FFCP PHASE1:Hg19::chr12:1919491..1919507,+: Difference between revisions
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|id=chr12:1919491..1919507,+
|short_description=p@chr12:1919491..1919507,+
|description=CAGE_peak_at_chr12:1919491..1919507,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:1919491..1919507,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:1919491..1919507,+ | |||
|id=chr12:1919491..1919507,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.83e-67!42;CL:0000860!3.74e-62!45;CL:0002194!1.99e-41!63;CL:0000576!1.99e-41!63;CL:0000040!1.99e-41!63;CL:0000559!1.99e-41!63;CL:0000766!5.45e-41!76;CL:0002009!6.11e-40!65;CL:0000839!2.54e-39!70;CL:0000557!1.15e-38!71;CL:0000763!2.89e-33!112;CL:0000049!2.89e-33!112;CL:0002087!8.42e-22!119;CL:0000738!1.09e-21!140;CL:0000037!2.16e-21!172;CL:0000566!2.16e-21!172;CL:0002032!2.77e-21!165;CL:0000837!2.77e-21!165;CL:0002031!1.22e-20!124;CL:0000988!1.02e-19!182;CL:0000134!1.03e-08!358;CL:0002320!2.31e-08!365;CL:0000219!9.61e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-52;33!CL:0002057;4.35e-52;33!CL:0000473;3.87e-34;39!CL:0000234;3.87e-34;39!CL:0000576;3.02e-23;48!CL:0000766;9.09e-18;69!CL:0002379;2.71e-10;1!CL:0000763;1.20e-09;100!CL:0002087;5.36e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.73e-50,42;CL:0002057,2.73e-50,42;CL:0000473,1.10e-43,48;CL:0000234,1.10e-43,48;CL:0002194,1.98e-34,59;CL:0000576,1.98e-34,59;CL:0000040,1.98e-34,59;CL:0000559,1.98e-34,59;CL:0002009,3.10e-33,61;CL:0000839,1.47e-30,66;CL:0000557,4.52e-30,67;CL:0000766,7.87e-28,72;CL:0000763,3.44e-20,108;CL:0000049,3.44e-20,108;CL:0002087,6.99e-19,115;CL:0002031,5.54e-18,120;CL:0000738,1.51e-15,136;CL:0002032,2.01e-14,161;CL:0000837,2.01e-14,161;CL:0000037,1.07e-13,168;CL:0000988,7.49e-13,177;CL:0002379,3.10e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-35;42!CL:0000049;7.12e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.71e-10;1!DOID:3565;2.71e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.10e-10,1;DOID:3565,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.68e-33!80;UBERON:0001474!1.18e-30!86;UBERON:0002390!1.54e-26!102;UBERON:0003061!1.54e-26!102;UBERON:0004765!5.23e-25!101;UBERON:0001434!5.23e-25!101;UBERON:0002405!2.58e-24!115;UBERON:0002193!1.72e-23!112;UBERON:0002204!3.08e-12!167;UBERON:0003081!1.28e-08!216;UBERON:0002384!1.56e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.91e-10;1!UBERON:0003703;6.91e-10;1!UBERON:0001174;6.91e-10;1!UBERON:0004914;6.91e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.02e-26,76;UBERON:0001474,3.71e-24,82;UBERON:0004765,8.49e-22,90;UBERON:0002405,5.13e-21,93;UBERON:0002390,8.09e-20,98;UBERON:0003061,8.09e-20,98;UBERON:0001434,2.26e-19,100;UBERON:0002193,9.44e-18,108;UBERON:0002204,1.50e-10,167;UBERON:0004913,6.33e-10,1;UBERON:0003703,6.33e-10,1;UBERON:0001174,6.33e-10,1;UBERON:0004914,6.33e-10,1;UBERON:0003081,3.40e-08,203 | |||
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| ||
|short_description=p@chr12:1919491..1919507,+ | |||
}} | }} |
Latest revision as of 07:21, 24 July 2015
Short description: | p@chr12:1919491..1919507, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1919491..1919507, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.73e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-50 | 42 |
defensive cell | 1.10e-43 | 48 |
phagocyte | 1.10e-43 | 48 |
monopoietic cell | 1.98e-34 | 59 |
monocyte | 1.98e-34 | 59 |
monoblast | 1.98e-34 | 59 |
promonocyte | 1.98e-34 | 59 |
macrophage dendritic cell progenitor | 3.10e-33 | 61 |
myeloid lineage restricted progenitor cell | 1.47e-30 | 66 |
granulocyte monocyte progenitor cell | 4.52e-30 | 67 |
myeloid leukocyte | 7.87e-28 | 72 |
myeloid cell | 3.44e-20 | 108 |
common myeloid progenitor | 3.44e-20 | 108 |
nongranular leukocyte | 6.99e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.54e-18 | 120 |
leukocyte | 1.51e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.01e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-14 | 161 |
hematopoietic stem cell | 1.07e-13 | 168 |
hematopoietic cell | 7.49e-13 | 177 |
meningothelial cell | 3.10e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.02e-26 | 76 |
bone element | 3.71e-24 | 82 |
skeletal element | 8.49e-22 | 90 |
immune system | 5.13e-21 | 93 |
hematopoietic system | 8.09e-20 | 98 |
blood island | 8.09e-20 | 98 |
skeletal system | 2.26e-19 | 100 |
hemolymphoid system | 9.44e-18 | 108 |
musculoskeletal system | 1.50e-10 | 167 |
hepatopancreatic ampulla | 6.33e-10 | 1 |
extrahepatic bile duct | 6.33e-10 | 1 |
common bile duct | 6.33e-10 | 1 |
duodenal papilla | 6.33e-10 | 1 |
lateral plate mesoderm | 3.40e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.10e-10 | 1 |
meningioma | 3.10e-10 | 1 |