FFCP PHASE1:Hg19::chr12:18395878..18395884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:18395878..18395884,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:18395878..18395884,+ | |description=CAGE_peak_at_chr12:18395878..18395884,+ | ||
|id=chr12:18395878..18395884,+ | |id=chr12:18395878..18395884,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.64e-16!12;CL:0000417!3.64e-16!12;CL:0000668!3.64e-16!12;CL:0000414!3.64e-16!12;CL:0000412!3.64e-16!12;CL:0000182!3.64e-16!12;CL:1000415!3.48e-07!2 | |ontology_enrichment_celltype=CL:0000181!3.64e-16!12;CL:0000417!3.64e-16!12;CL:0000668!3.64e-16!12;CL:0000414!3.64e-16!12;CL:0000412!3.64e-16!12;CL:0000182!3.64e-16!12;CL:1000415!3.48e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.29e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.30e-22,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.74e-07!2;DOID:4074!4.42e-07!2;DOID:4905!4.42e-07!2;DOID:3498!4.42e-07!2 | |ontology_enrichment_disease=DOID:3493!2.74e-07!2;DOID:4074!4.42e-07!2;DOID:4905!4.42e-07!2;DOID:3498!4.42e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.16e-22!25;UBERON:0000015!1.16e-22!25;UBERON:0002423!1.16e-22!25;UBERON:0006235!1.16e-22!25;UBERON:0004161!1.16e-22!25;UBERON:0002110!1.37e-16!3;UBERON:0006242!1.37e-16!3;UBERON:0005172!2.68e-16!55;UBERON:0005173!2.68e-16!55;UBERON:0002107!1.08e-15!19;UBERON:0006925!1.08e-15!19;UBERON:0008836!1.08e-15!19;UBERON:0002417!1.36e-14!61;UBERON:0000916!1.36e-14!61;UBERON:0008835!1.51e-13!22;UBERON:0003894!1.51e-13!22;UBERON:0009854!5.88e-13!23;UBERON:0001301!6.06e-13!1;UBERON:0007499!6.48e-12!25;UBERON:0005177!7.89e-12!107;UBERON:0005057!1.87e-11!26;UBERON:0009856!1.87e-11!26;UBERON:0003929!3.55e-10!54;UBERON:0000466!8.10e-10!126;UBERON:0002365!1.37e-09!31;UBERON:0002330!1.37e-09!31;UBERON:0000949!3.64e-09!45;UBERON:0009569!3.92e-09!113;UBERON:0002368!1.76e-08!35;UBERON:0005911!2.23e-08!82;UBERON:0002294!1.25e-07!7;UBERON:0001173!1.25e-07!7;UBERON:0004912!1.25e-07!7 | |ontology_enrichment_uberon=UBERON:0009497!1.16e-22!25;UBERON:0000015!1.16e-22!25;UBERON:0002423!1.16e-22!25;UBERON:0006235!1.16e-22!25;UBERON:0004161!1.16e-22!25;UBERON:0002110!1.37e-16!3;UBERON:0006242!1.37e-16!3;UBERON:0005172!2.68e-16!55;UBERON:0005173!2.68e-16!55;UBERON:0002107!1.08e-15!19;UBERON:0006925!1.08e-15!19;UBERON:0008836!1.08e-15!19;UBERON:0002417!1.36e-14!61;UBERON:0000916!1.36e-14!61;UBERON:0008835!1.51e-13!22;UBERON:0003894!1.51e-13!22;UBERON:0009854!5.88e-13!23;UBERON:0001301!6.06e-13!1;UBERON:0007499!6.48e-12!25;UBERON:0005177!7.89e-12!107;UBERON:0005057!1.87e-11!26;UBERON:0009856!1.87e-11!26;UBERON:0003929!3.55e-10!54;UBERON:0000466!8.10e-10!126;UBERON:0002365!1.37e-09!31;UBERON:0002330!1.37e-09!31;UBERON:0000949!3.64e-09!45;UBERON:0009569!3.92e-09!113;UBERON:0002368!1.76e-08!35;UBERON:0005911!2.23e-08!82;UBERON:0002294!1.25e-07!7;UBERON:0001173!1.25e-07!7;UBERON:0004912!1.25e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.76e-24;19!UBERON:0006925;2.76e-24;19!UBERON:0002423;1.31e-18;25!UBERON:0002365;1.32e-15;31!UBERON:0002330;1.32e-15;31!UBERON:0002368;1.37e-12;33!UBERON:0000949;1.35e-10;43!UBERON:0005172;7.42e-08;52!UBERON:0005173;7.42e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-24,19;UBERON:0006925,2.60e-24,19;UBERON:0008836,2.60e-24,19;UBERON:0008835,4.38e-21,22;UBERON:0003894,4.38e-21,22;UBERON:0009854,3.39e-20,23;UBERON:0007499,1.25e-18,25;UBERON:0009497,1.25e-18,25;UBERON:0000015,1.25e-18,25;UBERON:0002423,1.25e-18,25;UBERON:0006235,1.25e-18,25;UBERON:0004161,1.25e-18,25;UBERON:0009856,6.16e-18,26;UBERON:0002365,3.88e-15,31;UBERON:0002330,3.88e-15,31;UBERON:0002368,1.80e-13,35;UBERON:0000949,1.37e-10,45;UBERON:0003929,6.69e-09,54;UBERON:0005172,6.69e-09,54;UBERON:0005173,6.69e-09,54;UBERON:0002530,3.49e-08,59;UBERON:0002417,4.71e-08,60;UBERON:0000916,4.71e-08,60 | |||
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|short_description=p@chr12:18395878..18395884,+ | |short_description=p@chr12:18395878..18395884,+ | ||
}} | }} |
Latest revision as of 07:20, 24 July 2015
Short description: | p@chr12:18395878..18395884, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:18395878..18395884, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.30e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.60e-24 | 19 |
digestive gland | 2.60e-24 | 19 |
liver bud | 2.60e-24 | 19 |
hepatic diverticulum | 4.38e-21 | 22 |
liver primordium | 4.38e-21 | 22 |
digestive tract diverticulum | 3.39e-20 | 23 |
epithelial sac | 1.25e-18 | 25 |
epithelium of foregut-midgut junction | 1.25e-18 | 25 |
anatomical boundary | 1.25e-18 | 25 |
hepatobiliary system | 1.25e-18 | 25 |
foregut-midgut junction | 1.25e-18 | 25 |
septum transversum | 1.25e-18 | 25 |
sac | 6.16e-18 | 26 |
exocrine gland | 3.88e-15 | 31 |
exocrine system | 3.88e-15 | 31 |
endocrine gland | 1.80e-13 | 35 |
endocrine system | 1.37e-10 | 45 |
gut epithelium | 6.69e-09 | 54 |
abdomen element | 6.69e-09 | 54 |
abdominal segment element | 6.69e-09 | 54 |
gland | 3.49e-08 | 59 |
abdominal segment of trunk | 4.71e-08 | 60 |
abdomen | 4.71e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.05e-15 | 2 |