FFCP PHASE1:Hg19::chr12:88813035..88813063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:88813035..88813063,- | |||
|coexpression_cluster_id=C2247 | |||
|description=CAGE_peak_at_chr12:88813035..88813063,- | |description=CAGE_peak_at_chr12:88813035..88813063,- | ||
|id=chr12:88813035..88813063,- | |id=chr12:88813035..88813063,- | ||
|ontology_enrichment_celltype=CL:0000055!7.15e-39!180;CL:0000057!2.81e-28!75;CL:0000187!1.96e-22!54;CL:0000680!6.16e-22!57;CL:0000056!6.16e-22!57;CL:0000355!6.16e-22!57;CL:0000183!2.18e-20!59;CL:0000393!3.72e-18!60;CL:0000211!3.72e-18!60;CL:0002620!4.10e-17!23;CL:0000192!6.61e-17!42;CL:0000514!6.61e-17!42;CL:0000048!1.37e-16!430;CL:0000723!1.64e-15!436;CL:0000034!6.36e-15!444;CL:0000359!1.08e-14!32;CL:0000222!4.19e-09!119;CL:0002539!2.06e-07!10;CL:0002494!2.60e-07!16;CL:0002570!6.32e-07!8;CL:0002371!7.06e-07!591 | |ontology_enrichment_celltype=CL:0000055!7.15e-39!180;CL:0000057!2.81e-28!75;CL:0000187!1.96e-22!54;CL:0000680!6.16e-22!57;CL:0000056!6.16e-22!57;CL:0000355!6.16e-22!57;CL:0000183!2.18e-20!59;CL:0000393!3.72e-18!60;CL:0000211!3.72e-18!60;CL:0002620!4.10e-17!23;CL:0000192!6.61e-17!42;CL:0000514!6.61e-17!42;CL:0000048!1.37e-16!430;CL:0000723!1.64e-15!436;CL:0000034!6.36e-15!444;CL:0000359!1.08e-14!32;CL:0000222!4.19e-09!119;CL:0002539!2.06e-07!10;CL:0002494!2.60e-07!16;CL:0002570!6.32e-07!8;CL:0002371!7.06e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.92e-23;23!CL:0000359;2.92e-17;32!CL:0000187;8.08e-14;55!CL:0000192;9.20e-13;43!CL:0000057;1.27e-12;73!CL:0000393;4.75e-11;61!CL:0000211;4.75e-11;61!CL:0002494;9.76e-10;16!CL:0002539;1.54e-09;10!CL:0002570;9.05e-09;8!CL:0000188;9.59e-08;9!CL:0002551;9.92e-08;6!CL:0000723;1.82e-07;61!CL:0002320;7.10e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.00e-31,76;CL:0000187,3.79e-25,55;CL:0000680,4.76e-23,58;CL:0000056,4.76e-23,58;CL:0000355,4.76e-23,58;CL:0002620,5.74e-23,23;CL:0000393,3.61e-21,61;CL:0000211,3.61e-21,61;CL:0000048,9.61e-20,427;CL:0000723,7.34e-19,433;CL:0000034,3.37e-18,441;CL:0000359,7.80e-18,32;CL:0000192,1.11e-17,43;CL:0000514,1.11e-17,43;CL:0000222,6.29e-11,121;CL:0002494,1.38e-09,16;CL:0002539,1.66e-09,10;CL:0002570,7.57e-09,8;CL:0000188,9.14e-08,9;CL:0002551,1.03e-07,6;CL:0002320,6.72e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;9.20e-13;43!CL:0000355;1.19e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.36e-08;14!DOID:17;5.17e-07;5!DOID:450;5.17e-07;5!DOID:66;5.17e-07;5!DOID:423;5.17e-07;5!DOID:0080000;5.17e-07;5!DOID:11722;5.17e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.17e-08,14;DOID:17,5.22e-07,5;DOID:450,5.22e-07,5;DOID:66,5.22e-07,5;DOID:423,5.22e-07,5;DOID:0080000,5.22e-07,5;DOID:11722,5.22e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.48e-27!83;UBERON:0002329!1.48e-27!83;UBERON:0003077!1.48e-27!83;UBERON:0003059!1.48e-27!83;UBERON:0007282!1.48e-27!83;UBERON:0009618!1.48e-27!83;UBERON:0007285!1.48e-27!83;UBERON:0004290!1.34e-25!70;UBERON:0000486!2.09e-20!82;UBERON:0002385!3.67e-20!63;UBERON:0001015!3.67e-20!63;UBERON:0000383!3.67e-20!63;UBERON:0001134!7.82e-20!61;UBERON:0002036!7.82e-20!61;UBERON:0003082!7.82e-20!61;UBERON:0004535!3.56e-15!110;UBERON:0002199!6.86e-15!45;UBERON:0002416!6.86e-15!45;UBERON:0001009!1.24e-14!113;UBERON:0002097!3.12e-13!40;UBERON:0003102!1.11e-11!95;UBERON:0005256!3.48e-11!143;UBERON:0001637!3.93e-11!42;UBERON:0003509!3.93e-11!42;UBERON:0004572!3.93e-11!42;UBERON:0004573!6.07e-11!33;UBERON:0004571!6.07e-11!33;UBERON:0004872!3.04e-09!84;UBERON:0002204!9.93e-09!167;UBERON:0002049!1.86e-08!79;UBERON:0007798!1.86e-08!79;UBERON:0001135!4.82e-08!15;UBERON:0002067!1.44e-07!9;UBERON:0004016!1.44e-07!9;UBERON:0010083!1.44e-07!9;UBERON:0004237!2.06e-07!10;UBERON:0004695!2.06e-07!10;UBERON:0002111!2.06e-07!10;UBERON:0004178!2.06e-07!10;UBERON:0000475!3.10e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.60e-14;41!UBERON:0002199;1.15e-13;46!UBERON:0002416;1.15e-13;46!UBERON:0004573;2.07e-13;33!UBERON:0004571;2.07e-13;33!UBERON:0003102;1.86e-11;50!UBERON:0001637;6.41e-10;42!UBERON:0003509;6.41e-10;42!UBERON:0004572;6.41e-10;42!UBERON:0002067;1.22e-09;9!UBERON:0004237;1.54e-09;10!UBERON:0004695;1.54e-09;10!UBERON:0002111;1.54e-09;10!UBERON:0004178;1.54e-09;10!UBERON:0000947;4.47e-08;21!UBERON:0010191;4.47e-08;21!UBERON:0002385;7.27e-08;31!UBERON:0001015;7.27e-08;31!UBERON:0000383;7.27e-08;31!UBERON:0002204;5.50e-07;70!UBERON:0000948;5.65e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.86e-28,71;UBERON:0003059,6.86e-28,71;UBERON:0007282,6.86e-28,71;UBERON:0004290,6.86e-28,71;UBERON:0009618,6.86e-28,71;UBERON:0003077,3.06e-27,72;UBERON:0007285,3.06e-27,72;UBERON:0007524,1.30e-26,73;UBERON:0007503,1.01e-23,78;UBERON:0000486,1.29e-23,83;UBERON:0002199,6.86e-22,46;UBERON:0002416,6.86e-22,46;UBERON:0001134,1.38e-20,62;UBERON:0002036,1.38e-20,62;UBERON:0003082,1.38e-20,62;UBERON:0002385,1.77e-19,64;UBERON:0001015,1.77e-19,64;UBERON:0000383,1.77e-19,64;UBERON:0002097,2.04e-19,41;UBERON:0004535,4.08e-15,109;UBERON:0001637,9.85e-15,42;UBERON:0003509,9.85e-15,42;UBERON:0004572,9.85e-15,42;UBERON:0004573,1.04e-14,33;UBERON:0004571,1.04e-14,33;UBERON:0001009,3.00e-14,112;UBERON:0003102,5.60e-14,99;UBERON:0005256,2.95e-12,122;UBERON:0004872,3.66e-12,83;UBERON:0000926,3.85e-12,315;UBERON:0004120,3.85e-12,315;UBERON:0006603,3.85e-12,315;UBERON:0002067,1.03e-09,9;UBERON:0004016,1.03e-09,9;UBERON:0010083,1.03e-09,9;UBERON:0004237,1.66e-09,10;UBERON:0004695,1.66e-09,10;UBERON:0002111,1.66e-09,10;UBERON:0004178,1.66e-09,10;UBERON:0000490,6.50e-09,148;UBERON:0007500,1.55e-08,59;UBERON:0001981,1.55e-08,59;UBERON:0004537,1.55e-08,59;UBERON:0006965,1.55e-08,59;UBERON:0002204,1.63e-08,167;UBERON:0003104,3.53e-08,160;UBERON:0009142,3.53e-08,160;UBERON:0000947,4.36e-08,21;UBERON:0010191,4.36e-08,21;UBERON:0000948,5.76e-08,24;UBERON:0005498,5.76e-08,24;UBERON:0004140,5.76e-08,24;UBERON:0009881,5.76e-08,24;UBERON:0004141,5.76e-08,24;UBERON:0003084,5.76e-08,24;UBERON:0007005,5.76e-08,24;UBERON:0004139,5.76e-08,24;UBERON:0004291,5.76e-08,24;UBERON:0002049,1.44e-07,78;UBERON:0007798,1.44e-07,78;UBERON:0000055,2.34e-07,68;UBERON:0002384,7.16e-07,371 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,0,0,0.872338524100369,2.53299878168311,20.2150359496586,0,0.245733936501509,0,0,0,1.8564952944007,1.32558950291166,12.7741777825837,11.4511960324556,11.684961446198,13.1741855673437,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0.689491361473237,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.15076305659177,2.89151321907653,0.50133791063589,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,5.16140757063675,0,0,0,0,0,0,0.71153252537342,1.67360306382335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.77282716330412,30.9837483102932,9.17877186396204,4.61068896857864,1.12135520028461,1.06748995729705,2.22000793575444,5.60179863719579,9.42974704487816,1.30769522490767,0.454072282934794,0.576175924479999,7.49828581868149,44.0145708330752,29.6645347203114,38.2588622212611,12.8003603521704,11.1692331614011,14.1855314769271,44.3014551623118,2.94802361548243,22.2150429527896,1.18800285728205,4.45080472701402,0.910161361938026,1.43723628363248,5.21841953257605,3.75355559615892,44.3302584774693,0.877955241761676,2.14541457059314,3.45547535485173,1.70148274740032,16.1450672119976,18.7930502160339,72.056846394251,23.7071965906678,41.8393268708062,19.8383215835134,21.4034384781328,35.6118061029072,15.4924838206306,49.9818873003347,53.6650909084605,9.86040946594752,40.1160839543774,33.3489445133489,20.0081498926375,0,0,0,0,0,0,0,0,0,14.0804579096834,1.92972281457866,5.52539685409922,26.9333398258548,33.9283356384705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.977424915930974,2.07986957055916,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0.50496973370552,0.190493682876507,0,0,3.4214489204541,0.102827492703324,0,0,2.24262168690721,0.87192013766656,9.2406240134397,1.55126058909333,7.15312891703765,30.430899092016,0,0,2.31486636835928,0,5.06202140130589,0.428933980974443,0,0,55.7008875142287,0,0,12.359014459443,1.74306691720059,1.09970290300263,0,0,0,0.718874566474748,0,0,0.579125226670317,0.410952645100767,0,0.672510863961164,0.197030760201927,0,0,0,1.30139853857622,0,0,0,0,0,2.07207756718018,0.736148950314839,3.00102312635806,2.98391526069709,1.87173775377726,1.24900292158013,2.20783381047509,2.10854546986884,0,0,4.1389228517002,0.664225598535437,0.368738337083406,49.263009403403,0.391602314925481,0.343143423810856,0.206768026122887,0.431428401637234,0.213455115606889,0,0,1.5119514666484,0.496215615637554,0,1.12264037773229,0.896974044789907,0.511707249066704,0,0,16.1920178492788,11.7190738706664,14.2901251464028,15.058378446325,6.50778119375772,0.120859449591622,0,0,1.49258782613989,2.36718518408732,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,2.57602529119306,0,0,0.574265537996172,1.30012049207304,3.21367859688319,8.02366961824612,20.0263202249038,12.4337976528165,21.3646687351022,54.1398034136099,22.6226042506196,29.573639713387,1.69160867728801,0,0,0,0,3.71876439437829,5.66662224295152,2.0911118104818,15.7097125889805,10.6461206063404,6.08953094452551,2.03856641014312,7.15624433709956,2.60510858551767,12.9715564134678,7.43457756302917,1.79128453917934,0,3.81843897511124,5.49464048139461,1.79872457583315,0.274537029736055,0.942499218765491,9.30039415237254,0,8.8464275810186,0,58.247524021877,1.05650146756755,0.272999822815972,3.95935209470396,10.1707304958219,2.2054613741845,11.941901554342,10.9612721313441,4.05142873986681,3.27947376023316,2.02910376962704,1.239293992399,0.281695602532241,0.573645408816206,0,2.1400263088875,9.22378766583554,4.01104507065562,22.7213476142332,1.13841952129715,0.349934720244983,0,0,0,1.03558180854457,0,0,0,0,17.2532187138938,10.7049208999933,5.69647187174163,8.09988036556483,6.17043409629291,10.3755729790835,15.1208802426672,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,9.10203913121351,0.780103689942349,0,0,0,0,0,0.140669416410513,28.9402633059555,0,0,0.19924798825107,0,0,0,0,41.990344334344,0,0,0,0.295930216910801,9.57932369387759,28.8956174376056,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97341447450947,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.07240832367007,0,0,0,0,0,0,0,0,0.872901148395775,0,0,0,7.55115524471361,0.569797163602908,0,0.64127056201227,0.85381197895741,0,0,0,0,0,0.372757606696298,0,0,0,0,3.17845648891671,0,0,0,0,0,0,0,2.15361907373044,0,0,0.446342914883745,0,3.6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| ||
|short_description=p@chr12:88813035..88813063,- | |short_description=p@chr12:88813035..88813063,- | ||
}} | }} |
Latest revision as of 13:12, 24 July 2015
Short description: | p@chr12:88813035..88813063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88813035..88813063, - |
Coexpression cluster: | C2247_liposarcoma_Fibroblast_Smooth_Skeletal_Mesenchymal_Pancreatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.00e-31 | 76 |
muscle cell | 3.79e-25 | 55 |
muscle precursor cell | 4.76e-23 | 58 |
myoblast | 4.76e-23 | 58 |
multi-potent skeletal muscle stem cell | 4.76e-23 | 58 |
skin fibroblast | 5.74e-23 | 23 |
electrically responsive cell | 3.61e-21 | 61 |
electrically active cell | 3.61e-21 | 61 |
multi fate stem cell | 9.61e-20 | 427 |
somatic stem cell | 7.34e-19 | 433 |
stem cell | 3.37e-18 | 441 |
vascular associated smooth muscle cell | 7.80e-18 | 32 |
smooth muscle cell | 1.11e-17 | 43 |
smooth muscle myoblast | 1.11e-17 | 43 |
mesodermal cell | 6.29e-11 | 121 |
cardiocyte | 1.38e-09 | 16 |
aortic smooth muscle cell | 1.66e-09 | 10 |
mesenchymal stem cell of adipose | 7.57e-09 | 8 |
cell of skeletal muscle | 9.14e-08 | 9 |
fibroblast of dermis | 1.03e-07 | 6 |
connective tissue cell | 6.72e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.17e-08 | 14 |
musculoskeletal system disease | 5.22e-07 | 5 |
myotonic disease | 5.22e-07 | 5 |
muscle tissue disease | 5.22e-07 | 5 |
myopathy | 5.22e-07 | 5 |
muscular disease | 5.22e-07 | 5 |
myotonic dystrophy | 5.22e-07 | 5 |