FFCP PHASE1:Hg19::chr12:19460588..19460600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:19460588..19460600,+ | |||
|description=CAGE_peak_at_chr12:19460588..19460600,+ | |description=CAGE_peak_at_chr12:19460588..19460600,+ | ||
|id=chr12:19460588..19460600,+ | |id=chr12:19460588..19460600,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.33e-08!106;DOID:0050687!1.13e-07!143 | |ontology_enrichment_disease=DOID:305!8.33e-08!106;DOID:0050687!1.13e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1909;8.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-23!57;UBERON:0005068!1.06e-23!57;UBERON:0006241!1.06e-23!57;UBERON:0007135!1.06e-23!57;UBERON:0001017!9.32e-23!82;UBERON:0005743!3.67e-22!86;UBERON:0002020!2.03e-20!34;UBERON:0003528!2.03e-20!34;UBERON:0001893!7.85e-20!34;UBERON:0002791!3.40e-19!33;UBERON:0000955!8.92e-19!69;UBERON:0006238!8.92e-19!69;UBERON:0000073!1.51e-18!94;UBERON:0001016!1.51e-18!94;UBERON:0002346!1.92e-18!90;UBERON:0001869!3.48e-18!32;UBERON:0002780!3.79e-18!41;UBERON:0001890!3.79e-18!41;UBERON:0006240!3.79e-18!41;UBERON:0007023!3.95e-18!115;UBERON:0002616!6.17e-18!59;UBERON:0003075!6.89e-18!86;UBERON:0007284!6.89e-18!86;UBERON:0003080!1.72e-17!42;UBERON:0002619!4.77e-16!22;UBERON:0001950!6.79e-16!20;UBERON:0000956!1.88e-13!25;UBERON:0000203!1.88e-13!25;UBERON:0003056!4.62e-13!61;UBERON:0000153!3.16e-11!129;UBERON:0007811!3.16e-11!129;UBERON:0000924!5.66e-11!173;UBERON:0006601!5.66e-11!173;UBERON:0000033!1.65e-10!123;UBERON:0004121!1.89e-10!169;UBERON:0002420!5.07e-09!9;UBERON:0007245!5.07e-09!9;UBERON:0010009!5.07e-09!9;UBERON:0010011!5.07e-09!9;UBERON:0000454!5.07e-09!9;UBERON:0002308!9.64e-09!9;UBERON:0000125!9.64e-09!9;UBERON:0001871!4.29e-08!7;UBERON:0002298!1.90e-07!8;UBERON:0003076!2.02e-07!15;UBERON:0003057!2.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.37e-44;22!UBERON:0001950;3.24e-39;20!UBERON:0000956;7.32e-39;25!UBERON:0000203;7.32e-39;25!UBERON:0002791;4.29e-38;32!UBERON:0001869;7.05e-38;32!UBERON:0003528;9.30e-36;34!UBERON:0002020;9.30e-36;34!UBERON:0001893;1.05e-33;34!UBERON:0002780;2.49e-31;41!UBERON:0001890;2.49e-31;41!UBERON:0002021;1.08e-19;5!UBERON:0001872;1.91e-19;5!UBERON:0000073;2.22e-19;53!UBERON:0002616;2.22e-19;53!UBERON:0000955;1.21e-15;68!UBERON:0005383;6.08e-15;3!UBERON:0005382;6.08e-15;3!UBERON:0001016;1.48e-12;83!UBERON:0001017;2.00e-12;75!UBERON:0001874;7.74e-12;1!UBERON:0003112;7.74e-12;1!UBERON:0011158;7.74e-12;1!UBERON:0003128;7.74e-12;1!UBERON:0001703;7.74e-12;1!UBERON:0002241;7.74e-12;1!UBERON:0000369;1.91e-11;4!UBERON:0002435;1.91e-11;4!UBERON:0000204;1.91e-11;4!UBERON:0002420;4.52e-11;9!UBERON:0007245;4.52e-11;9!UBERON:0010009;4.52e-11;9!UBERON:0010011;4.52e-11;9!UBERON:0000454;4.52e-11;9!UBERON:0000349;2.46e-09;5!UBERON:0000200;6.37e-08;6!UBERON:0011216;5.92e-07;132!UBERON:0001871;6.57e-07;6!UBERON:0009663;6.57e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.77e-44,22;UBERON:0002791,1.42e-43,32;UBERON:0001869,1.42e-43,32;UBERON:0003528,5.40e-41,34;UBERON:0002020,5.40e-41,34;UBERON:0001893,5.40e-41,34;UBERON:0002780,5.38e-40,41;UBERON:0001890,5.38e-40,41;UBERON:0003080,5.38e-40,41;UBERON:0006240,5.38e-40,41;UBERON:0001950,5.36e-39,20;UBERON:0000956,1.35e-38,25;UBERON:0000203,1.35e-38,25;UBERON:0000955,1.80e-31,68;UBERON:0006238,1.80e-31,68;UBERON:0003056,5.92e-31,61;UBERON:0000073,1.02e-30,53;UBERON:0002616,1.02e-30,53;UBERON:0001049,5.25e-29,56;UBERON:0005068,5.25e-29,56;UBERON:0006241,5.25e-29,56;UBERON:0007135,5.25e-29,56;UBERON:0001017,3.22e-26,81;UBERON:0001016,1.89e-23,89;UBERON:0003075,1.26e-22,82;UBERON:0007284,1.26e-22,82;UBERON:0002346,1.70e-21,86;UBERON:0010371,2.69e-20,104;UBERON:0002021,1.40e-19,5;UBERON:0001872,2.47e-19,5;UBERON:0010314,1.72e-15,132;UBERON:0005383,6.54e-15,3;UBERON:0005382,6.54e-15,3;UBERON:0004121,3.49e-13,171;UBERON:0000924,3.49e-13,171;UBERON:0006601,3.49e-13,171;UBERON:0001874,3.65e-12,1;UBERON:0003112,1.32e-11,1;UBERON:0011158,1.32e-11,1;UBERON:0003128,1.32e-11,1;UBERON:0001703,1.32e-11,1;UBERON:0002241,1.32e-11,1;UBERON:0004761,1.32e-11,1;UBERON:0009617,1.32e-11,1;UBERON:0000369,2.02e-11,4;UBERON:0002435,2.02e-11,4;UBERON:0000204,2.02e-11,4;UBERON:0010082,2.02e-11,4;UBERON:0002420,5.77e-11,9;UBERON:0007245,5.77e-11,9;UBERON:0010009,5.77e-11,9;UBERON:0010011,5.77e-11,9;UBERON:0000454,5.77e-11,9;UBERON:0011216,5.95e-11,223;UBERON:0007023,1.58e-09,114;UBERON:0000349,3.74e-09,5;UBERON:0000025,1.61e-08,192;UBERON:0000200,5.74e-08,6;UBERON:0009663,6.78e-07,7;UBERON:0001871,7.41e-07,6 | |||
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| ||
|short_description=p@chr12:19460588..19460600,+ | |short_description=p@chr12:19460588..19460600,+ | ||
}} | }} |
Latest revision as of 07:23, 24 July 2015
Short description: | p@chr12:19460588..19460600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:19460588..19460600, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 8.93e-07 | 2 |