FFCP PHASE1:Hg19::chr12:9262000..9262009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9262000..9262009,- | |||
|coexpression_cluster_id=C1182 | |||
|description=CAGE_peak_at_chr12:9262000..9262009,- | |description=CAGE_peak_at_chr12:9262000..9262009,- | ||
|id=chr12:9262000..9262009,- | |id=chr12:9262000..9262009,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.01e-13;12!CL:0000235;4.18e-12;6!CL:0002567;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.40e-13,12;CL:0000235,5.37e-12,6;CL:0002567,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.94e-24;11!UBERON:0009497;1.35e-20;13!UBERON:0001045;8.01e-18;1!UBERON:0001041;8.42e-14;30!UBERON:0003104;4.04e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-33!115;UBERON:0001896!5.95e-07!3;UBERON:0005290!5.95e-07!3;UBERON:0010096!5.95e-07!3;UBERON:0002368!7.01e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.71e-22;19!UBERON:0006925;7.71e-22;19!UBERON:0001154;8.01e-18;1!UBERON:0001153;8.01e-18;1!UBERON:0002171;8.01e-18;1!UBERON:0009854;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0002423;1.24e-16;25!UBERON:0002365;1.81e-12;31!UBERON:0002330;1.81e-12;31!UBERON:0002368;3.61e-11;33!UBERON:0000949;6.05e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.24e-25,23;UBERON:0009856,1.14e-22,26;UBERON:0002107,7.40e-22,19;UBERON:0006925,7.40e-22,19;UBERON:0008836,7.40e-22,19;UBERON:0008835,6.72e-19,22;UBERON:0003894,6.72e-19,22;UBERON:0002171,4.44e-18,1;UBERON:0006518,4.44e-18,1;UBERON:0008949,4.44e-18,1;UBERON:0000101,4.44e-18,1;UBERON:0002167,4.44e-18,1;UBERON:0001154,1.44e-17,1;UBERON:0001153,1.44e-17,1;UBERON:0001045,1.44e-17,1;UBERON:0007499,1.20e-16,25;UBERON:0009497,1.20e-16,25;UBERON:0000015,1.20e-16,25;UBERON:0002423,1.20e-16,25;UBERON:0006235,1.20e-16,25;UBERON:0004161,1.20e-16,25;UBERON:0002365,1.92e-13,31;UBERON:0002330,1.92e-13,31;UBERON:0002368,6.47e-12,35;UBERON:0000949,2.83e-09,45;UBERON:0003929,9.99e-08,54;UBERON:0005172,9.99e-08,54;UBERON:0005173,9.99e-08,54;UBERON:0005911,4.28e-07,82;UBERON:0002530,4.54e-07,59;UBERON:0002417,5.97e-07,60;UBERON:0000916,5.97e-07,60 | |||
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| ||
|short_description=p@chr12:9262000..9262009,- | |short_description=p@chr12:9262000..9262009,- | ||
}} | }} |
Latest revision as of 13:34, 24 July 2015
Short description: | p@chr12:9262000..9262009, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9262000..9262009, - |
Coexpression cluster: | C1182_Hepatocyte_lung_liver_Monocytederived_hepatocellular_heart_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.40e-13 | 12 |
macrophage | 5.37e-12 | 6 |
light melanocyte | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.24e-25 | 23 |
sac | 1.14e-22 | 26 |
liver | 7.40e-22 | 19 |
digestive gland | 7.40e-22 | 19 |
liver bud | 7.40e-22 | 19 |
hepatic diverticulum | 6.72e-19 | 22 |
liver primordium | 6.72e-19 | 22 |
lower lobe of right lung | 4.44e-18 | 1 |
right lung lobe | 4.44e-18 | 1 |
lower lobe of lung | 4.44e-18 | 1 |
lobe of lung | 4.44e-18 | 1 |
right lung | 4.44e-18 | 1 |
vermiform appendix | 1.44e-17 | 1 |
caecum | 1.44e-17 | 1 |
midgut | 1.44e-17 | 1 |
epithelial sac | 1.20e-16 | 25 |
epithelium of foregut-midgut junction | 1.20e-16 | 25 |
anatomical boundary | 1.20e-16 | 25 |
hepatobiliary system | 1.20e-16 | 25 |
foregut-midgut junction | 1.20e-16 | 25 |
septum transversum | 1.20e-16 | 25 |
exocrine gland | 1.92e-13 | 31 |
exocrine system | 1.92e-13 | 31 |
endocrine gland | 6.47e-12 | 35 |
endocrine system | 2.83e-09 | 45 |
gut epithelium | 9.99e-08 | 54 |
abdomen element | 9.99e-08 | 54 |
abdominal segment element | 9.99e-08 | 54 |
endo-epithelium | 4.28e-07 | 82 |
gland | 4.54e-07 | 59 |
abdominal segment of trunk | 5.97e-07 | 60 |
abdomen | 5.97e-07 | 60 |