FFCP PHASE1:Hg19::chr12:49453217..49453224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:49453217..49453224,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr12:49453217..49453224,+ | |description=CAGE_peak_at_chr12:49453217..49453224,+ | ||
|id=chr12:49453217..49453224,+ | |id=chr12:49453217..49453224,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.44e-16!45;CL:0002057!3.56e-14!42;CL:0002009!1.58e-11!65;CL:0000839!4.27e-11!70;CL:0000557!1.44e-10!71;CL:0002194!1.91e-10!63;CL:0000576!1.91e-10!63;CL:0000040!1.91e-10!63;CL:0000559!1.91e-10!63;CL:0000766!2.30e-09!76;CL:0000763!7.62e-09!112;CL:0000049!7.62e-09!112;CL:0002031!8.17e-08!124 | |ontology_enrichment_celltype=CL:0000860!1.44e-16!45;CL:0002057!3.56e-14!42;CL:0002009!1.58e-11!65;CL:0000839!4.27e-11!70;CL:0000557!1.44e-10!71;CL:0002194!1.91e-10!63;CL:0000576!1.91e-10!63;CL:0000040!1.91e-10!63;CL:0000559!1.91e-10!63;CL:0000766!2.30e-09!76;CL:0000763!7.62e-09!112;CL:0000049!7.62e-09!112;CL:0002031!8.17e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-16;33!CL:0002057;1.71e-16;33!CL:0000764;3.08e-13;2!CL:0000558;3.08e-13;2!CL:0000473;2.53e-11;39!CL:0000234;2.53e-11;39!CL:0000576;1.83e-08;48!CL:0002581;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.06e-14,42;CL:0002057,2.06e-14,42;CL:0000764,2.43e-13,2;CL:0000765,2.43e-13,2;CL:0000050,2.43e-13,2;CL:0000038,2.43e-13,2;CL:0000558,2.43e-13,2;CL:0000547,2.43e-13,2;CL:0000549,2.43e-13,2;CL:0000550,2.43e-13,2;CL:0000552,2.43e-13,2;CL:0000473,2.35e-12,48;CL:0000234,2.35e-12,48;CL:0000839,5.97e-12,66;CL:0002009,6.08e-11,61;CL:0000557,8.94e-10,67;CL:0002194,1.77e-09,59;CL:0000576,1.77e-09,59;CL:0000040,1.77e-09,59;CL:0000559,1.77e-09,59;CL:0002031,8.11e-09,120;CL:0000763,9.51e-09,108;CL:0000049,9.51e-09,108;CL:0000766,1.95e-07,72;CL:0002581,4.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.57e-11;42!UBERON:0008425;1.45e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;5.77e-07;1!DOID:3603;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,6.49e-07,1;DOID:3603,6.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.22e-10!80;UBERON:0002390!2.47e-10!102;UBERON:0003061!2.47e-10!102;UBERON:0001474!7.18e-10!86;UBERON:0002193!1.06e-09!112;UBERON:0004765!1.94e-09!101;UBERON:0001434!1.94e-09!101;UBERON:0002204!2.02e-09!167;UBERON:0002405!4.23e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-08,76;UBERON:0002405,1.10e-07,93;UBERON:0001474,1.33e-07,82;UBERON:0004765,9.68e-07,90 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0.37129905888014,0,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.154816123316076,1.83884244895785,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,0.726991193897824,2.26725566213286,0.485168122375632,2.09186133215116,0.411167888021826,0.309706370895104,1.1507695692886,0.768482119587302,0,0,0,0,0.376484679085209,1.09162460023138,1.34834090667051,0,1.60464513538047,0,1.9791078011203,0.997318288108159,2.13112375266347,0.580418477257168,1.13477044938228,1.24564449799115,0.502497330513487,1.5644487552606,0.217188844705117,0.605399502633369,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0.673971786878971,0.150176892841506,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,1.24930726552346,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0.722878304769133,0.50133791063589,0,0,0.973269740605272,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,2.25095607382472,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0.468642863667593,0.936480230490962,0,0.149448680551801,0,0,0,0.204154171254893,0.368502951935304,0,0,0,0,1.43723628363248,0,0,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0,0,0.423863802319124,0,0.309157587715317,0,0.18611685633159,0,0,0,0.0920498986422993,0.646584227275248,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.434343920002738,0,0,0.224170287987055,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.468565659970853,0.601892199455438,0,1.03473071292505,0.664225598535437,0,0.347534457872331,0.391602314925481,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.459257792658427,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,4.44440266742331,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0.170453254832202,0,0,0,0,0.2023155617111,0,0.94443704049192,0,0.616067160352178,0,0,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0,0.471249609382746,0.404364963146632,3.17020642346017,0,0.48763373908959,0.487426979262569,2.11300293513511,0.136499911407986,0.424216295861138,0,0,0.66343897524122,2.19225442626881,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,1.05836791361941,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0,1.5602073798847,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0.19924798825107,0,0,0.20453736500431,0,0,0,0.358042349351218,0.511572370226872,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,13.4688399994141,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0,0.871507708151921,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,2.6124209448053,1.46178634172371,2.54557916864949,0.290967049465258,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.209205692624666,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0.0607495566580247,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0.246277562248017,0.511164065356265,0,0.146552233678082,1.32506888912221,0,0,0,0.704815022316672,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0.25156790175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| ||
|short_description=p@chr12:49453217..49453224,+ | |short_description=p@chr12:49453217..49453224,+ | ||
}} | }} |
Latest revision as of 08:58, 24 July 2015
Short description: | p@chr12:49453217..49453224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:49453217..49453224, + |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.06e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.06e-14 | 42 |
erythroid lineage cell | 2.43e-13 | 2 |
erythroblast | 2.43e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 2.43e-13 | 2 |
erythroid progenitor cell | 2.43e-13 | 2 |
reticulocyte | 2.43e-13 | 2 |
proerythroblast | 2.43e-13 | 2 |
basophilic erythroblast | 2.43e-13 | 2 |
polychromatophilic erythroblast | 2.43e-13 | 2 |
orthochromatic erythroblast | 2.43e-13 | 2 |
defensive cell | 2.35e-12 | 48 |
phagocyte | 2.35e-12 | 48 |
myeloid lineage restricted progenitor cell | 5.97e-12 | 66 |
macrophage dendritic cell progenitor | 6.08e-11 | 61 |
granulocyte monocyte progenitor cell | 8.94e-10 | 67 |
monopoietic cell | 1.77e-09 | 59 |
monocyte | 1.77e-09 | 59 |
monoblast | 1.77e-09 | 59 |
promonocyte | 1.77e-09 | 59 |
hematopoietic lineage restricted progenitor cell | 8.11e-09 | 120 |
myeloid cell | 9.51e-09 | 108 |
common myeloid progenitor | 9.51e-09 | 108 |
myeloid leukocyte | 1.95e-07 | 72 |
perirenal preadipocyte | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-08 | 76 |
immune system | 1.10e-07 | 93 |
bone element | 1.33e-07 | 82 |
skeletal element | 9.68e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 6.49e-07 | 1 |
mucinous cystadenocarcinoma | 6.49e-07 | 1 |