FFCP PHASE1:Hg19::chr12:24862404..24862425,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:24862404..24862425,+
|short_description=p@chr12:24862404..24862425,+
|description=CAGE_peak_at_chr12:24862404..24862425,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:24862404..24862425,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:24862404..24862425,+ | |||
|id=chr12:24862404..24862425,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.68e-68!42;CL:0000860!5.45e-63!45;CL:0002194!1.43e-42!63;CL:0000576!1.43e-42!63;CL:0000040!1.43e-42!63;CL:0000559!1.43e-42!63;CL:0002009!4.18e-41!65;CL:0000766!1.83e-40!76;CL:0000839!8.40e-38!70;CL:0000557!3.39e-37!71;CL:0000738!9.94e-33!140;CL:0002087!2.38e-32!119;CL:0000988!5.25e-29!182;CL:0002031!1.41e-28!124;CL:0000763!1.30e-25!112;CL:0000049!1.30e-25!112;CL:0000037!2.38e-25!172;CL:0000566!2.38e-25!172;CL:0002032!3.85e-23!165;CL:0000837!3.85e-23!165;CL:0000080!3.60e-13!6;CL:0000134!4.16e-10!358;CL:0002320!9.04e-10!365;CL:0000219!1.39e-08!390;CL:0000034!2.07e-07!444;CL:0000048!3.67e-07!430;CL:0000767!4.83e-07!3;CL:0000723!5.84e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-69;33!CL:0002057;2.32e-69;33!CL:0000473;1.58e-47;39!CL:0000234;1.58e-47;39!CL:0000576;7.87e-36;48!CL:0000766;4.39e-25;69!CL:0002087;5.21e-15;104!CL:0000763;3.28e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.05e-72,42;CL:0002057,9.05e-72,42;CL:0000473,1.91e-62,48;CL:0000234,1.91e-62,48;CL:0002194,2.20e-49,59;CL:0000576,2.20e-49,59;CL:0000040,2.20e-49,59;CL:0000559,2.20e-49,59;CL:0002009,1.07e-47,61;CL:0000839,6.39e-44,66;CL:0000557,3.12e-43,67;CL:0000766,4.53e-40,72;CL:0000763,7.53e-26,108;CL:0000049,7.53e-26,108;CL:0002087,4.17e-24,115;CL:0002031,5.53e-23,120;CL:0000988,2.18e-20,177;CL:0000738,6.11e-20,136;CL:0002032,2.21e-16,161;CL:0000837,2.21e-16,161;CL:0000037,1.42e-15,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-51;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.62e-34!102;UBERON:0003061!7.62e-34!102;UBERON:0002371!2.03e-32!80;UBERON:0002193!2.84e-30!112;UBERON:0001474!8.77e-30!86;UBERON:0004765!1.49e-24!101;UBERON:0001434!1.49e-24!101;UBERON:0002405!6.82e-21!115;UBERON:0003081!8.78e-14!216;UBERON:0002204!1.16e-12!167;UBERON:0002384!2.61e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.68e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.26e-39,98;UBERON:0003061,3.26e-39,98;UBERON:0002371,7.76e-38,76;UBERON:0002193,2.49e-35,108;UBERON:0001474,6.90e-35,82;UBERON:0004765,1.47e-31,90;UBERON:0002405,1.86e-30,93;UBERON:0001434,3.89e-28,100;UBERON:0003081,2.28e-17,203;UBERON:0002204,1.10e-15,167;UBERON:0000926,5.33e-10,315;UBERON:0004120,5.33e-10,315;UBERON:0006603,5.33e-10,315;UBERON:0002331,3.50e-08,10;UBERON:0000358,3.50e-08,10;UBERON:0000307,3.50e-08,10;UBERON:0000091,3.50e-08,10;UBERON:0000087,3.50e-08,10;UBERON:0007010,3.50e-08,10;UBERON:0007806,3.50e-08,10;UBERON:0008780,3.50e-08,10;UBERON:0005728,3.50e-08,10 | |||
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|short_description=p@chr12:24862404..24862425,+ | |||
}} | }} |
Latest revision as of 07:40, 24 July 2015
Short description: | p@chr12:24862404..24862425, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24862404..24862425, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.05e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.05e-72 | 42 |
defensive cell | 1.91e-62 | 48 |
phagocyte | 1.91e-62 | 48 |
monopoietic cell | 2.20e-49 | 59 |
monocyte | 2.20e-49 | 59 |
monoblast | 2.20e-49 | 59 |
promonocyte | 2.20e-49 | 59 |
macrophage dendritic cell progenitor | 1.07e-47 | 61 |
myeloid lineage restricted progenitor cell | 6.39e-44 | 66 |
granulocyte monocyte progenitor cell | 3.12e-43 | 67 |
myeloid leukocyte | 4.53e-40 | 72 |
myeloid cell | 7.53e-26 | 108 |
common myeloid progenitor | 7.53e-26 | 108 |
nongranular leukocyte | 4.17e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 5.53e-23 | 120 |
hematopoietic cell | 2.18e-20 | 177 |
leukocyte | 6.11e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.21e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-16 | 161 |
hematopoietic stem cell | 1.42e-15 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.26e-39 | 98 |
blood island | 3.26e-39 | 98 |
bone marrow | 7.76e-38 | 76 |
hemolymphoid system | 2.49e-35 | 108 |
bone element | 6.90e-35 | 82 |
skeletal element | 1.47e-31 | 90 |
immune system | 1.86e-30 | 93 |
skeletal system | 3.89e-28 | 100 |
lateral plate mesoderm | 2.28e-17 | 203 |
musculoskeletal system | 1.10e-15 | 167 |
mesoderm | 5.33e-10 | 315 |
mesoderm-derived structure | 5.33e-10 | 315 |
presumptive mesoderm | 5.33e-10 | 315 |
umbilical cord | 3.50e-08 | 10 |
blastocyst | 3.50e-08 | 10 |
blastula | 3.50e-08 | 10 |
bilaminar disc | 3.50e-08 | 10 |
inner cell mass | 3.50e-08 | 10 |
cleaving embryo | 3.50e-08 | 10 |
connecting stalk | 3.50e-08 | 10 |
inner cell mass derived epiblast | 3.50e-08 | 10 |
extraembryonic mesoderm | 3.50e-08 | 10 |