FFCP PHASE1:Hg19::chr12:66342468..66342497,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:66342468..66342497,-
|short_description=p1@ENST00000544279
|description=CAGE_peak_1_at_ENST00000544279_5end
|association_with_transcript=-209bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-209bp_to_ENST00000544279_5end | |||
|cluster_id=chr12:66342468..66342497,- | |||
|description=CAGE_peak_1_at_ENST00000544279_5end | |||
|id=chr12:66342468..66342497,- | |||
|ontology_enrichment_celltype=CL:0002139!1.14e-16!24;CL:0000115!9.89e-15!35;CL:0000220!3.61e-13!246;CL:0002321!7.11e-13!248;CL:0002078!4.39e-11!44;CL:0000071!2.70e-10!18;CL:0002546!2.70e-10!18;CL:0000213!4.73e-10!57;CL:0000215!4.73e-10!57;CL:0000222!9.82e-10!119;CL:0005020!1.30e-08!6;CL:0002138!1.30e-08!6;CL:0005022!1.30e-08!6;CL:0000076!1.75e-08!62;CL:0002543!2.12e-08!6;CL:0000066!1.49e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.03e-24;24!CL:0002138;6.04e-21;6!CL:0000115;1.91e-17;36!CL:0002078;7.40e-15;45!CL:0002144;3.25e-11;3!CL:0000071;2.19e-10;18!CL:0000213;4.01e-10;58!CL:0000215;4.01e-10;58!CL:0000228;7.55e-09;1!CL:0002581;7.55e-09;1!CL:0002372;7.55e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.95e-24,24;CL:0000115,9.69e-24,36;CL:0005020,9.12e-21,6;CL:0002138,9.12e-21,6;CL:0005022,9.12e-21,6;CL:0002078,1.26e-18,45;CL:0000213,4.86e-14,58;CL:0000215,4.86e-14,58;CL:0002144,2.64e-11,3;CL:0000071,1.80e-10,18;CL:0002546,1.80e-10,18;CL:0002581,7.27e-09,1;CL:0000228,8.49e-09,1;CL:0002372,8.49e-09,1;CL:0000066,1.48e-07,253;CL:0000222,5.82e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;6.04e-21;6!CL:0002546;2.19e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,9.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.90e-12!79;UBERON:0007798!4.90e-12!79;UBERON:0000055!9.57e-12!69;UBERON:0004535!2.24e-10!110;UBERON:0001986!2.70e-10!18;UBERON:0004638!2.70e-10!18;UBERON:0004852!2.70e-10!18;UBERON:0001009!9.19e-10!113;UBERON:0000487!3.63e-09!22;UBERON:0004872!3.68e-09!84;UBERON:0001981!1.46e-08!60;UBERON:0007500!1.46e-08!60;UBERON:0004537!1.46e-08!60;UBERON:0006965!1.46e-08!60;UBERON:0006914!1.47e-07!25;UBERON:0000483!1.60e-07!309;UBERON:0000490!1.83e-07!138;UBERON:0003914!2.04e-07!118;UBERON:0000119!2.97e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;9.04e-16;8!UBERON:0004536;9.04e-16;8!UBERON:0006558;9.04e-16;8!UBERON:0002465;1.18e-12;10!UBERON:0010523;3.25e-11;3!UBERON:0001915;3.25e-11;3!UBERON:0001982;3.25e-11;3!UBERON:0004638;2.19e-10;18!UBERON:0001986;2.19e-10;18!UBERON:0004852;2.19e-10;18!UBERON:0000487;1.82e-08;22!UBERON:0006914;1.99e-07;25!UBERON:0001264;2.07e-07;10!UBERON:0000490;5.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.23e-15,8;UBERON:0004536,1.23e-15,8;UBERON:0006558,1.23e-15,8;UBERON:0002465,1.50e-12,10;UBERON:0010523,2.64e-11,3;UBERON:0001915,2.64e-11,3;UBERON:0001982,2.64e-11,3;UBERON:0004638,1.80e-10,18;UBERON:0001986,1.80e-10,18;UBERON:0004852,1.80e-10,18;UBERON:0000055,1.19e-09,68;UBERON:0000487,1.56e-08,22;UBERON:0002049,3.29e-08,78;UBERON:0007798,3.29e-08,78;UBERON:0001264,1.64e-07,10;UBERON:0006914,1.74e-07,25 | |||
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| ||
|short_description=p1@ENST00000544279 | |||
}} | }} |
Latest revision as of 11:29, 24 July 2015
Short description: | p1@ENST00000544279 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000544279_5end |
Coexpression cluster: | NA |
Association with transcript: | -209bp_to_ENST00000544279_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.95e-24 | 24 |
endothelial cell | 9.69e-24 | 36 |
lymphangioblast | 9.12e-21 | 6 |
endothelial cell of lymphatic vessel | 9.12e-21 | 6 |
vascular lymphangioblast | 9.12e-21 | 6 |
meso-epithelial cell | 1.26e-18 | 45 |
lining cell | 4.86e-14 | 58 |
barrier cell | 4.86e-14 | 58 |
capillary endothelial cell | 2.64e-11 | 3 |
blood vessel endothelial cell | 1.80e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.80e-10 | 18 |
perirenal preadipocyte | 7.27e-09 | 1 |
multinucleate cell | 8.49e-09 | 1 |
myotube | 8.49e-09 | 1 |
epithelial cell | 1.48e-07 | 253 |
mesodermal cell | 5.82e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.23e-15 | 8 |
lymph vasculature | 1.23e-15 | 8 |
lymphatic part of lymphoid system | 1.23e-15 | 8 |
lymphoid system | 1.50e-12 | 10 |
microcirculatory vessel | 2.64e-11 | 3 |
endothelium of capillary | 2.64e-11 | 3 |
capillary | 2.64e-11 | 3 |
blood vessel endothelium | 1.80e-10 | 18 |
endothelium | 1.80e-10 | 18 |
cardiovascular system endothelium | 1.80e-10 | 18 |
vessel | 1.19e-09 | 68 |
simple squamous epithelium | 1.56e-08 | 22 |
vasculature | 3.29e-08 | 78 |
vascular system | 3.29e-08 | 78 |
pancreas | 1.64e-07 | 10 |
squamous epithelium | 1.74e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 9.17e-09 | 1 |