FFCP PHASE1:Hg19::chr12:53202108..53202119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53202108..53202119,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr12:53202108..53202119,+ | |description=CAGE_peak_at_chr12:53202108..53202119,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.58e-34;1!UBERON:0008814;1.17e-17;2!UBERON:0010056;1.17e-17;2 | |ontology_enrichment_development_v019=UBERON:0009143;2.58e-34;1!UBERON:0008814;1.17e-17;2!UBERON:0010056;1.17e-17;2 | ||
|ontology_enrichment_disease=DOID:3151!7.55e-14!1;DOID:3149!7.55e-14!1;DOID:3451!1.45e-07!2;DOID:4159!1.45e-07!2;DOID:0060122!1.45e-07!2;DOID:3910!1.99e-07!2 | |ontology_enrichment_disease=DOID:3151!7.55e-14!1;DOID:3149!7.55e-14!1;DOID:3451!1.45e-07!2;DOID:4159!1.45e-07!2;DOID:0060122!1.45e-07!2;DOID:3910!1.99e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.59e-18!11;UBERON:0001723!7.72e-18!3;UBERON:0001033!7.72e-18!3;UBERON:0010056!7.72e-18!3;UBERON:0002372!3.08e-14!1;UBERON:0001961!3.08e-14!1;UBERON:0001744!3.08e-14!1;UBERON:0001735!3.08e-14!1;UBERON:0000997!1.83e-13!1;UBERON:0005056!1.83e-13!1;UBERON:0001042!4.65e-12!10;UBERON:0009145!4.65e-12!10;UBERON:0000002!2.89e-09!6;UBERON:0001560!2.89e-09!6;UBERON:0000065!3.69e-08!53;UBERON:0000341!1.05e-07!2;UBERON:0003127!1.87e-07!2;UBERON:0004903!1.99e-07!2;UBERON:0002173!1.99e-07!2;UBERON:0002186!1.99e-07!2;UBERON:0000078!6.28e-07!18;UBERON:0000072!9.48e-07!46 | |ontology_enrichment_uberon=UBERON:0006562!1.59e-18!11;UBERON:0001723!7.72e-18!3;UBERON:0001033!7.72e-18!3;UBERON:0010056!7.72e-18!3;UBERON:0002372!3.08e-14!1;UBERON:0001961!3.08e-14!1;UBERON:0001744!3.08e-14!1;UBERON:0001735!3.08e-14!1;UBERON:0000997!1.83e-13!1;UBERON:0005056!1.83e-13!1;UBERON:0001042!4.65e-12!10;UBERON:0009145!4.65e-12!10;UBERON:0000002!2.89e-09!6;UBERON:0001560!2.89e-09!6;UBERON:0000065!3.69e-08!53;UBERON:0000341!1.05e-07!2;UBERON:0003127!1.87e-07!2;UBERON:0004903!1.99e-07!2;UBERON:0002173!1.99e-07!2;UBERON:0002186!1.99e-07!2;UBERON:0000078!6.28e-07!18;UBERON:0000072!9.48e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.13e-44;3!UBERON:0001033;2.13e-44;3!UBERON:0002372;2.58e-34;1!UBERON:0001961;2.58e-34;1!UBERON:0001744;2.58e-34;1!UBERON:0001042;2.58e-34;1!UBERON:0001735;2.58e-34;1!UBERON:0000341;6.48e-18;2!UBERON:0006562;6.48e-18;2!UBERON:0001043;2.07e-12;3!UBERON:0000165;2.33e-11;28!UBERON:0000974;7.58e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001723;2.13e-44;3!UBERON:0001033;2.13e-44;3!UBERON:0002372;2.58e-34;1!UBERON:0001961;2.58e-34;1!UBERON:0001744;2.58e-34;1!UBERON:0001042;2.58e-34;1!UBERON:0001735;2.58e-34;1!UBERON:0000341;6.48e-18;2!UBERON:0006562;6.48e-18;2!UBERON:0001043;2.07e-12;3!UBERON:0000165;2.33e-11;28!UBERON:0000974;7.58e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.38e-44,3;UBERON:0001033,2.38e-44,3;UBERON:0010056,2.38e-44,3;UBERON:0002372,1.84e-34,1;UBERON:0001961,1.84e-34,1;UBERON:0001744,1.84e-34,1;UBERON:0001735,1.84e-34,1;UBERON:0001042,2.78e-30,10;UBERON:0009145,2.78e-30,10;UBERON:0006562,1.28e-27,11;UBERON:0000341,7.67e-18,2;UBERON:0001557,2.27e-16,19;UBERON:0000166,2.99e-14,22;UBERON:0001043,2.07e-12,3;UBERON:0009143,2.07e-12,3;UBERON:0000165,5.32e-11,29;UBERON:0000930,5.32e-11,29;UBERON:0000153,4.34e-09,62;UBERON:0007811,4.34e-09,62;UBERON:0000161,5.28e-09,36;UBERON:0008814,2.70e-08,18;UBERON:0000072,4.69e-07,47;UBERON:0001444,8.57e-07,49 | |||
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|short_description=p@chr12:53202108..53202119,+ | |short_description=p@chr12:53202108..53202119,+ | ||
}} | }} |
Latest revision as of 09:41, 24 July 2015
Short description: | p@chr12:53202108..53202119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53202108..53202119, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.38e-44 | 3 |
gustatory system | 2.38e-44 | 3 |
future tongue | 2.38e-44 | 3 |
tonsil | 1.84e-34 | 1 |
mucosa-associated lymphoid tissue | 1.84e-34 | 1 |
lymphoid tissue | 1.84e-34 | 1 |
tonsillar ring | 1.84e-34 | 1 |
chordate pharynx | 2.78e-30 | 10 |
pharyngeal region of foregut | 2.78e-30 | 10 |
pharynx | 1.28e-27 | 11 |
throat | 7.67e-18 | 2 |
upper respiratory tract | 2.27e-16 | 19 |
oral opening | 2.99e-14 | 22 |
esophagus | 2.07e-12 | 3 |
esophageal region | 2.07e-12 | 3 |
mouth | 5.32e-11 | 29 |
stomodeum | 5.32e-11 | 29 |
anterior region of body | 4.34e-09 | 62 |
craniocervical region | 4.34e-09 | 62 |
orifice | 5.28e-09 | 36 |
pharyngeal arch system | 2.70e-08 | 18 |
segment of respiratory tract | 4.69e-07 | 47 |
subdivision of head | 8.57e-07 | 49 |