FFCP PHASE1:Hg19::chr12:8798958..8798980,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:8798958..8798980,-
|short_description=p@chr12:8798958..8798980,-
|description=CAGE_peak_at_chr12:8798958..8798980,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:8798958..8798980,- | |||
|coexpression_cluster_id=C628 | |||
|description=CAGE_peak_at_chr12:8798958..8798980,- | |||
|id=chr12:8798958..8798980,- | |||
|ontology_enrichment_celltype=CL:0000136!2.56e-11!15;CL:0002334!4.29e-10!12;CL:0000057!1.84e-09!75;CL:0002620!2.19e-07!23;CL:0002595!5.60e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.75e-16;12!CL:0000136;2.85e-15;13!CL:1000306;7.97e-13;4!CL:0002547;7.97e-13;4!CL:0002615;3.75e-11;3!CL:0000135;4.81e-11;3!CL:0000388;4.81e-11;3!CL:0002580;5.77e-11;3!CL:0002579;7.50e-11;3!CL:0002595;9.05e-10;5!CL:0002617;9.88e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.44e-20,15;CL:0002334,2.20e-16,12;CL:0000057,6.80e-15,76;CL:1000306,9.20e-13,4;CL:0002547,9.20e-13,4;CL:0002615,3.89e-11,3;CL:0000135,4.75e-11,3;CL:0000388,4.75e-11,3;CL:0002580,5.60e-11,3;CL:0002579,8.85e-11,3;CL:0002595,8.65e-10,5;CL:0002617,8.97e-08,2;CL:0000048,5.37e-07,427;CL:0000134,7.05e-07,354;CL:0000723,9.55e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.55e-09!6;UBERON:0002358!2.55e-09!6;UBERON:0003684!2.55e-09!6;UBERON:0001178!2.55e-09!6;UBERON:0005631!3.32e-09!14;UBERON:0000158!3.32e-09!14;UBERON:0003124!1.20e-08!7;UBERON:0001737!1.30e-08!9;UBERON:0004923!6.86e-08!57;UBERON:0004457!3.79e-07!12;UBERON:0000042!3.79e-07!12;UBERON:0003834!5.60e-07!5;UBERON:0001533!5.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.68e-23;9!UBERON:0000042;2.68e-23;9!UBERON:0003688;2.85e-20;6!UBERON:0002358;2.85e-20;6!UBERON:0003684;2.85e-20;6!UBERON:0001178;2.85e-20;6!UBERON:0004797;7.97e-13;4!UBERON:0000415;7.97e-13;4!UBERON:0007240;7.97e-13;4!UBERON:0005742;7.97e-13;4!UBERON:0005734;7.97e-13;4!UBERON:0004664;7.97e-13;4!UBERON:0004663;7.97e-13;4!UBERON:0007846;4.81e-11;3!UBERON:0000043;4.81e-11;3!UBERON:0007845;4.81e-11;3!UBERON:0001443;1.89e-10;11!UBERON:0001013;4.69e-10;14!UBERON:0003834;9.05e-10;5!UBERON:0001533;9.05e-10;5!UBERON:0000310;2.72e-08;10!UBERON:0005406;1.75e-07;2!UBERON:0005090;4.74e-07;2!UBERON:0001630;4.74e-07;2!UBERON:0003513;5.42e-07;7!UBERON:0004573;7.87e-07;33!UBERON:0004571;7.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.48e-20,6;UBERON:0002358,3.48e-20,6;UBERON:0003684,3.48e-20,6;UBERON:0001178,3.48e-20,6;UBERON:0004457,4.69e-17,12;UBERON:0000042,4.69e-17,12;UBERON:0000415,9.20e-13,4;UBERON:0007240,9.20e-13,4;UBERON:0005742,9.20e-13,4;UBERON:0005734,9.20e-13,4;UBERON:0004664,9.20e-13,4;UBERON:0004663,9.20e-13,4;UBERON:0007846,4.75e-11,3;UBERON:0000043,4.75e-11,3;UBERON:0007845,4.75e-11,3;UBERON:0001443,1.72e-10,11;UBERON:0004923,4.13e-10,66;UBERON:0001013,5.72e-10,14;UBERON:0003834,8.65e-10,5;UBERON:0001533,8.65e-10,5;UBERON:0000310,2.56e-08,10;UBERON:0002384,7.58e-08,371;UBERON:0005406,1.56e-07,2;UBERON:0004573,1.90e-07,33;UBERON:0004571,1.90e-07,33;UBERON:0004797,2.64e-07,7;UBERON:0005090,4.32e-07,2;UBERON:0001630,4.32e-07,2;UBERON:0003513,5.25e-07,7 | |||
|phase1_expression=4.90531624030503,4.71021152560163,4.36958652697511,15.0109947529696,7.15137751083661,15.7020934338066,2.53299878168311,0,1.04474251279935,0,0,0.436882744260345,0,0,0,0.672325146451775,2.41077811209591,0.730310090387373,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,2.02608818663328,1.72131935057184,10.6129549677061,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,5.56107870635472,2.34913127700424,2.11931901159562,0.600182192168805,0,2.83404594050192,1.48893485065272,0.337552664482532,0.876933046450788,2.01947019395292,0.184099797284599,0.323292113637624,4.26011511019937,0.201504196455281,0.339121184620975,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,1.18009283054671,0.241011029883482,0.330881918197182,0.871517776369625,0.237270619111097,0.943819157121151,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.69954085009497,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0.606255142892519,3.32870879020994,0.907170879989041,6.69891081110698,4.910783145218,5.05188169979532,3.20347873139252,4.09365799253363,9.81208918976006,1.48418066444991,0,1.9531789784444,0.164254312027618,0,0.581051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0.145016693914229,0,0.445160178233687,0,0,0,0,0,5.35180989612088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.974853958525138,2.11300293513511,0,0,0,1.10273068709225,1.32687795048244,1.75380354101505,0,0,0,0.6196469961995,0,0,0,0,0,3.79993743535795,10.8667314676768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,1.67121139316383,0.593929361665277,4.30024982938925,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,1.24415835064723,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.113942055847001,0,0.987334088507493,0.108647371922008,1.27600463892768,0.457987967009312,17.0571128325963,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,1.22206028986725,0,0,0,0,2.40773294189637,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.52418000472609,2.40780445460263,0.483781656445426,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0.798716001995964,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,1.08599920350743,5.18532894720761,0.326587360109409,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,1.10961172300523,0.189403005275089,1.25783950876288,0,1.60188047877847,0.907385542579434,0.310874401165561,0.443565449968902,0.955780602982214,0,0,0.414706207840855,0.53168342911599,0.521745061811734,0,1.14241563650639,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,3.77735275701072,2.02049693259551,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0.219284049578707,0.353378291891762,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,7.43990036333503,3.69740502905135,11.6809171773423,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0.143444410785353,0.665320713092027,0,0,0,0,2.34640942403454,0.488965776731466,0,0,0,0 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| ||
|short_description=p@chr12:8798958..8798980,- | |||
}} | }} |
Latest revision as of 13:09, 24 July 2015
Short description: | p@chr12:8798958..8798980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8798958..8798980, - |
Coexpression cluster: | C628_Adipocyte_Preadipocyte_Fibroblast_tenocyte_Smooth_Placental_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.44e-20 | 15 |
preadipocyte | 2.20e-16 | 12 |
fibroblast | 6.80e-15 | 76 |
fibroblast of tunica adventitia of artery | 9.20e-13 | 4 |
fibroblast of the aortic adventitia | 9.20e-13 | 4 |
adipocyte of omentum tissue | 3.89e-11 | 3 |
fibrocyte | 4.75e-11 | 3 |
tendon cell | 4.75e-11 | 3 |
preadipocyte of the breast | 5.60e-11 | 3 |
omentum preadipocyte | 8.85e-11 | 3 |
smooth muscle cell of the subclavian artery | 8.65e-10 | 5 |
adipocyte of breast | 8.97e-08 | 2 |
multi fate stem cell | 5.37e-07 | 427 |
mesenchymal cell | 7.05e-07 | 354 |
somatic stem cell | 9.55e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.48e-20 | 6 |
peritoneum | 3.48e-20 | 6 |
abdominal cavity | 3.48e-20 | 6 |
visceral peritoneum | 3.48e-20 | 6 |
cavity lining | 4.69e-17 | 12 |
serous membrane | 4.69e-17 | 12 |
artery wall | 9.20e-13 | 4 |
tunica adventitia of artery | 9.20e-13 | 4 |
adventitia | 9.20e-13 | 4 |
tunica adventitia of blood vessel | 9.20e-13 | 4 |
aorta tunica adventitia | 9.20e-13 | 4 |
aorta wall | 9.20e-13 | 4 |
dense regular connective tissue | 4.75e-11 | 3 |
tendon | 4.75e-11 | 3 |
regular connective tissue | 4.75e-11 | 3 |
chest | 1.72e-10 | 11 |
organ component layer | 4.13e-10 | 66 |
adipose tissue | 5.72e-10 | 14 |
thoracic segment blood vessel | 8.65e-10 | 5 |
subclavian artery | 8.65e-10 | 5 |
breast | 2.56e-08 | 10 |
connective tissue | 7.58e-08 | 371 |
perirenal fat | 1.56e-07 | 2 |
systemic artery | 1.90e-07 | 33 |
systemic arterial system | 1.90e-07 | 33 |
blood vessel layer | 2.64e-07 | 7 |
muscle structure | 4.32e-07 | 2 |
muscle organ | 4.32e-07 | 2 |
trunk blood vessel | 5.25e-07 | 7 |