FFCP PHASE1:Hg19::chr12:53200507..53200520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53200507..53200520,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_at_chr12:53200507..53200520,- | |description=CAGE_peak_at_chr12:53200507..53200520,- | ||
|id=chr12:53200507..53200520,- | |id=chr12:53200507..53200520,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.61e-34;1!UBERON:0008814;9.87e-18;2!UBERON:0010056;9.87e-18;2 | |||
|ontology_enrichment_disease=DOID:3151!1.97e-11!1;DOID:3149!1.97e-11!1;DOID:178!2.42e-11!1;DOID:326!2.42e-11!1;DOID:3978!2.42e-11!1;DOID:3394!2.42e-11!1;DOID:5844!2.42e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.42e-20!2;UBERON:0001723!8.77e-15!3;UBERON:0001033!8.77e-15!3;UBERON:0010056!8.77e-15!3;UBERON:0002372!1.31e-11!1;UBERON:0001961!1.31e-11!1;UBERON:0001744!1.31e-11!1;UBERON:0001735!1.31e-11!1;UBERON:0000989!2.68e-11!1;UBERON:0008811!2.68e-11!1;UBERON:0006258!2.68e-11!1;UBERON:0005876!2.68e-11!1;UBERON:0004874!2.68e-11!1;UBERON:0000997!4.01e-11!1;UBERON:0005056!4.01e-11!1;UBERON:0006834!4.91e-11!1;UBERON:0001042!7.31e-10!10;UBERON:0009145!7.31e-10!10;UBERON:0000078!2.73e-09!18;UBERON:0006562!5.19e-09!11;UBERON:0000166!5.53e-08!21;UBERON:0000002!1.63e-07!6;UBERON:0001560!1.63e-07!6;UBERON:0007023!3.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.74e-45;3!UBERON:0001033;8.74e-45;3!UBERON:0002372;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0000341;6.48e-18;2!UBERON:0006562;9.87e-18;2!UBERON:0001043;2.31e-12;3!UBERON:0000165;2.21e-11;28!UBERON:0000974;7.58e-07;6!UBERON:0000020;9.53e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.81e-45,3;UBERON:0001033,7.81e-45,3;UBERON:0010056,7.81e-45,3;UBERON:0002372,7.06e-34,1;UBERON:0001961,7.06e-34,1;UBERON:0001744,7.06e-34,1;UBERON:0001735,7.06e-34,1;UBERON:0001042,2.51e-30,10;UBERON:0009145,2.51e-30,10;UBERON:0006562,1.17e-27,11;UBERON:0000341,6.48e-18,2;UBERON:0001557,2.16e-16,19;UBERON:0000166,2.85e-14,22;UBERON:0001043,2.31e-12,3;UBERON:0009143,2.31e-12,3;UBERON:0000165,5.14e-11,29;UBERON:0000930,5.14e-11,29;UBERON:0000153,4.15e-09,62;UBERON:0007811,4.15e-09,62;UBERON:0000161,5.14e-09,36;UBERON:0008814,2.25e-08,18;UBERON:0000072,4.59e-07,47;UBERON:0001444,8.40e-07,49 | |||
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|short_description=p@chr12:53200507..53200520,- | |short_description=p@chr12:53200507..53200520,- | ||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200507..53200520, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200507..53200520, - |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 7.81e-45 | 3 |
gustatory system | 7.81e-45 | 3 |
future tongue | 7.81e-45 | 3 |
tonsil | 7.06e-34 | 1 |
mucosa-associated lymphoid tissue | 7.06e-34 | 1 |
lymphoid tissue | 7.06e-34 | 1 |
tonsillar ring | 7.06e-34 | 1 |
chordate pharynx | 2.51e-30 | 10 |
pharyngeal region of foregut | 2.51e-30 | 10 |
pharynx | 1.17e-27 | 11 |
throat | 6.48e-18 | 2 |
upper respiratory tract | 2.16e-16 | 19 |
oral opening | 2.85e-14 | 22 |
esophagus | 2.31e-12 | 3 |
esophageal region | 2.31e-12 | 3 |
mouth | 5.14e-11 | 29 |
stomodeum | 5.14e-11 | 29 |
anterior region of body | 4.15e-09 | 62 |
craniocervical region | 4.15e-09 | 62 |
orifice | 5.14e-09 | 36 |
pharyngeal arch system | 2.25e-08 | 18 |
segment of respiratory tract | 4.59e-07 | 47 |
subdivision of head | 8.40e-07 | 49 |