FFCP PHASE1:Hg19::chr12:132475501..132475504,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:132475501..132475504,+ | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr12:132475501..132475504,+ | |description=CAGE_peak_at_chr12:132475501..132475504,+ | ||
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|ontology_enrichment_celltype=CL:0000128!1.99e-32!7;CL:0000126!1.99e-32!7;CL:0000127!1.99e-32!7;CL:0002453!1.99e-32!7;CL:0002603!7.50e-28!3;CL:0000064!8.22e-28!3;CL:0005012!8.22e-28!3;CL:0000067!8.22e-28!3;CL:0002304!8.22e-28!3;CL:0002319!3.60e-26!25;CL:0000133!1.37e-19!59;CL:0000243!7.43e-19!15;CL:0000125!7.43e-19!15;CL:0000030!7.43e-19!15;CL:0000339!7.43e-19!15;CL:0000095!7.86e-17!17;CL:0000123!7.86e-17!17;CL:0000221!4.70e-16!71;CL:0000540!1.52e-14!6;CL:0000031!1.52e-14!6;CL:0000404!1.52e-14!6;CL:0000047!4.79e-11!8;CL:0000306!2.08e-10!4;CL:0002222!2.08e-10!4;CL:0002224!2.08e-10!4;CL:0000075!2.03e-08!27;CL:0000333!3.44e-07!41 | |ontology_enrichment_celltype=CL:0000128!1.99e-32!7;CL:0000126!1.99e-32!7;CL:0000127!1.99e-32!7;CL:0002453!1.99e-32!7;CL:0002603!7.50e-28!3;CL:0000064!8.22e-28!3;CL:0005012!8.22e-28!3;CL:0000067!8.22e-28!3;CL:0002304!8.22e-28!3;CL:0002319!3.60e-26!25;CL:0000133!1.37e-19!59;CL:0000243!7.43e-19!15;CL:0000125!7.43e-19!15;CL:0000030!7.43e-19!15;CL:0000339!7.43e-19!15;CL:0000095!7.86e-17!17;CL:0000123!7.86e-17!17;CL:0000221!4.70e-16!71;CL:0000540!1.52e-14!6;CL:0000031!1.52e-14!6;CL:0000404!1.52e-14!6;CL:0000047!4.79e-11!8;CL:0000306!2.08e-10!4;CL:0002222!2.08e-10!4;CL:0002224!2.08e-10!4;CL:0000075!2.03e-08!27;CL:0000333!3.44e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000306;6.60e-50;4!CL:0002222;6.60e-50;4!CL:0002224;6.60e-50;4!CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002319;2.06e-08;25!CL:0000075;2.22e-08;27 | |ontology_enrichment_celltype_v019=CL:0000306;6.60e-50;4!CL:0002222;6.60e-50;4!CL:0002224;6.60e-50;4!CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002319;2.06e-08;25!CL:0000075;2.22e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.60e-50,4;CL:0002222,6.60e-50,4;CL:0002224,6.60e-50,4;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:0002319,2.06e-08,25;CL:0000075,2.22e-08,27;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.44e-09;6 | |ontology_enrichment_development_v019=CL:0000031;1.44e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!8.22e-28!3;UBERON:0001775!8.22e-28!3;UBERON:0000488!4.95e-21!4;UBERON:0007625!7.52e-21!11;UBERON:0001801!2.28e-16!14;UBERON:0002037!3.00e-14!6;UBERON:0006215!3.00e-14!6;UBERON:0002203!3.14e-14!6;UBERON:0001768!3.14e-14!6;UBERON:0000924!6.03e-14!173;UBERON:0006601!6.03e-14!173;UBERON:0001017!1.04e-13!82;UBERON:0005743!5.36e-13!86;UBERON:0004121!1.30e-12!169;UBERON:0002346!2.12e-12!90;UBERON:0000019!4.95e-12!19;UBERON:0000047!4.95e-12!19;UBERON:0004088!4.95e-12!19;UBERON:0003072!4.95e-12!19;UBERON:0003071!4.95e-12!19;UBERON:0004128!4.95e-12!19;UBERON:0000033!5.52e-12!123;UBERON:0000073!1.31e-11!94;UBERON:0001016!1.31e-11!94;UBERON:0000970!2.01e-11!20;UBERON:0000153!2.51e-11!129;UBERON:0007811!2.51e-11!129;UBERON:0003075!6.50e-11!86;UBERON:0007284!6.50e-11!86;UBERON:0002104!7.15e-11!21;UBERON:0001456!7.15e-11!21;UBERON:0010077!2.08e-10!4;UBERON:0005389!2.08e-10!4;UBERON:0000484!2.08e-10!4;UBERON:0002546!2.08e-10!4;UBERON:0000965!2.08e-10!4;UBERON:0001803!2.08e-10!4;UBERON:0003073!2.08e-10!4;UBERON:0005426!2.08e-10!4;UBERON:0000020!6.50e-10!23;UBERON:0002680!1.11e-09!9;UBERON:0001895!1.11e-09!9;UBERON:0010092!1.11e-09!9;UBERON:0001032!1.71e-09!24;UBERON:0004456!1.71e-09!24;UBERON:0000955!4.05e-09!69;UBERON:0006238!4.05e-09!69;UBERON:0003056!2.11e-08!61;UBERON:0002200!5.34e-08!11;UBERON:0006876!5.34e-08!11;UBERON:0005085!7.95e-08!29;UBERON:0004733!2.22e-07!12;UBERON:0002028!2.22e-07!12;UBERON:0007277!2.22e-07!12;UBERON:0004732!7.56e-07!13 | |ontology_enrichment_uberon=UBERON:0001778!8.22e-28!3;UBERON:0001775!8.22e-28!3;UBERON:0000488!4.95e-21!4;UBERON:0007625!7.52e-21!11;UBERON:0001801!2.28e-16!14;UBERON:0002037!3.00e-14!6;UBERON:0006215!3.00e-14!6;UBERON:0002203!3.14e-14!6;UBERON:0001768!3.14e-14!6;UBERON:0000924!6.03e-14!173;UBERON:0006601!6.03e-14!173;UBERON:0001017!1.04e-13!82;UBERON:0005743!5.36e-13!86;UBERON:0004121!1.30e-12!169;UBERON:0002346!2.12e-12!90;UBERON:0000019!4.95e-12!19;UBERON:0000047!4.95e-12!19;UBERON:0004088!4.95e-12!19;UBERON:0003072!4.95e-12!19;UBERON:0003071!4.95e-12!19;UBERON:0004128!4.95e-12!19;UBERON:0000033!5.52e-12!123;UBERON:0000073!1.31e-11!94;UBERON:0001016!1.31e-11!94;UBERON:0000970!2.01e-11!20;UBERON:0000153!2.51e-11!129;UBERON:0007811!2.51e-11!129;UBERON:0003075!6.50e-11!86;UBERON:0007284!6.50e-11!86;UBERON:0002104!7.15e-11!21;UBERON:0001456!7.15e-11!21;UBERON:0010077!2.08e-10!4;UBERON:0005389!2.08e-10!4;UBERON:0000484!2.08e-10!4;UBERON:0002546!2.08e-10!4;UBERON:0000965!2.08e-10!4;UBERON:0001803!2.08e-10!4;UBERON:0003073!2.08e-10!4;UBERON:0005426!2.08e-10!4;UBERON:0000020!6.50e-10!23;UBERON:0002680!1.11e-09!9;UBERON:0001895!1.11e-09!9;UBERON:0010092!1.11e-09!9;UBERON:0001032!1.71e-09!24;UBERON:0004456!1.71e-09!24;UBERON:0000955!4.05e-09!69;UBERON:0006238!4.05e-09!69;UBERON:0003056!2.11e-08!61;UBERON:0002200!5.34e-08!11;UBERON:0006876!5.34e-08!11;UBERON:0005085!7.95e-08!29;UBERON:0004733!2.22e-07!12;UBERON:0002028!2.22e-07!12;UBERON:0007277!2.22e-07!12;UBERON:0004732!7.56e-07!13 | ||
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|short_description=p@chr12:132475501..132475504,+ | |short_description=p@chr12:132475501..132475504,+ | ||
}} | }} |
Latest revision as of 06:49, 24 July 2015
Short description: | p@chr12:132475501..132475504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:132475501..132475504, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.60e-50 | 4 |
vertebrate lens cell | 6.60e-50 | 4 |
lens epithelial cell | 6.60e-50 | 4 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
neural cell | 2.06e-08 | 25 |
columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 6.60e-50 | 4 |
transparent eye structure | 6.60e-50 | 4 |
simple cuboidal epithelium | 6.60e-50 | 4 |
cranial placode | 6.60e-50 | 4 |
lens of camera-type eye | 6.60e-50 | 4 |
epithelium of lens | 6.60e-50 | 4 |
lens placode | 6.60e-50 | 4 |
lens vesicle | 6.60e-50 | 4 |
external ectoderm | 1.26e-25 | 8 |
pigment epithelium of eye | 5.63e-19 | 11 |
anterior segment of eyeball | 3.66e-15 | 14 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
eye | 1.77e-10 | 21 |
visual system | 1.77e-10 | 21 |
face | 4.74e-10 | 22 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
ectodermal placode | 1.99e-07 | 31 |