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FFCP PHASE1:Hg19::chr12:4128088..4128115,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr12:4128088..4128115,+
|coexpression_cluster_id=C196
|coexpression_cluster_id=C196
|description=CAGE_peak_at_chr12:4128088..4128115,+
|description=CAGE_peak_at_chr12:4128088..4128115,+
|id=chr12:4128088..4128115,+
|id=chr12:4128088..4128115,+
|ontology_enrichment_celltype=CL:0002322!1.77e-52!5;CL:0000039!1.18e-38!7;CL:0000586!1.18e-38!7;CL:0000148!1.92e-15!10;CL:0000541!1.92e-15!10;CL:0000147!3.24e-11!14;CL:0000710!5.04e-08!20
|ontology_enrichment_celltype=CL:0002322!1.77e-52!5;CL:0000039!1.18e-38!7;CL:0000586!1.18e-38!7;CL:0000148!1.92e-15!10;CL:0000541!1.92e-15!10;CL:0000147!3.24e-11!14;CL:0000710!5.04e-08!20
|ontology_enrichment_celltype_v019=CL:0000039;1.79e-75;7!CL:0000586;1.79e-75;7!CL:0002322;7.25e-08;5
|ontology_enrichment_celltype_v019_2=CL:0000039,1.79e-75,7;CL:0000586,1.79e-75,7;CL:0002322,7.49e-08,5
|ontology_enrichment_development_v019=UBERON:0009117;4.03e-53;10!UBERON:0005564;4.03e-53;10
|ontology_enrichment_disease=DOID:3095!4.49e-27!22;DOID:2994!4.49e-27!22
|ontology_enrichment_disease=DOID:3095!4.49e-27!22;DOID:2994!4.49e-27!22
|ontology_enrichment_disease_v019=DOID:3095;8.85e-38;22!DOID:2994;8.85e-38;22
|ontology_enrichment_disease_v019_2=DOID:3095,8.52e-38,22;DOID:2994,8.52e-38,22;DOID:305,3.00e-08,106
|ontology_enrichment_uberon=UBERON:0000473!6.84e-34!8;UBERON:0003135!8.77e-25!11;UBERON:0000991!3.61e-13!21;UBERON:0009196!3.61e-13!21;UBERON:0009117!3.61e-13!21;UBERON:0005564!3.61e-13!21;UBERON:0004176!1.38e-12!22;UBERON:0003101!1.38e-12!22;UBERON:0000079!1.38e-12!22;UBERON:0002323!3.72e-09!46;UBERON:0004458!1.35e-08!49
|ontology_enrichment_uberon=UBERON:0000473!6.84e-34!8;UBERON:0003135!8.77e-25!11;UBERON:0000991!3.61e-13!21;UBERON:0009196!3.61e-13!21;UBERON:0009117!3.61e-13!21;UBERON:0005564!3.61e-13!21;UBERON:0004176!1.38e-12!22;UBERON:0003101!1.38e-12!22;UBERON:0000079!1.38e-12!22;UBERON:0002323!3.72e-09!46;UBERON:0004458!1.35e-08!49
|ontology_enrichment_uberon_v019=UBERON:0000473;3.66e-66;8!UBERON:0003135;2.24e-48;11!UBERON:0000991;9.82e-26;21!UBERON:0003101;1.34e-24;22!UBERON:0000079;1.34e-24;22!UBERON:0000922;4.29e-12;49!UBERON:0002323;1.40e-11;45!UBERON:0003133;1.49e-09;44!UBERON:0002553;1.27e-07;52
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.66e-66,8;UBERON:0003135,2.24e-48,11;UBERON:0000991,9.82e-26,21;UBERON:0009196,9.82e-26,21;UBERON:0009117,9.82e-26,21;UBERON:0005564,9.82e-26,21;UBERON:0004176,1.34e-24,22;UBERON:0003101,1.34e-24,22;UBERON:0000079,1.34e-24,22;UBERON:0002323,4.14e-12,46;UBERON:0003133,1.25e-11,48;UBERON:0004458,2.10e-11,49;UBERON:0003886,2.12e-10,54;UBERON:0005156,1.45e-09,59;UBERON:0000990,1.45e-09,59;UBERON:0002553,2.88e-09,61
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.232387885739037,0.829288440122964,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85751472338282,0.126698501011437,15.4003132910392,3.74104367371785,3.95148067999833,2.50707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr12:4128088..4128115,+
|short_description=p@chr12:4128088..4128115,+
}}
}}

Latest revision as of 08:25, 24 July 2015

Short description:p@chr12:4128088..4128115, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr12:4128088..4128115, +
Coexpression cluster:C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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