FFCP PHASE1:Hg19::chr12:52080755..52080778,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:52080755..52080778,+ to FFCP PHASE1:Hg19::chr12:52080755..52080778,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52080755..52080778,+ | |||
|description=CAGE_peak_at_chr12:52080755..52080778,+ | |||
|id=chr12:52080755..52080778,+ | |||
|ontology_enrichment_celltype=CL:0000071!2.87e-21!18;CL:0002546!2.87e-21!18;CL:0002139!8.19e-17!24;CL:1000413!2.15e-16!9;CL:0000213!1.43e-14!57;CL:0000215!1.43e-14!57;CL:0000222!1.78e-12!119;CL:0000076!2.01e-12!62;CL:0002543!8.56e-12!6;CL:0000115!2.06e-11!35;CL:0000220!2.55e-11!246;CL:0002544!2.87e-11!6;CL:0002321!4.28e-11!248;CL:0000144!2.76e-10!625;CL:0000548!9.19e-10!679;CL:0000004!9.19e-10!679;CL:0000255!9.19e-10!679;CL:0000012!1.40e-09!682;CL:0002078!2.68e-09!44;CL:0002371!3.65e-08!591;CL:0000055!2.32e-07!180;CL:0000003!2.69e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000071;3.98e-64;18!CL:0002139;2.12e-47;24!CL:1000413;2.08e-42;9!CL:0002543;7.39e-37;6!CL:0000115;4.29e-27;36!CL:0002544;4.01e-25;6!CL:0002618;1.61e-19;3!CL:0000213;2.42e-18;58!CL:0000215;2.42e-18;58!CL:0002078;2.73e-17;45!CL:0000076;1.35e-16;63!CL:0002573;3.37e-09;2!CL:0000346;5.96e-09;3!CL:1000428;5.96e-09;3!CL:0002032;2.49e-07;1!CL:0000557;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,6.25e-65,18;CL:0002546,6.25e-65,18;CL:0002139,5.36e-48,24;CL:1000413,3.88e-43,9;CL:0002543,4.56e-37,6;CL:0000115,4.74e-31,36;CL:0000213,8.57e-31,58;CL:0000215,8.57e-31,58;CL:0002078,4.30e-28,45;CL:0000076,4.75e-28,63;CL:0002544,1.32e-25,6;CL:0002618,2.29e-19,3;CL:0000222,8.52e-13,121;CL:0002573,2.87e-09,2;CL:0000346,5.29e-09,3;CL:1000428,5.29e-09,3;CL:0002321,3.01e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;3.98e-64;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.87e-21!18;UBERON:0004638!2.87e-21!18;UBERON:0004852!2.87e-21!18;UBERON:0000487!1.67e-16!22;UBERON:0003915!2.15e-16!9;UBERON:0004700!2.15e-16!9;UBERON:0001917!2.15e-16!9;UBERON:0001981!4.86e-14!60;UBERON:0007500!4.86e-14!60;UBERON:0004537!4.86e-14!60;UBERON:0006965!4.86e-14!60;UBERON:0006914!6.02e-14!25;UBERON:0000055!3.12e-12!69;UBERON:0004872!4.14e-12!84;UBERON:0001638!4.60e-12!9;UBERON:0003920!4.60e-12!9;UBERON:0004582!4.60e-12!9;UBERON:0000490!4.63e-11!138;UBERON:0002049!1.63e-10!79;UBERON:0007798!1.63e-10!79;UBERON:0001637!3.33e-10!42;UBERON:0003509!3.33e-10!42;UBERON:0004572!3.33e-10!42;UBERON:0003914!3.44e-09!118;UBERON:0002066!9.45e-09!5;UBERON:0004535!1.55e-08!110;UBERON:0001009!4.47e-08!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.98e-64;18!UBERON:0001986;3.98e-64;18!UBERON:0004852;3.98e-64;18!UBERON:0000487;5.81e-52;22!UBERON:0006914;2.16e-45;25!UBERON:0003915;2.08e-42;9!UBERON:0004700;2.08e-42;9!UBERON:0001917;2.08e-42;9!UBERON:0000490;1.31e-31;33!UBERON:0001638;2.01e-24;9!UBERON:0003920;2.01e-24;9!UBERON:0004582;2.01e-24;9!UBERON:0002066;6.32e-12;5!UBERON:0007500;1.33e-11;56!UBERON:0001981;1.33e-11;56!UBERON:0004537;1.33e-11;56!UBERON:0000412;5.96e-09;3!UBERON:0001992;5.96e-09;3!UBERON:0000055;8.71e-09;65!UBERON:0001637;2.45e-08;42!UBERON:0003509;2.45e-08;42!UBERON:0004572;2.45e-08;42!UBERON:0003914;7.93e-08;74!UBERON:0000947;4.88e-07;21!UBERON:0010191;4.88e-07;21!UBERON:0010260;8.07e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.25e-65,18;UBERON:0001986,6.25e-65,18;UBERON:0004852,6.25e-65,18;UBERON:0000487,1.29e-52,22;UBERON:0006914,5.78e-46,25;UBERON:0003915,3.88e-43,9;UBERON:0004700,3.88e-43,9;UBERON:0001917,3.88e-43,9;UBERON:0001638,1.46e-24,9;UBERON:0003920,1.46e-24,9;UBERON:0004582,1.46e-24,9;UBERON:0007500,7.89e-18,59;UBERON:0001981,7.89e-18,59;UBERON:0004537,7.89e-18,59;UBERON:0006965,7.89e-18,59;UBERON:0004872,1.01e-15,83;UBERON:0000055,4.32e-15,68;UBERON:0002049,8.60e-13,78;UBERON:0007798,8.60e-13,78;UBERON:0002066,7.76e-12,5;UBERON:0004535,3.47e-11,109;UBERON:0001009,8.47e-11,112;UBERON:0003914,3.38e-10,117;UBERON:0000412,5.29e-09,3;UBERON:0001992,5.29e-09,3;UBERON:0001637,2.52e-08,42;UBERON:0003509,2.52e-08,42;UBERON:0004572,2.52e-08,42;UBERON:0000490,2.03e-07,148;UBERON:0000947,3.64e-07,21;UBERON:0010191,3.64e-07,21;UBERON:0003081,6.51e-07,203;UBERON:0010260,9.01e-07,9 | |||
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| ||
|short_description=p@chr12:52080755..52080778,+ | |||
}} | }} |
Latest revision as of 09:23, 24 July 2015
Short description: | p@chr12:52080755..52080778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52080755..52080778, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 6.25e-65 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.25e-65 | 18 |
endothelial cell of vascular tree | 5.36e-48 | 24 |
endothelial cell of artery | 3.88e-43 | 9 |
vein endothelial cell | 4.56e-37 | 6 |
endothelial cell | 4.74e-31 | 36 |
lining cell | 8.57e-31 | 58 |
barrier cell | 8.57e-31 | 58 |
meso-epithelial cell | 4.30e-28 | 45 |
squamous epithelial cell | 4.75e-28 | 63 |
aortic endothelial cell | 1.32e-25 | 6 |
endothelial cell of umbilical vein | 2.29e-19 | 3 |
mesodermal cell | 8.52e-13 | 121 |
Schwann cell | 2.87e-09 | 2 |
hair follicle dermal papilla cell | 5.29e-09 | 3 |
stem cell of epidermis | 5.29e-09 | 3 |
embryonic cell | 3.01e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.25e-65 | 18 |
endothelium | 6.25e-65 | 18 |
cardiovascular system endothelium | 6.25e-65 | 18 |
simple squamous epithelium | 1.29e-52 | 22 |
squamous epithelium | 5.78e-46 | 25 |
endothelial tube | 3.88e-43 | 9 |
arterial system endothelium | 3.88e-43 | 9 |
endothelium of artery | 3.88e-43 | 9 |
vein | 1.46e-24 | 9 |
venous blood vessel | 1.46e-24 | 9 |
venous system | 1.46e-24 | 9 |
epithelial tube open at both ends | 7.89e-18 | 59 |
blood vessel | 7.89e-18 | 59 |
blood vasculature | 7.89e-18 | 59 |
vascular cord | 7.89e-18 | 59 |
splanchnic layer of lateral plate mesoderm | 1.01e-15 | 83 |
vessel | 4.32e-15 | 68 |
vasculature | 8.60e-13 | 78 |
vascular system | 8.60e-13 | 78 |
umbilical vein | 7.76e-12 | 5 |
cardiovascular system | 3.47e-11 | 109 |
circulatory system | 8.47e-11 | 112 |
epithelial tube | 3.38e-10 | 117 |
dermal papilla | 5.29e-09 | 3 |
papillary layer of dermis | 5.29e-09 | 3 |
artery | 2.52e-08 | 42 |
arterial blood vessel | 2.52e-08 | 42 |
arterial system | 2.52e-08 | 42 |
unilaminar epithelium | 2.03e-07 | 148 |
aorta | 3.64e-07 | 21 |
aortic system | 3.64e-07 | 21 |
lateral plate mesoderm | 6.51e-07 | 203 |
umbilical blood vessel | 9.01e-07 | 9 |