FFCP PHASE1:Hg19::chr12:220917..220937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=78bp_to_ENST00000540226_5end | |association_with_transcript=78bp_to_ENST00000540226_5end | ||
|cluster_id=chr12:220917..220937,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_1_at_ENST00000540226_5end | |description=CAGE_peak_1_at_ENST00000540226_5end | ||
|id=chr12:220917..220937,- | |id=chr12:220917..220937,- | ||
|ontology_enrichment_celltype=CL:0000738!4.62e-39!140;CL:0000988!1.83e-33!182;CL:0000037!4.47e-30!172;CL:0000566!4.47e-30!172;CL:0002087!9.53e-29!119;CL:0002057!3.77e-26!42;CL:0002032!8.72e-25!165;CL:0000837!8.72e-25!165;CL:0000860!4.19e-24!45;CL:0002031!1.29e-23!124;CL:0000766!2.69e-23!76;CL:0002194!9.97e-22!63;CL:0000576!9.97e-22!63;CL:0000040!9.97e-22!63;CL:0000559!9.97e-22!63;CL:0002009!6.56e-21!65;CL:0000839!4.56e-19!70;CL:0000557!9.93e-19!71;CL:0000763!1.17e-18!112;CL:0000049!1.17e-18!112;CL:0000080!6.35e-17!6;CL:0002393!1.07e-15!9;CL:0002397!1.07e-15!9;CL:0000767!1.49e-12!3;CL:0000451!1.97e-12!10;CL:0000784!3.78e-12!3;CL:0000134!1.36e-09!358;CL:0002320!3.14e-09!365;CL:0000945!1.86e-08!24;CL:0000826!1.86e-08!24;CL:0000219!5.85e-08!390;CL:0000453!6.32e-08!5;CL:0000990!3.30e-07!8;CL:0000048!5.00e-07!430;CL:0000723!8.39e-07!436 | |ontology_enrichment_celltype=CL:0000738!4.62e-39!140;CL:0000988!1.83e-33!182;CL:0000037!4.47e-30!172;CL:0000566!4.47e-30!172;CL:0002087!9.53e-29!119;CL:0002057!3.77e-26!42;CL:0002032!8.72e-25!165;CL:0000837!8.72e-25!165;CL:0000860!4.19e-24!45;CL:0002031!1.29e-23!124;CL:0000766!2.69e-23!76;CL:0002194!9.97e-22!63;CL:0000576!9.97e-22!63;CL:0000040!9.97e-22!63;CL:0000559!9.97e-22!63;CL:0002009!6.56e-21!65;CL:0000839!4.56e-19!70;CL:0000557!9.93e-19!71;CL:0000763!1.17e-18!112;CL:0000049!1.17e-18!112;CL:0000080!6.35e-17!6;CL:0002393!1.07e-15!9;CL:0002397!1.07e-15!9;CL:0000767!1.49e-12!3;CL:0000451!1.97e-12!10;CL:0000784!3.78e-12!3;CL:0000134!1.36e-09!358;CL:0002320!3.14e-09!365;CL:0000945!1.86e-08!24;CL:0000826!1.86e-08!24;CL:0000219!5.85e-08!390;CL:0000453!6.32e-08!5;CL:0000990!3.30e-07!8;CL:0000048!5.00e-07!430;CL:0000723!8.39e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.82e-34;6!CL:0002397;2.82e-34;6!CL:0000453;1.87e-15;5!CL:0000576;9.80e-15;48!CL:0000766;1.79e-13;69!CL:0000451;3.06e-12;10!CL:0000767;7.77e-12;3!CL:0000860;1.22e-10;33!CL:0002057;1.22e-10;33!CL:0000473;2.11e-09;39!CL:0000234;2.11e-09;39!CL:0000990;7.97e-09;8!CL:0000081;2.18e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.01e-32,9;CL:0002397,2.01e-32,9;CL:0000860,5.10e-31,42;CL:0002057,5.10e-31,42;CL:0000473,7.17e-27,48;CL:0000234,7.17e-27,48;CL:0000766,8.36e-23,72;CL:0000763,1.78e-21,108;CL:0000049,1.78e-21,108;CL:0000988,2.64e-21,177;CL:0002194,4.65e-21,59;CL:0000576,4.65e-21,59;CL:0000040,4.65e-21,59;CL:0000559,4.65e-21,59;CL:0000738,7.19e-21,136;CL:0002009,2.62e-20,61;CL:0000839,1.26e-18,66;CL:0000557,2.54e-18,67;CL:0000037,2.75e-16,168;CL:0000453,1.35e-15,5;CL:0002032,3.00e-15,161;CL:0000837,3.00e-15,161;CL:0000451,2.68e-12,10;CL:0000767,7.78e-12,3;CL:0002087,1.40e-11,115;CL:0002031,5.33e-11,120;CL:0000990,6.68e-09,8;CL:0000081,2.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-21;42!CL:0000049;2.83e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.44e-21!102;UBERON:0003061!4.44e-21!102;UBERON:0002193!1.28e-18!112;UBERON:0002371!4.52e-16!80;UBERON:0001474!1.31e-14!86;UBERON:0004765!1.02e-11!101;UBERON:0001434!1.02e-11!101;UBERON:0002405!8.03e-11!115;UBERON:0002384!9.75e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.01e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.32e-19,98;UBERON:0003061,8.32e-19,98;UBERON:0002193,7.99e-17,108;UBERON:0002371,6.40e-16,76;UBERON:0001474,1.31e-14,82;UBERON:0004765,3.97e-13,90;UBERON:0002405,1.23e-12,93;UBERON:0001434,1.32e-11,100;UBERON:0002331,2.01e-08,10;UBERON:0000358,2.01e-08,10;UBERON:0000307,2.01e-08,10;UBERON:0000091,2.01e-08,10;UBERON:0000087,2.01e-08,10;UBERON:0007010,2.01e-08,10;UBERON:0007806,2.01e-08,10;UBERON:0008780,2.01e-08,10;UBERON:0005728,2.01e-08,10;UBERON:0003081,1.15e-07,203 | |||
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|short_description=p1@ENST00000540226 | |short_description=p1@ENST00000540226 | ||
}} | }} |
Latest revision as of 07:33, 24 July 2015
Short description: | p1@ENST00000540226 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000540226_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 78bp_to_ENST00000540226_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.01e-32 | 9 |
CD14-positive, CD16-positive monocyte | 2.01e-32 | 9 |
classical monocyte | 5.10e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-31 | 42 |
defensive cell | 7.17e-27 | 48 |
phagocyte | 7.17e-27 | 48 |
myeloid leukocyte | 8.36e-23 | 72 |
myeloid cell | 1.78e-21 | 108 |
common myeloid progenitor | 1.78e-21 | 108 |
hematopoietic cell | 2.64e-21 | 177 |
monopoietic cell | 4.65e-21 | 59 |
monocyte | 4.65e-21 | 59 |
monoblast | 4.65e-21 | 59 |
promonocyte | 4.65e-21 | 59 |
leukocyte | 7.19e-21 | 136 |
macrophage dendritic cell progenitor | 2.62e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-18 | 66 |
granulocyte monocyte progenitor cell | 2.54e-18 | 67 |
hematopoietic stem cell | 2.75e-16 | 168 |
Langerhans cell | 1.35e-15 | 5 |
hematopoietic oligopotent progenitor cell | 3.00e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.00e-15 | 161 |
dendritic cell | 2.68e-12 | 10 |
basophil | 7.78e-12 | 3 |
nongranular leukocyte | 1.40e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.33e-11 | 120 |
conventional dendritic cell | 6.68e-09 | 8 |
blood cell | 2.18e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.32e-19 | 98 |
blood island | 8.32e-19 | 98 |
hemolymphoid system | 7.99e-17 | 108 |
bone marrow | 6.40e-16 | 76 |
bone element | 1.31e-14 | 82 |
skeletal element | 3.97e-13 | 90 |
immune system | 1.23e-12 | 93 |
skeletal system | 1.32e-11 | 100 |
umbilical cord | 2.01e-08 | 10 |
blastocyst | 2.01e-08 | 10 |
blastula | 2.01e-08 | 10 |
bilaminar disc | 2.01e-08 | 10 |
inner cell mass | 2.01e-08 | 10 |
cleaving embryo | 2.01e-08 | 10 |
connecting stalk | 2.01e-08 | 10 |
inner cell mass derived epiblast | 2.01e-08 | 10 |
extraembryonic mesoderm | 2.01e-08 | 10 |
lateral plate mesoderm | 1.15e-07 | 203 |