FFCP PHASE1:Hg19::chr12:28004664..28004668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28004664..28004668,+ | |||
|coexpression_cluster_id=C695 | |coexpression_cluster_id=C695 | ||
|description=CAGE_peak_at_chr12:28004664..28004668,+ | |description=CAGE_peak_at_chr12:28004664..28004668,+ | ||
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|ontology_enrichment_celltype=CL:0002541!6.68e-60!3;CL:0002097!3.02e-11!2;CL:0002178!4.52e-08!3;CL:0000174!6.34e-08!3 | |ontology_enrichment_celltype=CL:0002541!6.68e-60!3;CL:0002097!3.02e-11!2;CL:0002178!4.52e-08!3;CL:0000174!6.34e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3!CL:0002541;3.66e-23;3 | |ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3!CL:0002541;3.66e-23;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3;CL:0002541,3.27e-23,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;6.18e-20;14 | |ontology_enrichment_disease_v019=DOID:3119;6.18e-20;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,6.48e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0000476!6.68e-60!3;UBERON:0000920!6.68e-60!3;UBERON:0003124!3.45e-26!7;UBERON:0005631!4.44e-23!14;UBERON:0000158!4.44e-23!14;UBERON:0000478!1.19e-13!24;UBERON:0004923!8.04e-09!57;UBERON:0002369!6.34e-08!3;UBERON:0001235!6.34e-08!3;UBERON:0006858!6.34e-08!3 | |ontology_enrichment_uberon=UBERON:0000476!6.68e-60!3;UBERON:0000920!6.68e-60!3;UBERON:0003124!3.45e-26!7;UBERON:0005631!4.44e-23!14;UBERON:0000158!4.44e-23!14;UBERON:0000478!1.19e-13!24;UBERON:0004923!8.04e-09!57;UBERON:0002369!6.34e-08!3;UBERON:0001235!6.34e-08!3;UBERON:0006858!6.34e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.66e-23;3!UBERON:0000920;3.66e-23;3!UBERON:0001052;9.45e-18;4!UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0004907;1.71e-14;5!UBERON:0005409;1.29e-12;22!UBERON:0005631;6.34e-08;10!UBERON:0000158;6.34e-08;10!UBERON:0004921;2.46e-07;33!UBERON:0000059;2.55e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0003124;3.66e-23;3!UBERON:0000920;3.66e-23;3!UBERON:0001052;9.45e-18;4!UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0004907;1.71e-14;5!UBERON:0005409;1.29e-12;22!UBERON:0005631;6.34e-08;10!UBERON:0000158;6.34e-08;10!UBERON:0004921;2.46e-07;33!UBERON:0000059;2.55e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.27e-23,3;UBERON:0001052,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0005409,2.77e-11,25;UBERON:0003124,8.99e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0000059,2.63e-07,11 | |||
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|short_description=p@chr12:28004664..28004668,+ | |short_description=p@chr12:28004664..28004668,+ | ||
}} | }} |
Latest revision as of 07:54, 24 July 2015
Short description: | p@chr12:28004664..28004668, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28004664..28004668, + |
Coexpression cluster: | C695_gastric_mesothelioma_amniotic_chorionic_Mast_tongue_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.62e-23 | 3 |
chorionic membrane mesenchymal stem cell | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.27e-23 | 3 |
rectum | 1.03e-17 | 4 |
lower digestive tract | 1.83e-14 | 5 |
gastrointestinal system | 2.77e-11 | 25 |
chorion | 8.99e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.48e-20 | 14 |