FFCP PHASE1:Hg19::chr12:24972758..24972767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:24972758..24972767,+ | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_at_chr12:24972758..24972767,+ | |description=CAGE_peak_at_chr12:24972758..24972767,+ | ||
|id=chr12:24972758..24972767,+ | |id=chr12:24972758..24972767,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.02e-19!24;CL:0000826!2.02e-19!24;CL:0000838!3.03e-09!52;CL:0000542!4.44e-09!53;CL:0000051!4.44e-09!53 | |ontology_enrichment_celltype=CL:0000945!2.02e-19!24;CL:0000826!2.02e-19!24;CL:0000838!3.03e-09!52;CL:0000542!4.44e-09!53;CL:0000051!4.44e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.86e-12;24!CL:0002092;5.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24;CL:0002092,5.73e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0004872;9.43e-11;7 | |||
|ontology_enrichment_disease=DOID:4960!7.48e-30!1;DOID:0070004!7.48e-30!1;DOID:630!2.37e-29!1;DOID:0050177!2.37e-29!1;DOID:0050427!2.37e-29!1;DOID:0060058!2.12e-12!10 | |ontology_enrichment_disease=DOID:4960!7.48e-30!1;DOID:0070004!7.48e-30!1;DOID:630!2.37e-29!1;DOID:0050177!2.37e-29!1;DOID:0050427!2.37e-29!1;DOID:0060058!2.12e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.23e-66;1!DOID:0070004;1.23e-66;1!DOID:0060058;2.72e-27;10!DOID:2531;3.66e-08;51!DOID:0060083;3.66e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.23e-66,1;DOID:0070004,1.23e-66,1;DOID:0060058,2.72e-27,10;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.18e-38!3;UBERON:0004854!2.18e-38!3;UBERON:0009034!2.18e-38!3;UBERON:0002095!2.18e-38!3;UBERON:0004782!2.18e-38!3;UBERON:0003281!2.18e-38!3;UBERON:0009664!2.18e-38!3;UBERON:0002296!2.18e-38!3;UBERON:0005602!2.18e-38!3;UBERON:0001179!2.18e-38!3;UBERON:0006293!2.18e-38!3;UBERON:0002372!4.20e-29!1;UBERON:0001961!4.20e-29!1;UBERON:0001744!4.20e-29!1;UBERON:0001735!4.20e-29!1;UBERON:0004177!4.02e-17!7;UBERON:0000945!4.07e-15!8;UBERON:0010039!4.07e-15!8;UBERON:0004457!2.03e-10!12;UBERON:0000042!2.03e-10!12;UBERON:0002075!2.95e-07!18 | |ontology_enrichment_uberon=UBERON:0002106!2.18e-38!3;UBERON:0004854!2.18e-38!3;UBERON:0009034!2.18e-38!3;UBERON:0002095!2.18e-38!3;UBERON:0004782!2.18e-38!3;UBERON:0003281!2.18e-38!3;UBERON:0009664!2.18e-38!3;UBERON:0002296!2.18e-38!3;UBERON:0005602!2.18e-38!3;UBERON:0001179!2.18e-38!3;UBERON:0006293!2.18e-38!3;UBERON:0002372!4.20e-29!1;UBERON:0001961!4.20e-29!1;UBERON:0001744!4.20e-29!1;UBERON:0001735!4.20e-29!1;UBERON:0004177!4.02e-17!7;UBERON:0000945!4.07e-15!8;UBERON:0010039!4.07e-15!8;UBERON:0004457!2.03e-10!12;UBERON:0000042!2.03e-10!12;UBERON:0002075!2.95e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.66e-23;3!UBERON:0004177;1.71e-14;5!UBERON:0005057;1.71e-14;5!UBERON:0002405;6.40e-11;27!UBERON:0002390;1.23e-08;32!UBERON:0002371;7.48e-07;12!UBERON:0002193;7.79e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.09e-23,3;UBERON:0004854,4.09e-23,3;UBERON:0009034,4.09e-23,3;UBERON:0002095,4.09e-23,3;UBERON:0004782,4.09e-23,3;UBERON:0003281,4.09e-23,3;UBERON:0009664,4.09e-23,3;UBERON:0002296,4.09e-23,3;UBERON:0005602,4.09e-23,3;UBERON:0001179,4.09e-23,3;UBERON:0006293,4.09e-23,3;UBERON:0004177,9.89e-11,7;UBERON:0005057,9.89e-11,7;UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8;UBERON:0004457,8.38e-07,12;UBERON:0000042,8.38e-07,12;UBERON:0003887,8.38e-07,12 | |||
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|short_description=p@chr12:24972758..24972767,+ | |short_description=p@chr12:24972758..24972767,+ | ||
}} | }} |
Latest revision as of 07:41, 24 July 2015
Short description: | p@chr12:24972758..24972767, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24972758..24972767, + |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
bone marrow cell | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.09e-23 | 3 |
gastrointestinal system mesentery | 4.09e-23 | 3 |
stomach region | 4.09e-23 | 3 |
mesentery | 4.09e-23 | 3 |
gastrointestinal system serosa | 4.09e-23 | 3 |
mesentery of stomach | 4.09e-23 | 3 |
gut mesentery | 4.09e-23 | 3 |
dorsal mesentery | 4.09e-23 | 3 |
dorsal mesogastrium | 4.09e-23 | 3 |
peritoneal cavity | 4.09e-23 | 3 |
spleen primordium | 4.09e-23 | 3 |
hemopoietic organ | 9.89e-11 | 7 |
immune organ | 9.89e-11 | 7 |
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
cavity lining | 8.38e-07 | 12 |
serous membrane | 8.38e-07 | 12 |
intraembryonic coelom | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.23e-66 | 1 |
myeloma | 1.23e-66 | 1 |
lymphoma | 2.72e-27 | 10 |
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |