11!430;CL:0000624!1.34e-10!6;CL:0000080!1.44e-10!6;CL:0000723!1.62e-10!436;CL:0000034!1.69e-10!444;CL:0000084!1.60e-07!25;CL:0000827!1.60e-07!25;CL:0000623!6.54e-07!3;CL:0000825!6.54e-07!3;CL:0000791!8.89e-07!18;CL:0000789!8.89e-07!18;CL:0002420!8.89e-07!18;CL:0002419!8.89e-07!18;CL:0000790!8.89e-07!18;CL:0000767!9.69e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.34e-52!140;CL:0002057!3.63e-47!42;CL:0002031!1.03e-44!124;CL:0002087!1.60e-44!119;CL:0000860!3.33e-43!45;CL:0000988!1.09e-40!182;CL:0000037!4.25e-40!172;CL:0000566!4.25e-40!172;CL:0002032!5.28e-34!165;CL:0000837!5.28e-34!165;CL:0000557!1.78e-32!71;CL:0000766!1.02e-31!76;CL:0002009!4.73e-31!65;CL:0000839!1.50e-29!70;CL:0002194!1.02e-28!63;CL:0000576!1.02e-28!63;CL:0000040!1.02e-28!63;CL:0000559!1.02e-28!63;CL:0000763!1.27e-20!112;CL:0000049!1.27e-20!112;CL:0000134!7.03e-16!358;CL:0002320!3.90e-15!365;CL:0000219!4.41e-13!390;CL:0000838!9.72e-13!52;CL:0000542!2.27e-12!53;CL:0000051!2.27e-12!53;CL:0000048!5.60e-11!430;CL:0000624!1.34e-10!6;CL:0000080!1.44e-10!6;CL:0000723!1.62e-10!436;CL:0000034!1.69e-10!444;CL:0000084!1.60e-07!25;CL:0000827!1.60e-07!25;CL:0000623!6.54e-07!3;CL:0000825!6.54e-07!3;CL:0000791!8.89e-07!18;CL:0000789!8.89e-07!18;CL:0002420!8.89e-07!18;CL:0002419!8.89e-07!18;CL:0000790!8.89e-07!18;CL:0000767!9.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-73;33!CL:0002057;1.58e-73;33!CL:0000473;4.45e-49;39!CL:0000234;4.45e-49;39!CL:0000576;2.20e-40;48!CL:0000766;1.91e-25;69!CL:0002087;6.64e-22;104!CL:0000738;5.42e-14;136!CL:0000623;1.59e-11;3!CL:0000767;3.65e-11;3!CL:0000763;7.89e-11;100!CL:0000226;1.04e-10;3!CL:0000842;1.04e-10;3!CL:0000784;2.81e-10;3!CL:0000988;3.22e-09;177!CL:0000624;4.01e-09;6!CL:0000791;2.40e-08;18!CL:0000789;2.40e-08;18!CL:0002419;2.40e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.22e-75,42;CL:0002057,2.22e-75,42;CL:0000473,6.92e-65,48;CL:0000234,6.92e-65,48;CL:0000738,6.95e-64,136;CL:0002087,1.49e-62,115;CL:0002194,1.23e-53,59;CL:0000576,1.23e-53,59;CL:0000040,1.23e-53,59;CL:0000559,1.23e-53,59;CL:0000766,8.78e-52,72;CL:0002009,1.27e-51,61;CL:0002031,1.37e-51,120;CL:0000037,1.59e-49,168;CL:0000988,2.29e-48,177;CL:0000839,4.05e-47,66;CL:0000557,2.68e-46,67;CL:0002032,1.22e-41,161;CL:0000837,1.22e-41,161;CL:0000763,1.34e-31,108;CL:0000049,1.34e-31,108;CL:0000134,3.47e-18,354;CL:0002320,1.34e-17,361;CL:0000219,1.60e-15,386;CL:0000034,5.22e-13,441;CL:0000048,5.50e-13,427;CL:0000723,1.23e-12,433;CL:0000623,1.71e-11,3;CL:0000825,1.71e-11,3;CL:0000767,3.53e-11,3;CL:0000226,9.12e-11,3;CL:0000842,9.12e-11,3;CL:0000784,3.42e-10,3;CL:0000838,1.54e-09,52;CL:0000542,2.68e-09,53;CL:0000051,2.68e-09,53;CL:0000624,4.01e-09,6;CL:0000791,2.41e-08,18;CL:0000789,2.41e-08,18;CL:0002420,2.41e-08,18;CL:0002419,2.41e-08,18;CL:0000790,2.41e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.43e-55;42!CL:0000049;3.97e-09;108!CL:0000790;2.40e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.05e-34!102;UBERON:0003061!8.05e-34!102;UBERON:0002193!2.25e-29!112;UBERON:0002371!5.73e-29!80;UBERON:0001474!4.90e-26!86;UBERON:0002405!2.23e-20!115;UBERON:0004765!2.89e-20!101;UBERON:0001434!2.89e-20!101;UBERON:0002384!1.01e-14!375;UBERON:0003081!2.16e-12!216;UBERON:0002204!2.07e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.33e-40,98;UBERON:0003061,4.33e-40,98;UBERON:0002371,7.20e-40,76;UBERON:0001474,2.33e-36,82;UBERON:0002193,1.59e-35,108;UBERON:0002405,2.97e-33,93;UBERON:0004765,2.10e-32,90;UBERON:0001434,2.41e-28,100;UBERON:0002384,8.55e-17,371;UBERON:0003081,1.34e-15,203;UBERON:0002204,1.04e-13,167;UBERON:0000926,7.28e-07,315;UBERON:0004120,7.28e-07,315;UBERON:0006603,7.28e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,11.4075640286182,9.97956435052753,11.1467608787575,0,0,0,0,0.142169232487422,0.587200878669695,81.437325054186,85.2313901748102,51.6485872303727,0,0,0,1.74477886535478,1.51150377475524,1.4555043671269,1.85943229524548,2.87817521615278,5.26500830521676,4.60307827715441,5.89169625016932,8.27687804610048,66.5359163821674,60.6755602568797,51.4620649058499,2.44715041405386,2.72906150057846,3.59557575112135,105.29285897559,81.8369019044039,95.2612317440571,0.659702600373432,1.19678194572979,2.55734850319616,22.346111374401,12.4824749432051,15.5705562248894,1.50749199154046,4.17186334736161,4.77815458351257,6.65939452896706,21.7283805232663,18.6712808590122,0,0.212604299965044,0,0.22465726229299,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,4.55370375287559,5.87237189370939,3.44045905312706,0,7.8471198817415,0,4.52432471261816,11.3973121197258,4.93443597598822,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0,3.06576394881537,2.40539211837841,1.01207876807801,0,0,0,0,0,0,0,0,10.2819439044614,12.5696892018248,9.41358625238193,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,4.5313218618015,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2159071325195,21.3471299110922,17.326309897766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,9.49142483601914,12.5938518208064,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.617819694732514,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.395223263795889,0,0,1.08803560673895,0.7520696820681,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,11.4075640286182,9.97956435052753,11.1467608787575,0,0,0,0,0.142169232487422,0.587200878669695,81.437325054186,85.2313901748102,51.6485872303727,0,0,0,1.74477886535478,1.51150377475524,1.4555043671269,1.85943229524548,2.87817521615278,5.26500830521676,4.60307827715441,5.89169625016932,8.27687804610048,66.5359163821674,60.6755602568797,51.4620649058499,2.44715041405386,2.72906150057846,3.59557575112135,105.29285897559,81.8369019044039,95.2612317440571,0.659702600373432,1.19678194572979,2.55734850319616,22.346111374401,12.4824749432051,15.5705562248894,1.50749199154046,4.17186334736161,4.77815458351257,6.65939452896706,21.7283805232663,18.6712808590122,0,0.212604299965044,0,0.22465726229299,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,4.55370375287559,5.87237189370939,3.44045905312706,0,7.8471198817415,0,4.52432471261816,11.3973121197258,4.93443597598822,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0,3.06576394881537,2.40539211837841,1.01207876807801,0,0,0,0,0,0,0,0,10.2819439044614,12.5696892018248,9.41358625238193,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,4.5313218618015,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2159071325195,21.3471299110922,17.326309897766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,9.49142483601914,12.5938518208064,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.617819694732514,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.395223263795889,0,0,1.08803560673895,0.7520696820681,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:96589367..96589389,- | |short_description=p@chr12:96589367..96589389,- | ||
}} | }} |
Latest revision as of 13:52, 24 July 2015
Short description: | p@chr12:96589367..96589389, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96589367..96589389, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.33e-40 | 98 |
blood island | 4.33e-40 | 98 |
bone marrow | 7.20e-40 | 76 |
bone element | 2.33e-36 | 82 |
hemolymphoid system | 1.59e-35 | 108 |
immune system | 2.97e-33 | 93 |
skeletal element | 2.10e-32 | 90 |
skeletal system | 2.41e-28 | 100 |
connective tissue | 8.55e-17 | 371 |
lateral plate mesoderm | 1.34e-15 | 203 |
musculoskeletal system | 1.04e-13 | 167 |
mesoderm | 7.28e-07 | 315 |
mesoderm-derived structure | 7.28e-07 | 315 |
presumptive mesoderm | 7.28e-07 | 315 |