FFCP PHASE1:Hg19::chr12:21298432..21298436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:21298432..21298436,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:21298432..21298436,+ | |description=CAGE_peak_at_chr12:21298432..21298436,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!7.19e-08!4 | |ontology_enrichment_celltype=CL:0002563!7.19e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.21e-15;2!CL:0000182;1.81e-10;12 | |ontology_enrichment_celltype_v019=CL:0000047;2.21e-15;2!CL:0000182;1.81e-10;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-10,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4235!1.71e-08!1;DOID:3119!2.43e-08!14 | |ontology_enrichment_disease=DOID:4235!1.71e-08!1;DOID:3119!2.43e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:4929;2.21e-15;2 | |ontology_enrichment_disease_v019=DOID:4929;2.21e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0004913!7.01e-09!1;UBERON:0003703!7.01e-09!1;UBERON:0001174!7.01e-09!1;UBERON:0004914!7.01e-09!1;UBERON:0001242!7.19e-08!4;UBERON:0001262!7.19e-08!4;UBERON:0004786!7.19e-08!4;UBERON:0004808!7.19e-08!4;UBERON:0001277!7.19e-08!4;UBERON:0007499!3.29e-07!25;UBERON:0009856!6.38e-07!26 | |ontology_enrichment_uberon=UBERON:0004913!7.01e-09!1;UBERON:0003703!7.01e-09!1;UBERON:0001174!7.01e-09!1;UBERON:0004914!7.01e-09!1;UBERON:0001242!7.19e-08!4;UBERON:0001262!7.19e-08!4;UBERON:0004786!7.19e-08!4;UBERON:0004808!7.19e-08!4;UBERON:0001277!7.19e-08!4;UBERON:0007499!3.29e-07!25;UBERON:0009856!6.38e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.73e-29;1!UBERON:0003703;2.73e-29;1!UBERON:0001174;2.73e-29;1!UBERON:0004914;2.73e-29;1!UBERON:0002423;6.47e-11;25!UBERON:0002114;1.04e-10;2!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4!UBERON:0002107;5.92e-07;19!UBERON:0006925;5.92e-07;19!UBERON:0002108;6.21e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004913;2.73e-29;1!UBERON:0003703;2.73e-29;1!UBERON:0001174;2.73e-29;1!UBERON:0004914;2.73e-29;1!UBERON:0002423;6.47e-11;25!UBERON:0002114;1.04e-10;2!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4!UBERON:0002107;5.92e-07;19!UBERON:0006925;5.92e-07;19!UBERON:0002108;6.21e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.78e-29,1;UBERON:0003703,1.78e-29,1;UBERON:0001174,1.78e-29,1;UBERON:0004914,1.78e-29,1;UBERON:0008835,2.54e-12,22;UBERON:0003894,2.54e-12,22;UBERON:0009854,8.10e-12,23;UBERON:0007499,6.26e-11,25;UBERON:0009497,6.26e-11,25;UBERON:0000015,6.26e-11,25;UBERON:0002423,6.26e-11,25;UBERON:0006235,6.26e-11,25;UBERON:0004161,6.26e-11,25;UBERON:0002114,8.99e-11,2;UBERON:0009856,1.55e-10,26;UBERON:0002108,5.70e-07,4;UBERON:0002107,6.01e-07,19;UBERON:0006925,6.01e-07,19;UBERON:0008836,6.01e-07,19 | |||
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|short_description=p@chr12:21298432..21298436,+ | |short_description=p@chr12:21298432..21298436,+ | ||
}} | }} |
Latest revision as of 07:29, 24 July 2015
Short description: | p@chr12:21298432..21298436, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:21298432..21298436, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.85e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.78e-29 | 1 |
extrahepatic bile duct | 1.78e-29 | 1 |
common bile duct | 1.78e-29 | 1 |
duodenal papilla | 1.78e-29 | 1 |
hepatic diverticulum | 2.54e-12 | 22 |
liver primordium | 2.54e-12 | 22 |
digestive tract diverticulum | 8.10e-12 | 23 |
epithelial sac | 6.26e-11 | 25 |
epithelium of foregut-midgut junction | 6.26e-11 | 25 |
anatomical boundary | 6.26e-11 | 25 |
hepatobiliary system | 6.26e-11 | 25 |
foregut-midgut junction | 6.26e-11 | 25 |
septum transversum | 6.26e-11 | 25 |
duodenum | 8.99e-11 | 2 |
sac | 1.55e-10 | 26 |
small intestine | 5.70e-07 | 4 |
liver | 6.01e-07 | 19 |
digestive gland | 6.01e-07 | 19 |
liver bud | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.78e-15 | 2 |