FFCP PHASE1:Hg19::chr12:5542952..5542976,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:5542952..5542976,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_at_chr12:5542952..5542976,- | |description=CAGE_peak_at_chr12:5542952..5542976,- | ||
|id=chr12:5542952..5542976,- | |id=chr12:5542952..5542976,- | ||
|ontology_enrichment_celltype=CL:0002620!3.33e-09!23 | |ontology_enrichment_celltype=CL:0002620!3.33e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.11e-12;23!CL:0000064;4.32e-07;3!CL:0000067;4.32e-07;3!CL:0005012;4.32e-07;3!CL:0002304;4.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.07e-11,23;CL:0000064,5.12e-07,3;CL:0000067,5.12e-07,3;CL:0005012,5.12e-07,3;CL:0002304,5.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.34e-07;3 | |||
|ontology_enrichment_disease=DOID:17!8.36e-08!5;DOID:450!8.36e-08!5;DOID:66!8.36e-08!5;DOID:423!8.36e-08!5;DOID:0080000!8.36e-08!5;DOID:11722!8.36e-08!5 | |ontology_enrichment_disease=DOID:17!8.36e-08!5;DOID:450!8.36e-08!5;DOID:66!8.36e-08!5;DOID:423!8.36e-08!5;DOID:0080000!8.36e-08!5;DOID:11722!8.36e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.09e-09;5!DOID:450;3.09e-09;5!DOID:66;3.09e-09;5!DOID:423;3.09e-09;5!DOID:0080000;3.09e-09;5!DOID:11722;3.09e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.02e-09,5;DOID:450,3.02e-09,5;DOID:66,3.02e-09,5;DOID:423,3.02e-09,5;DOID:0080000,3.02e-09,5;DOID:11722,3.02e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.78e-10!115;UBERON:0002097!2.96e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.97e-11;41!UBERON:0001905;4.33e-11;2!UBERON:0002757;4.33e-11;2!UBERON:0010134;4.33e-11;2!UBERON:0005408;4.33e-11;2!UBERON:0001899;4.33e-11;2!UBERON:0002199;5.99e-10;46!UBERON:0002416;5.99e-10;46!UBERON:0003102;1.01e-07;50!UBERON:0001778;4.32e-07;3!UBERON:0001775;4.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.13e-13,41;UBERON:0002199,6.41e-12,46;UBERON:0002416,6.41e-12,46;UBERON:0001905,4.35e-11,2;UBERON:0002757,4.35e-11,2;UBERON:0010134,4.35e-11,2;UBERON:0005408,4.35e-11,2;UBERON:0001899,4.35e-11,2;UBERON:0001778,5.12e-07,3;UBERON:0001775,5.12e-07,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,2.07976597760949,0.665188192387692,1.31752178539689,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,10.404598869954,13.6676728843883,0.423863802319124,1.50045548042201,0.515262646192195,1.28820270022815,1.30281799432113,0.337552664482532,0.0974370051611986,2.01947019395292,19.7907282080944,0,0.710019185033229,0.604512589365842,0,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,1.97081688457631,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0,1.47495334833363,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.460385919864187,0,0,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767693373934002,0,0,0,0.179872457583315,0,0,0,4.75530963519025,0,0,0,0,0,0,0,0,0,2.19225442626881,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,1.19548792950642,0.276283915531148,0,0,0,3.73247505194169,0,0,0,0.394573622547734,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.54810963903714,0.295547618953547,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0.671834724867263,8.64719720501769,2.32991899054908,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.439656701034247,0,0,0,0,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90402606084398,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,2.1160556621441,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0.300841313397029,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,2.48105589194647,0,0,63.2128166336378,11.7699302776588,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,1.82631744101899,0.863710364874486,0,1.42953088353313,0,0,0.695433089210318,0,0,0,0,0,0,0,1.69354820076372,2.06196181689645,0,0,0.335566295393377,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0,1.18948980281472,0.187967835959707,1.93373663920732,0,0,0,0,2.92134555298607,0,0.573358332605805,0,0,0,1.5870805215462,0,0,3.02838593486652,0.378499274505237,0,2.4072715192173,0,0,0.275684698604535,0.250707539292375,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.358611026963382,0.665320713092027,0,0,1.9307228228694,0,0,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,2.07976597760949,0.665188192387692,1.31752178539689,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,10.404598869954,13.6676728843883,0.423863802319124,1.50045548042201,0.515262646192195,1.28820270022815,1.30281799432113,0.337552664482532,0.0974370051611986,2.01947019395292,19.7907282080944,0,0.710019185033229,0.604512589365842,0,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,1.97081688457631,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0,1.47495334833363,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.460385919864187,0,0,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767693373934002,0,0,0,0.179872457583315,0,0,0,4.75530963519025,0,0,0,0,0,0,0,0,0,2.19225442626881,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,1.19548792950642,0.276283915531148,0,0,0,3.73247505194169,0,0,0,0.394573622547734,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.54810963903714,0.295547618953547,0.438770794307945,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0.671834724867263,8.64719720501769,2.32991899054908,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.439656701034247,0,0,0,0,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90402606084398,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.28874165176289,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,2.1160556621441,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0.300841313397029,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,2.48105589194647,0,0,63.2128166336378,11.7699302776588,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,1.82631744101899,0.863710364874486,0,1.42953088353313,0,0,0.695433089210318,0,0,0,0,0,0,0,1.69354820076372,2.06196181689645,0,0,0.335566295393377,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0,1.18948980281472,0.187967835959707,1.93373663920732,0,0,0,0,2.92134555298607,0,0.573358332605805,0,0,0,1.5870805215462,0,0,3.02838593486652,0.378499274505237,0,2.4072715192173,0,0,0.275684698604535,0.250707539292375,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.358611026963382,0.665320713092027,0,0,1.9307228228694,0,0,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p@chr12:5542952..5542976,- | |short_description=p@chr12:5542952..5542976,- | ||
}} | }} |
Latest revision as of 10:08, 24 July 2015
Short description: | p@chr12:5542952..5542976, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:5542952..5542976, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.07e-11 | 23 |
ciliated cell | 5.12e-07 | 3 |
ciliated epithelial cell | 5.12e-07 | 3 |
multi-ciliated epithelial cell | 5.12e-07 | 3 |
non-pigmented ciliary epithelial cell | 5.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.13e-13 | 41 |
integument | 6.41e-12 | 46 |
integumental system | 6.41e-12 | 46 |
pineal body | 4.35e-11 | 2 |
regional part of epithalamus | 4.35e-11 | 2 |
secretory circumventricular organ | 4.35e-11 | 2 |
circumventricular organ | 4.35e-11 | 2 |
epithalamus | 4.35e-11 | 2 |
ciliary epithelium | 5.12e-07 | 3 |
ciliary body | 5.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.02e-09 | 5 |
myotonic disease | 3.02e-09 | 5 |
muscle tissue disease | 3.02e-09 | 5 |
myopathy | 3.02e-09 | 5 |
muscular disease | 3.02e-09 | 5 |
myotonic dystrophy | 3.02e-09 | 5 |