FFCP PHASE1:Hg19::chr12:52629080..52629112,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:52629080..52629112,+ | |||
|coexpression_cluster_id=C689 | |||
|description=CAGE_peak_at_chr12:52629080..52629112,+ | |||
|id=chr12:52629080..52629112,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.47e-44!254;CL:0000076!1.18e-13!62;CL:0000063!6.46e-12!578;CL:0000077!1.90e-11!19;CL:0000213!1.74e-10!57;CL:0000215!1.74e-10!57;CL:0002076!1.03e-09!43;CL:0002368!1.04e-09!13;CL:0000223!2.10e-07!59;CL:0002202!5.85e-07!9;CL:0002632!5.85e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.65e-16;19!CL:0002368;2.54e-13;13!CL:0002202;6.84e-09;9!CL:0002632;6.84e-09;9!CL:0002076;6.34e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.40e-39,253;CL:0000077,4.02e-16,19;CL:0002368,3.92e-13,13;CL:0000076,4.25e-12,63;CL:0002076,5.18e-11,42;CL:0002202,7.23e-09,9;CL:0002632,7.23e-09,9;CL:0000213,4.22e-08,58;CL:0000215,4.22e-08,58;CL:0000223,6.40e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.54e-09;29 | |||
|ontology_enrichment_disease=DOID:305!1.73e-11!106;DOID:0050687!6.37e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.78e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0008947!2.12e-14!38;UBERON:0003258!2.12e-14!38;UBERON:0000464!7.17e-14!104;UBERON:0000466!6.22e-13!126;UBERON:0000065!7.41e-13!53;UBERON:0001048!7.84e-13!168;UBERON:0004119!1.40e-12!169;UBERON:0000925!1.40e-12!169;UBERON:0006595!1.40e-12!169;UBERON:0000077!9.10e-12!130;UBERON:0001041!5.06e-11!98;UBERON:0001004!1.47e-10!72;UBERON:0000072!1.74e-09!46;UBERON:0001737!5.34e-09!9;UBERON:0005631!1.22e-08!14;UBERON:0000158!1.22e-08!14;UBERON:0009569!1.67e-08!113;UBERON:0005153!2.58e-08!37;UBERON:0001007!5.43e-08!155;UBERON:0001555!5.43e-08!155;UBERON:0007026!5.43e-08!155;UBERON:0005911!5.60e-08!82;UBERON:0000915!1.19e-07!52;UBERON:0005178!1.25e-07!34;UBERON:0002224!1.25e-07!34;UBERON:0002553!1.31e-07!70;UBERON:0000063!1.45e-07!97;UBERON:0004921!2.12e-07!129;UBERON:0004185!2.12e-07!129;UBERON:0003124!2.37e-07!7;UBERON:0005181!3.24e-07!35;UBERON:0003886!7.04e-07!63;UBERON:0007625!7.86e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.20e-13;9!UBERON:0001557;3.20e-13;9!UBERON:0000065;4.59e-13;44!UBERON:0000072;2.04e-11;37!UBERON:0004807;3.16e-07;22!UBERON:0005631;3.38e-07;10!UBERON:0000158;3.38e-07;10!UBERON:0001004;6.57e-07;65!UBERON:0005911;6.61e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.12e-14,38;UBERON:0003258,4.12e-14,38;UBERON:0000065,2.26e-13,54;UBERON:0001737,3.21e-13,9;UBERON:0004119,1.08e-12,160;UBERON:0000925,1.08e-12,160;UBERON:0006595,1.08e-12,160;UBERON:0005631,1.37e-11,14;UBERON:0000158,1.37e-11,14;UBERON:0001048,4.03e-11,160;UBERON:0001004,4.17e-11,74;UBERON:0003124,1.21e-10,7;UBERON:0000072,2.27e-10,47;UBERON:0001041,5.33e-10,87;UBERON:0005911,6.96e-08,82;UBERON:0001007,9.28e-08,145;UBERON:0001555,9.28e-08,145;UBERON:0007026,9.28e-08,145;UBERON:0004921,2.41e-07,118 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,12.0409628885739,97.6921635161399,7.8638893966862,3.9565046734268,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,19.3078457140575,7.53014796945625,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88300474649071,0,0,0.189069634328136,6.65188192387692,3.07421749925941,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,1.04142150482278,0.56530794192401,3.77549492588915,9.62913146790236,1.46296476575767,0,0,0,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,11.3419872703446,0,0,0.112611480483322,0,0,0.549605231791222,0,0,4.79703457356788,0.993943903390637,0.12663051166458,0,0,0,2.24271040056923,2.1349799145941,1.97334038733728,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.427114777637135,0,0.600182192168805,0,1.54584324027377,0.558350568994769,0.843881661206331,1.16924406193438,0,0.0920498986422993,0,0,0.201504196455281,1.69560592310488,2.31913023795956,0,1.14721838155602,0.121973706129595,0,0,0,0,0,0,2.57296375277154,0,0,0,6.03364680203204,5.05754070234305,3.13314338848527,5.73528658208448,4.13970943775572,4.50814176311084,4.71909578560575,2.94332197688019,3.8474715694639,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,0.514703430895577,1.20725313949488,2.24803506515239,0.100528972411631,0.0925884451585296,0,0,10.1031939417691,0,0.352226082707465,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0,0.895585227028483,2.61570544662566,6.51750554580859,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,3.01439377059586,2.61460037580088,21.6941390865064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,2.3195768543631,0.630809660135739,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0,3.94065842880137,4.99306318531491,3.62868351995616,0.248107807818777,0.61384789315225,3.36792113319688,0.384417447767103,1.53512174720011,1.60853921143608,7.42090332224955,0,0,0,0,0,0,30.6774899564026,3.40699659062816,0,0,0,3.15839729035188,1.07821471946181,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.863663664408557,0,0,0,1.78413391131527,5.81753206250107,0.447749509444357,0,0,1.02580050046556,9.18441007959176,5.53143270929315,0.206082023295445,0,0,0,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,2.47927373041467,10.1860735703506,1.02090169995667,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0.192444225451024,7.37332503089366,22.8671068208777,0.188287601553558,3.44404298136984,16.8471475667626,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,4.53614521001611,0.593929361665277,1.53580351049616,0,0,0,0,0.844501632511974,0.398495976502139,0,0,0,0,0,4.40354920621902,3.40140231883657,0,0,0,0,0,0,0,0,0.61221999997337,0.724999575434793,0,3.30529745380596,2.36387681767936,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0,0.113942055847001,0,1.16684937732704,0.108647371922008,6.06102203490647,7.23620987874712,27.1847735769504,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0.789168805698781,0,0.30607276163049,0,0,0,0.664653872707185,0.992975867626496,0.313932918407225,0,0.284609546029793,0,3.47119476670262,0,2.43765778425127,0.34945333648406,0,2.70917727609438,1.75414361006845,2.87404099686232,0.193978032976839,0,0,0,0,0,2.54216797555244,0.561111741760736,0.426905989478705,19.3815321294666,0.72045208577053,0,0,0.864328787928898,0,4.71388069233591,0,0,0,0,0,0,0,2.14882720709979,0,0,0,0,1.19807400299395,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.551639951094387,0,0.105600336519406,0,1.15149118391667,0,0,0,0,0,0,3.59190574687462,0,0,0,0,0,0,0,1.36869470307464,0.704815022316672,0.533937062838473,0.314408610199332,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,1.11507737014592,0,0.465788870628778,0,0.265841714557995,1.04349012362347,0.601030435988874,1.14241563650639,0.813741466409323,0,1.18151612746737,0,1.19428766609585,0,0.686791410365586,0,0,0,1.71553273099941,6.7858515910955,36.0462421564513,5.55653938377201,10.0342048847652,13.7898407632745,5.5584260488975,11.6220546276715,0.883445729729405,16.5906072912987,3.54779125371453,0,1.38172136692479,5.46947921119288,0,0,0,0,0,3.44082072255207,0.845248493434508,0,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p@chr12:52629080..52629112,+ | |||
}} |
Latest revision as of 09:30, 24 July 2015
Short description: | p@chr12:52629080..52629112, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52629080..52629112, + |
Coexpression cluster: | C689_Alveolar_mesothelioma_Retinal_Mesothelial_Prostate_bile_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.40e-39 | 253 |
mesothelial cell | 4.02e-16 | 19 |
respiratory epithelial cell | 3.92e-13 | 13 |
squamous epithelial cell | 4.25e-12 | 63 |
endo-epithelial cell | 5.18e-11 | 42 |
epithelial cell of tracheobronchial tree | 7.23e-09 | 9 |
epithelial cell of lower respiratory tract | 7.23e-09 | 9 |
lining cell | 4.22e-08 | 58 |
barrier cell | 4.22e-08 | 58 |
endodermal cell | 6.40e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 4.12e-14 | 38 |
endoderm of foregut | 4.12e-14 | 38 |
respiratory tract | 2.26e-13 | 54 |
larynx | 3.21e-13 | 9 |
endoderm-derived structure | 1.08e-12 | 160 |
endoderm | 1.08e-12 | 160 |
presumptive endoderm | 1.08e-12 | 160 |
extraembryonic membrane | 1.37e-11 | 14 |
membranous layer | 1.37e-11 | 14 |
primordium | 4.03e-11 | 160 |
respiratory system | 4.17e-11 | 74 |
chorion | 1.21e-10 | 7 |
segment of respiratory tract | 2.27e-10 | 47 |
foregut | 5.33e-10 | 87 |
endo-epithelium | 6.96e-08 | 82 |
digestive system | 9.28e-08 | 145 |
digestive tract | 9.28e-08 | 145 |
primitive gut | 9.28e-08 | 145 |
subdivision of digestive tract | 2.41e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.78e-10 | 106 |