FFCP PHASE1:Hg19::chr12:2163623..2163634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2163623..2163634,+ | |||
|description=CAGE_peak_at_chr12:2163623..2163634,+ | |description=CAGE_peak_at_chr12:2163623..2163634,+ | ||
|id=chr12:2163623..2163634,+ | |id=chr12:2163623..2163634,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;2.86e-53;3!CL:1000428;2.86e-53;3!CL:0002559;1.69e-32;5!CL:0002615;1.60e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.87e-53,3;CL:1000428,2.87e-53,3;CL:0002559,1.70e-32,5;CL:0002615,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.96e-38!57;UBERON:0005068!1.96e-38!57;UBERON:0006241!1.96e-38!57;UBERON:0007135!1.96e-38!57;UBERON:0002616!7.41e-37!59;UBERON:0002780!3.17e-36!41;UBERON:0001890!3.17e-36!41;UBERON:0006240!3.17e-36!41;UBERON:0003080!3.26e-35!42;UBERON:0000955!1.16e-34!69;UBERON:0006238!1.16e-34!69;UBERON:0001893!1.74e-34!34;UBERON:0001869!1.09e-33!32;UBERON:0002619!2.22e-33!22;UBERON:0001950!9.54e-33!20;UBERON:0002791!2.62e-32!33;UBERON:0005743!5.27e-32!86;UBERON:0001017!5.88e-32!82;UBERON:0002020!3.33e-31!34;UBERON:0003528!3.33e-31!34;UBERON:0003075!3.82e-30!86;UBERON:0007284!3.82e-30!86;UBERON:0000956!5.75e-29!25;UBERON:0000203!5.75e-29!25;UBERON:0002346!2.16e-28!90;UBERON:0007023!2.89e-28!115;UBERON:0000073!4.18e-28!94;UBERON:0001016!4.18e-28!94;UBERON:0003056!3.48e-24!61;UBERON:0000033!1.67e-19!123;UBERON:0000153!3.60e-18!129;UBERON:0007811!3.60e-18!129;UBERON:0004121!9.22e-16!169;UBERON:0000924!3.61e-15!173;UBERON:0006601!3.61e-15!173;UBERON:0001871!3.12e-13!7;UBERON:0000200!4.03e-12!6;UBERON:0001872!9.20e-10!5;UBERON:0002021!1.20e-09!5;UBERON:0002771!1.26e-09!3;UBERON:0000064!1.41e-08!219;UBERON:0000025!1.89e-08!194;UBERON:0000475!2.23e-08!365;UBERON:0004733!3.27e-07!12;UBERON:0002028!3.27e-07!12;UBERON:0007277!3.27e-07!12;UBERON:0002680!4.64e-07!9;UBERON:0001895!4.64e-07!9;UBERON:0010092!4.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.86e-53;3!UBERON:0001992;2.86e-53;3!UBERON:0002022;1.48e-40;1!UBERON:0002073;1.69e-32;5!UBERON:0001876;4.66e-21;2!UBERON:0002067;1.35e-18;9!UBERON:0001003;1.34e-11;15!UBERON:0007376;1.34e-11;15!UBERON:0000349;2.97e-09;5!UBERON:0001950;1.42e-08;20!UBERON:0003688;6.33e-08;6!UBERON:0002358;6.33e-08;6!UBERON:0003684;6.33e-08;6!UBERON:0001178;6.33e-08;6!UBERON:0002619;6.52e-08;22!UBERON:0000956;4.15e-07;25!UBERON:0000203;4.15e-07;25!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.87e-53,3;UBERON:0001992,2.87e-53,3;UBERON:0002022,1.48e-40,1;UBERON:0002073,1.70e-32,5;UBERON:0005086,1.70e-32,5;UBERON:0001876,3.11e-21,2;UBERON:0002067,1.35e-18,9;UBERON:0004016,1.35e-18,9;UBERON:0010083,1.35e-18,9;UBERON:0001003,1.34e-11,15;UBERON:0007376,1.34e-11,15;UBERON:0007383,1.34e-11,15;UBERON:0000349,2.53e-09,5;UBERON:0001950,1.32e-08,20;UBERON:0002619,6.08e-08,22;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0000956,3.90e-07,25;UBERON:0000203,3.90e-07,25;UBERON:0001871,5.08e-07,6 | |||
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|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40669416410513,0,0,0,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.732157589411779,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.798169295285756,0.205116364240755,0.252071696221718,0.96820153449905,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.337687923091973,0,0.826747186004736,0.507326481551255,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:2163623..2163634,+ | |short_description=p@chr12:2163623..2163634,+ | ||
}} | }} |
Latest revision as of 07:30, 24 July 2015
Short description: | p@chr12:2163623..2163634, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2163623..2163634, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.87e-53 | 3 |
stem cell of epidermis | 2.87e-53 | 3 |
hair follicle cell | 1.70e-32 | 5 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.87e-53 | 3 |
papillary layer of dermis | 2.87e-53 | 3 |
insula | 1.48e-40 | 1 |
hair follicle | 1.70e-32 | 5 |
hair follicle placode | 1.70e-32 | 5 |
amygdala | 3.11e-21 | 2 |
dermis | 1.35e-18 | 9 |
dermatome | 1.35e-18 | 9 |
future dermis | 1.35e-18 | 9 |
skin epidermis | 1.34e-11 | 15 |
outer epithelium | 1.34e-11 | 15 |
enveloping layer of ectoderm | 1.34e-11 | 15 |
limbic system | 2.53e-09 | 5 |
neocortex | 1.32e-08 | 20 |
regional part of cerebral cortex | 6.08e-08 | 22 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
cerebral cortex | 3.90e-07 | 25 |
pallium | 3.90e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |